GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G114748	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.82783 x 10^-1	9	7	8	15	56.25%	65.22%	16	23	RefGen V2	χ2 p-value for B73 x Mo17: '.3767473' χ2 p-value for Mo17 x B73: '.882783' Biased in favor of strain: ''
GRMZM2G114748	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.37094 x 10^-1	28	16	23	19	63.64%	45.24%	44	42	RefGen V2	χ2 p-value for B73 x Mo17: '.0704404' χ2 p-value for Mo17 x B73: '.537094' Biased in favor of strain: ''
GRMZM2G114739	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1770	848	1731	688	67.61%	28.44%	2618	2419	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114739	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1100	185	603	305	85.60%	33.59%	1285	908	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114707	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.127091 x 10^-1	30	12	21	31	71.43%	59.62%	42	52	RefGen V2	χ2 p-value for B73 x Mo17: '.5127091' χ2 p-value for Mo17 x B73: '.2807486' Biased in favor of strain: ''
GRMZM2G114707	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.787937 x 10^-1	20	35	22	21	36.36%	48.84%	55	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0431144' χ2 p-value for Mo17 x B73: '.8787937' Biased in favor of strain: ''
GRMZM2G114692	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.98 x 10^-27	540	217	440	174	71.33%	28.34%	757	614	RefGen V2	χ2 p-value for B73 x Mo17: '7.98e-32' χ2 p-value for Mo17 x B73: '6.98e-27' Biased in favor of strain: 'B73'
GRMZM2G114692	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.1485 x 10^-3	367	139	225	228	72.53%	50.33%	506	453	RefGen V2	χ2 p-value for B73 x Mo17: '.0051485' χ2 p-value for Mo17 x B73: '1.64e-13' Biased in favor of strain: 'B73'
GRMZM2G114688	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.694562 x 10^-1	13	21	17	24	38.24%	58.54%	34	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0004368' χ2 p-value for Mo17 x B73: '.2694562' Biased in favor of strain: ''
GRMZM2G114688	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.040842 x 10^-1	36	26	32	16	58.06%	33.33%	62	48	RefGen V2	χ2 p-value for B73 x Mo17: '.2040842' χ2 p-value for Mo17 x B73: '.0209213' Biased in favor of strain: ''
GRMZM2G114680	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	0	0	50.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G114680	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G114675	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	2	100.00%	66.67%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G114675	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.44454 x 10^-1	389	332	450	432	53.95%	48.98%	721	882	RefGen V2	χ2 p-value for B73 x Mo17: '.0337714' χ2 p-value for Mo17 x B73: '.544454' Biased in favor of strain: ''
GRMZM2G114673	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	5	10	6	44.44%	37.50%	9	16	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G114673	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		16	0	9	0	100.00%	0.00%	16	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0046779' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM2G114667	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.54 x 10^-7	135	23	52	21	85.44%	28.77%	158	73	RefGen V2	χ2 p-value for B73 x Mo17: '5.54e-07' χ2 p-value for Mo17 x B73: '6.46e-12' Biased in favor of strain: 'B73'
GRMZM2G114667	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.28 x 10^-5	151	89	169	66	62.92%	28.09%	240	235	RefGen V2	χ2 p-value for B73 x Mo17: '.0000628' χ2 p-value for Mo17 x B73: '1.83e-11' Biased in favor of strain: 'B73'
GRMZM2G114650	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.638318 x 10^-1	62	73	69	67	45.93%	49.26%	135	136	RefGen V2	χ2 p-value for B73 x Mo17: '.3437768' χ2 p-value for Mo17 x B73: '.8638318' Biased in favor of strain: ''
GRMZM2G114650	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.376598 x 10^-1	60	50	31	52	54.55%	62.65%	110	83	RefGen V2	χ2 p-value for B73 x Mo17: '.0069997' χ2 p-value for Mo17 x B73: '.4376598' Biased in favor of strain: ''
