| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G115499 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.272594 x 10-1 | 73 | 60 | 43 | 41 | 54.89% | 48.81% | 133 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2596398' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: '' |
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| GRMZM2G115499 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G115491 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.086532 x 10-1 | 25 | 13 | 5 | 12 | 65.79% | 70.59% | 38 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9086532' χ2 p-value for Mo17 x B73: '.7316008' Biased in favor of strain: '' |
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| GRMZM2G115491 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.787937 x 10-1 | 16 | 24 | 21 | 22 | 40.00% | 51.16% | 40 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.8787937' Biased in favor of strain: '' |
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| GRMZM2G115481 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.036 x 10-4 | 0 | 18 | 7 | 27 | 0.00% | 79.41% | 18 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0006036' Biased in favor of strain: 'Mo17' |
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| GRMZM2G115481 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 1 | 11 | 0.00% | 91.67% | 4 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0661926' Biased in favor of strain: '' |
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| GRMZM2G115456 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.36455 x 10-2 | 106 | 36 | 68 | 92 | 74.65% | 57.50% | 142 | 160 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0436455' χ2 p-value for Mo17 x B73: '.0139063' Biased in favor of strain: '' |
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| GRMZM2G115456 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.013675 x 10-1 | 120 | 81 | 76 | 66 | 59.70% | 46.48% | 201 | 142 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0059441' χ2 p-value for Mo17 x B73: '.4013675' Biased in favor of strain: '' |
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| GRMZM2G115451 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 6 | 11 | 10 | 25.00% | 47.62% | 8 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: '' |
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| GRMZM2G115451 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 6 | 1 | 14.29% | 0 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G115442 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.02607 x 10-2 | 74 | 21 | 40 | 41 | 77.89% | 50.62% | 95 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0202607' χ2 p-value for Mo17 x B73: '.002183' Biased in favor of strain: '' |
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| GRMZM2G115442 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.10767 x 10-2 | 97 | 62 | 81 | 58 | 61.01% | 41.73% | 159 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0055086' χ2 p-value for Mo17 x B73: '.0510767' Biased in favor of strain: '' |
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| GRMZM2G115424 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.18605 x 10-1 | 125 | 115 | 134 | 115 | 52.08% | 46.18% | 240 | 249 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.518605' χ2 p-value for Mo17 x B73: '.2285602' Biased in favor of strain: '' |
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| GRMZM2G115424 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.223527 x 10-1 | 47 | 46 | 36 | 65 | 50.54% | 64.36% | 93 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009682' χ2 p-value for Mo17 x B73: '.6223527' Biased in favor of strain: '' |
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| GRMZM2G115422 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.11445 x 10-2 | 72 | 22 | 76 | 65 | 76.60% | 46.10% | 94 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0411445' χ2 p-value for Mo17 x B73: '2.21e-07' Biased in favor of strain: '' |
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| GRMZM2G115422 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-30 | 252 | 51 | 417 | 116 | 83.17% | 21.76% | 303 | 533 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.63e-31' χ2 p-value for Mo17 x B73: '7.46e-39' Biased in favor of strain: 'B73' |
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| GRMZM2G115420 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.536 x 10-4 | 184 | 106 | 206 | 136 | 63.45% | 39.77% | 290 | 342 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.64e-06' χ2 p-value for Mo17 x B73: '.0001536' Biased in favor of strain: 'B73' |
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| GRMZM2G115420 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.78 x 10-5 | 187 | 51 | 149 | 144 | 78.57% | 49.15% | 238 | 293 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000978' χ2 p-value for Mo17 x B73: '2.00e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G115398 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.059031 x 10-1 | 26 | 5 | 19 | 26 | 83.87% | 57.78% | 31 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0421554' χ2 p-value for Mo17 x B73: '.2059031' Biased in favor of strain: '' |
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| GRMZM2G115398 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.339937 x 10-1 | 65 | 49 | 47 | 25 | 57.02% | 34.72% | 114 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1339937' χ2 p-value for Mo17 x B73: '.0095219' Biased in favor of strain: '' |
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| GRMZM2G115372 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 545 | 133 | 473 | 83 | 80.38% | 14.93% | 678 | 556 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G115372 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.844 x 10-4 | 79 | 14 | 50 | 38 | 84.95% | 43.18% | 93 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001844' χ2 p-value for Mo17 x B73: '2.96e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G115357 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 2 | 32 | 16 | 77.78% | 33.33% | 9 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795075' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: '' |
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| GRMZM2G115357 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2326 | 850 | 1838 | 622 | 73.24% | 25.28% | 3176 | 2460 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G115352 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 11 | 0 | 6 | 15.38% | 100.00% | 13 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0125549' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G115352 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.698144 x 10-1 | 22 | 4 | 0 | 31 | 84.62% | 100.00% | 26 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1698144' χ2 p-value for Mo17 x B73: '.0000825' Biased in favor of strain: '' |
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| GRMZM2G115342 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2174 | 293 | 942 | 562 | 88.12% | 37.37% | 2467 | 1504 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G115342 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5044 | 1588 | 5068 | 1861 | 76.06% | 26.86% | 6632 | 6929 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G115329 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.03 x 10-22 | 1409 | 939 | 1685 | 1092 | 60.01% | 39.32% | 2348 | 2777 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.03e-22' χ2 p-value for Mo17 x B73: '2.24e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G115329 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 0 | 0 | 100.00% | 7 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G115304 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.992174 x 10-1 | 124 | 57 | 72 | 110 | 68.51% | 60.44% | 181 | 182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5992174' χ2 p-value for Mo17 x B73: '.0747354' Biased in favor of strain: '' |