GRMZM2G114634	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.8543 x 10^-3	1822	811	1062	1698	69.20%	61.52%	2633	2760	RefGen V2	χ2 p-value for B73 x Mo17: '.0058543' χ2 p-value for Mo17 x B73: '9.82e-09' Biased in favor of strain: 'B73'
GRMZM2G114634	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.1 x 10^-7	968	595	752	568	61.93%	43.03%	1563	1320	RefGen V2	χ2 p-value for B73 x Mo17: '3.92e-21' χ2 p-value for Mo17 x B73: '4.10e-07' Biased in favor of strain: 'B73'
GRMZM2G114619	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	10	15	7	17	40.00%	70.83%	25	24	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0412268' Biased in favor of strain: ''
GRMZM2G114619	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G114617	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.59317 x 10^-2	25	3	22	27	89.29%	55.10%	28	49	RefGen V2	χ2 p-value for B73 x Mo17: '.0111181' χ2 p-value for Mo17 x B73: '.0859317' Biased in favor of strain: ''
GRMZM2G114617	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.31144 x 10^-2	35	20	55	14	63.64%	20.29%	55	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0431144' χ2 p-value for Mo17 x B73: '7.98e-07' Biased in favor of strain: 'B73'
GRMZM2G114613	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.682351 x 10^-1	109	75	95	101	59.24%	51.53%	184	196	RefGen V2	χ2 p-value for B73 x Mo17: '.0121928' χ2 p-value for Mo17 x B73: '.6682351' Biased in favor of strain: ''
GRMZM2G114613	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.598937 x 10^-1	289	136	114	254	68.00%	69.02%	425	368	RefGen V2	χ2 p-value for B73 x Mo17: '.5598937' χ2 p-value for Mo17 x B73: '.3378753' Biased in favor of strain: ''
GRMZM2G114584	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	5	3	50.00%	37.50%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: ''
GRMZM2G114584	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	1	2	66.67%	66.67%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G114578	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	3	3	3	66.67%	50.00%	9	6	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G114578	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		68	24	0	5	73.91%	100.00%	92	5	RefGen V2	χ2 p-value for B73 x Mo17: '.1403796' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G114575	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	4	14	87.50%	77.78%	8	18	RefGen V2	χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.3173106' Biased in favor of strain: ''
GRMZM2G114575	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.814974 x 10^-1	23	22	24	32	51.11%	57.14%	45	56	RefGen V2	χ2 p-value for B73 x Mo17: '.8814974' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: ''
GRMZM2G114570	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.16 x 10^-8	629	345	612	428	64.58%	41.15%	974	1040	RefGen V2	χ2 p-value for B73 x Mo17: '9.04e-20' χ2 p-value for Mo17 x B73: '1.16e-08' Biased in favor of strain: 'B73'
GRMZM2G114570	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.74329 x 10^-2	578	237	322	545	70.92%	62.86%	815	867	RefGen V2	χ2 p-value for B73 x Mo17: '.0099998' χ2 p-value for Mo17 x B73: '.0174329' Biased in favor of strain: ''
GRMZM2G114560	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	730	47	384	103	93.95%	21.15%	777	487	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114560	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8 x 10^-8	166	13	73	19	92.74%	20.65%	179	92	RefGen V2	χ2 p-value for B73 x Mo17: '2.77e-30' χ2 p-value for Mo17 x B73: '1.80e-08' Biased in favor of strain: 'B73'
GRMZM2G114557	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.13 x 10^-16	588	336	688	411	63.64%	37.40%	924	1099	RefGen V2	χ2 p-value for B73 x Mo17: '1.13e-16' χ2 p-value for Mo17 x B73: '6.51e-17' Biased in favor of strain: 'B73'
GRMZM2G114557	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.05 x 10^-18	321	43	199	140	88.19%	41.30%	364	339	RefGen V2	χ2 p-value for B73 x Mo17: '3.05e-18' χ2 p-value for Mo17 x B73: '3.83e-23' Biased in favor of strain: 'B73'
GRMZM2G114552	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	0	0	66.67%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G114552	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5265	2160	9175	2529	70.91%	21.61%	7425	11704	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114550	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	6	1	2	53.85%	66.67%	13	3	RefGen V2	χ2 p-value for B73 x Mo17: '.7815113' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G114550	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	0	2	60.00%	100.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G114513	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.476131 x 10^-1	77	39	62	100	66.38%	61.73%	116	162	RefGen V2	χ2 p-value for B73 x Mo17: '.9476131' χ2 p-value for Mo17 x B73: '.1824222' Biased in favor of strain: ''
GRMZM2G114513	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.42 x 10^-6	166	89	86	31	65.10%	26.50%	255	117	RefGen V2	χ2 p-value for B73 x Mo17: '1.42e-06' χ2 p-value for Mo17 x B73: '3.68e-07' Biased in favor of strain: 'B73'
GRMZM2G114469	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.790997 x 10^-1	24	28	50	39	46.15%	43.82%	52	89	RefGen V2	χ2 p-value for B73 x Mo17: '.5790997' χ2 p-value for Mo17 x B73: '.2436154' Biased in favor of strain: ''
GRMZM2G114469	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.728577 x 10^-1	16	19	20	31	45.71%	60.78%	35	51	RefGen V2	χ2 p-value for B73 x Mo17: '.0085501' χ2 p-value for Mo17 x B73: '.3728577' Biased in favor of strain: ''
GRMZM2G114459	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.082404 x 10^-1	402	199	281	407	66.89%	59.16%	601	688	RefGen V2	χ2 p-value for B73 x Mo17: '.9082404' χ2 p-value for Mo17 x B73: '.0000293' Biased in favor of strain: ''
GRMZM2G114459	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.838398 x 10^-1	222	237	184	217	48.37%	54.11%	459	401	RefGen V2	χ2 p-value for B73 x Mo17: '.4838398' χ2 p-value for Mo17 x B73: '.0993647' Biased in favor of strain: ''
GRMZM2G114432	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	2	6	66.67%	75.00%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G114432	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	2	6	25.00%	75.00%	4	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: ''
GRMZM2G114394	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.100164 x 10^-1	343	192	204	299	64.11%	59.44%	535	503	RefGen V2	χ2 p-value for B73 x Mo17: '.2100164' χ2 p-value for Mo17 x B73: '.0005891' Biased in favor of strain: ''
GRMZM2G114394	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.85 x 10^-15	900	596	937	524	60.16%	35.87%	1496	1461	RefGen V2	χ2 p-value for B73 x Mo17: '3.85e-15' χ2 p-value for Mo17 x B73: '3.26e-27' Biased in favor of strain: 'B73'
GRMZM2G114356	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	1.075 x 10^-4	212	0	0	15	100.00%	100.00%	212	15	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: ''
GRMZM2G114356	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	1.43059 x 10^-2	676	0	0	12	100.00%	100.00%	676	12	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G114337	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1043	74	484	249	93.38%	33.97%	1117	733	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114337	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	762	240	699	322	76.05%	31.54%	1002	1021	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.97e-32' Biased in favor of strain: 'B73'
GRMZM2G114325	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.59011 x 10^-1	38	25	25	36	60.32%	59.02%	63	61	RefGen V2	χ2 p-value for B73 x Mo17: '.1014538' χ2 p-value for Mo17 x B73: '.159011' Biased in favor of strain: ''
GRMZM2G114325	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.859615 x 10^-1	145	74	78	118	66.21%	60.20%	219	196	RefGen V2	χ2 p-value for B73 x Mo17: '.8859615' χ2 p-value for Mo17 x B73: '.0549476' Biased in favor of strain: ''
GRMZM2G114322	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		21	0	6	2	100.00%	25.00%	21	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0011938' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: ''
GRMZM2G114322	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.17 x 10^-5	86	40	143	36	68.25%	20.11%	126	179	RefGen V2	χ2 p-value for B73 x Mo17: '.0000417' χ2 p-value for Mo17 x B73: '1.27e-15' Biased in favor of strain: 'B73'
GRMZM2G114315	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.253157 x 10^-1	70	53	85	61	56.91%	41.78%	123	146	RefGen V2	χ2 p-value for B73 x Mo17: '.1253157' χ2 p-value for Mo17 x B73: '.0470051' Biased in favor of strain: ''
GRMZM2G114315	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.44519 x 10^-1	27	7	18	34	79.41%	65.38%	34	52	RefGen V2	χ2 p-value for B73 x Mo17: '.11492' χ2 p-value for Mo17 x B73: '.844519' Biased in favor of strain: ''
GRMZM2G114312	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.256709 x 10^-1	249	150	166	364	62.41%	68.68%	399	530	RefGen V2	χ2 p-value for B73 x Mo17: '.0709994' χ2 p-value for Mo17 x B73: '.3256709' Biased in favor of strain: ''
GRMZM2G114312	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.49726 x 10^-2	377	328	386	289	53.48%	42.81%	705	675	RefGen V2	χ2 p-value for B73 x Mo17: '.0649726' χ2 p-value for Mo17 x B73: '.0001888' Biased in favor of strain: ''
GRMZM2G114276	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1088	500	981	407	68.51%	29.32%	1588	1388	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114276	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.062797 x 10^-1	82	20	44	69	80.39%	61.06%	102	113	RefGen V2	χ2 p-value for B73 x Mo17: '.0032763' χ2 p-value for Mo17 x B73: '.2062797' Biased in favor of strain: ''
GRMZM2G114241	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	4	4		50.00%	0	8	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G114241	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	2	3	33.33%	60.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: ''
GRMZM2G114234	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.65814 x 10^-2	167	86	139	111	66.01%	44.40%	253	250	RefGen V2	χ2 p-value for B73 x Mo17: '3.54e-07' χ2 p-value for Mo17 x B73: '.0765814' Biased in favor of strain: ''
GRMZM2G114234	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.4 x 10^-4	484	179	270	299	73.00%	52.55%	663	569	RefGen V2	χ2 p-value for B73 x Mo17: '.00054' χ2 p-value for Mo17 x B73: '9.06e-13' Biased in favor of strain: 'B73'
GRMZM2G114232	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	0	36	0.00%	100.00%	5	36	RefGen V2	χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM2G114232	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.498174 x 10^-1	29	44	22	15	39.73%	40.54%	73	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0791538' χ2 p-value for Mo17 x B73: '.2498174' Biased in favor of strain: ''
GRMZM2G114220	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.44704 x 10^-2	97	72	70	48	57.40%	40.68%	169	118	RefGen V2	χ2 p-value for B73 x Mo17: '.0544704' χ2 p-value for Mo17 x B73: '.0428402' Biased in favor of strain: ''
GRMZM2G114220	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.129808 x 10^-1	94	49	50	84	65.73%	62.69%	143	134	RefGen V2	χ2 p-value for B73 x Mo17: '.8129808' χ2 p-value for Mo17 x B73: '.3283929' Biased in favor of strain: ''
GRMZM2G114192	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.55628 x 10^-1	324	169	275	585	65.72%	68.02%	493	860	RefGen V2	χ2 p-value for B73 x Mo17: '.655628' χ2 p-value for Mo17 x B73: '.3987122' Biased in favor of strain: ''
GRMZM2G114192	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.33 x 10^-10	351	537	294	490	39.53%	62.50%	888	784	RefGen V2	χ2 p-value for B73 x Mo17: '4.33e-10' χ2 p-value for Mo17 x B73: '2.56e-12' Biased in favor of strain: 'Mo17'
GRMZM2G114190	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.971465 x 10^-1	138	93	111	96	59.74%	46.38%	231	207	RefGen V2	χ2 p-value for B73 x Mo17: '.0030686' χ2 p-value for Mo17 x B73: '.2971465' Biased in favor of strain: ''
GRMZM2G114190	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.064963 x 10^-1	56	25	24	51	69.14%	68.00%	81	75	RefGen V2	χ2 p-value for B73 x Mo17: '.6373812' χ2 p-value for Mo17 x B73: '.8064963' Biased in favor of strain: ''
GRMZM2G114184	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.29949 x 10^-1	11	2	8	9	84.62%	52.94%	13	17	RefGen V2	χ2 p-value for B73 x Mo17: '.1698144' χ2 p-value for Mo17 x B73: '.229949' Biased in favor of strain: ''
GRMZM2G114184	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	2	100.00%	100.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G114182	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	518	110	397	88	82.48%	18.14%	628	485	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114182	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.94 x 10^-4	965	746	553	1335	56.40%	70.71%	1711	1888	RefGen V2	χ2 p-value for B73 x Mo17: '2.08e-19' χ2 p-value for Mo17 x B73: '.000194' Biased in favor of strain: 'Mo17'
GRMZM2G114172	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.65898 x 10^-2	205	243	161	385	45.76%	70.51%	448	546	RefGen V2	χ2 p-value for B73 x Mo17: '6.13e-21' χ2 p-value for Mo17 x B73: '.0565898' Biased in favor of strain: ''
GRMZM2G114172	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.22 x 10^-6	512	375	452	277	57.72%	38.00%	887	729	RefGen V2	χ2 p-value for B73 x Mo17: '4.22e-06' χ2 p-value for Mo17 x B73: '9.08e-11' Biased in favor of strain: 'B73'
GRMZM2G114153	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	1	4	0.00%	80.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G114153	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	6	0	0	0.00%		6	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G114131	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.09 x 10^-9	234	45	166	80	83.87%	32.52%	279	246	RefGen V2	χ2 p-value for B73 x Mo17: '1.09e-09' χ2 p-value for Mo17 x B73: '6.54e-30' Biased in favor of strain: 'B73'
GRMZM2G114131	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.901806 x 10^-1	127	111	115	111	53.36%	49.12%	238	226	RefGen V2	χ2 p-value for B73 x Mo17: '.2996772' χ2 p-value for Mo17 x B73: '.7901806' Biased in favor of strain: ''
GRMZM2G114126	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1604	835	1402	829	65.76%	37.16%	2439	2231	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '7.22e-34' Biased in favor of strain: 'B73'
GRMZM2G114126	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2709	831	1691	1652	76.53%	49.42%	3540	3343	RefGen V2	χ2 p-value for B73 x Mo17: '1.53e-35' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114119	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3743 x 10^-3	139	39	88	112	78.09%	56.00%	178	200	RefGen V2	χ2 p-value for B73 x Mo17: '.0012252' χ2 p-value for Mo17 x B73: '.0013743' Biased in favor of strain: 'B73'
GRMZM2G114119	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.95918 x 10^-2	31	10	11	23	75.61%	67.65%	41	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0010394' χ2 p-value for Mo17 x B73: '.0395918' Biased in favor of strain: ''
GRMZM2G114113	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.6681 x 10^-2	702	587	641	577	54.46%	47.37%	1289	1218	RefGen V2	χ2 p-value for B73 x Mo17: '.0013595' χ2 p-value for Mo17 x B73: '.066681' Biased in favor of strain: ''
GRMZM2G114113	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.753994 x 10^-1	12	12	22	55	50.00%	71.43%	24	77	RefGen V2	χ2 p-value for B73 x Mo17: '.0832594' χ2 p-value for Mo17 x B73: '.3753994' Biased in favor of strain: ''
GRMZM2G114107	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.017785 x 10^-1	237	152	117	224	60.93%	65.69%	389	341	RefGen V2	χ2 p-value for B73 x Mo17: '.0162982' χ2 p-value for Mo17 x B73: '.7017785' Biased in favor of strain: ''
GRMZM2G114107	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.53 x 10^-6	308	195	251	159	61.23%	38.78%	503	410	RefGen V2	χ2 p-value for B73 x Mo17: '4.69e-07' χ2 p-value for Mo17 x B73: '5.53e-06' Biased in favor of strain: 'B73'
GRMZM2G114057	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1196	113	880	87	91.37%	9.00%	1309	967	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G114057	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	0	100.00%	0.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''

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