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| GRMZM2G115304 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.09187 x 10-2 | 141 | 86 | 94 | 70 | 62.11% | 42.68% | 227 | 164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002618' χ2 p-value for Mo17 x B73: '.0609187' Biased in favor of strain: '' |
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| GRMZM2G115280 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.1172 x 10-3 | 94 | 51 | 62 | 35 | 64.83% | 36.08% | 145 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003557' χ2 p-value for Mo17 x B73: '.0061172' Biased in favor of strain: 'B73' |
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| GRMZM2G115280 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.149206 x 10-1 | 56 | 20 | 50 | 96 | 73.68% | 65.75% | 76 | 146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1943786' χ2 p-value for Mo17 x B73: '.8149206' Biased in favor of strain: '' |
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| GRMZM2G115257 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G115257 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 1 | 1 | 33.33% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G115255 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.95551 x 10-2 | 9 | 3 | 12 | 5 | 75.00% | 29.41% | 12 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: '' |
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| GRMZM2G115255 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 2 | 2 | 2 | 84.62% | 50.00% | 13 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1698144' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G115182 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.18115 x 10-2 | 38 | 8 | 35 | 27 | 82.61% | 43.55% | 46 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0218115' χ2 p-value for Mo17 x B73: '.0001127' Biased in favor of strain: '' |
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| GRMZM2G115182 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.65003 x 10-2 | 45 | 21 | 34 | 18 | 68.18% | 34.62% | 66 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0031349' χ2 p-value for Mo17 x B73: '.0265003' Biased in favor of strain: 'B73' |
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| GRMZM2G115156 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G115156 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G115152 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.06 x 10-5 | 69 | 70 | 55 | 232 | 49.64% | 80.84% | 139 | 287 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000206' χ2 p-value for Mo17 x B73: '3.54e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G115152 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.66 x 10-5 | 108 | 175 | 160 | 239 | 38.16% | 59.90% | 283 | 399 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000681' χ2 p-value for Mo17 x B73: '.0000766' Biased in favor of strain: 'Mo17' |
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| GRMZM2G115133 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 1 | 17 | 7 | 88.89% | 29.17% | 9 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0196307' χ2 p-value for Mo17 x B73: '.0412268' Biased in favor of strain: '' |
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| GRMZM2G115133 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G115131 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 9 | 4 | 100.00% | 30.77% | 8 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0060396' Biased in favor of strain: '' |
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| GRMZM2G115131 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 16 | 5 | 60.00% | 23.81% | 5 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.0163773' Biased in favor of strain: '' |
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| GRMZM2G115124 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 3 | 75.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G115124 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G115065 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 1 | 2 | 0.00% | 66.67% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G115065 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.657724 x 10-1 | 44 | 22 | 18 | 17 | 66.67% | 48.57% | 66 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067687' χ2 p-value for Mo17 x B73: '.8657724' Biased in favor of strain: '' |
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| GRMZM2G115013 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6 x 10-10 | 221 | 100 | 223 | 108 | 68.85% | 32.63% | 321 | 331 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.44e-11' χ2 p-value for Mo17 x B73: '2.60e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G115013 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.010131 x 10-1 | 106 | 42 | 48 | 136 | 71.62% | 73.91% | 148 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2010131' χ2 p-value for Mo17 x B73: '.0370563' Biased in favor of strain: '' |
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| GRMZM2G115000 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.37108 x 10-2 | 173 | 58 | 98 | 142 | 74.89% | 59.17% | 231 | 240 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008006' χ2 p-value for Mo17 x B73: '.0137108' Biased in favor of strain: '' |
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| GRMZM2G115000 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.77798 x 10-2 | 385 | 332 | 501 | 422 | 53.70% | 45.72% | 717 | 923 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0477798' χ2 p-value for Mo17 x B73: '.0093138' Biased in favor of strain: 'B73' |
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| GRMZM2G114998 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.907458 x 10-1 | 26 | 27 | 19 | 20 | 49.06% | 51.28% | 53 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8907458' χ2 p-value for Mo17 x B73: '.8727801' Biased in favor of strain: '' |
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| GRMZM2G114998 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G114992 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 1 | 20.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G114992 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.657123 x 10-1 | 28 | 17 | 7 | 4 | 62.22% | 36.36% | 45 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1010503' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G114988 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.861528 x 10-1 | 784 | 552 | 953 | 907 | 58.68% | 48.76% | 1336 | 1860 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.19e-10' χ2 p-value for Mo17 x B73: '.2861528' Biased in favor of strain: '' |
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| GRMZM2G114988 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.11 x 10-5 | 512 | 182 | 370 | 533 | 73.78% | 59.03% | 694 | 903 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000711' χ2 p-value for Mo17 x B73: '1.11e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G114954 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999774 x 10-1 | 16 | 8 | 3 | 15 | 66.67% | 83.33% | 24 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999774' χ2 p-value for Mo17 x B73: '.1336145' Biased in favor of strain: '' |
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| GRMZM2G114954 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.316006 x 10-1 | 16 | 18 | 16 | 25 | 47.06% | 60.98% | 34 | 41 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7316006' χ2 p-value for Mo17 x B73: '.1598537' Biased in favor of strain: '' |
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| GRMZM2G114911 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.55003 x 10-2 | 72 | 32 | 40 | 60 | 69.23% | 60.00% | 104 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000877' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G114911 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.601629 x 10-1 | 20 | 13 | 19 | 19 | 60.61% | 50.00% | 33 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4601629' χ2 p-value for Mo17 x B73: '.0292983' Biased in favor of strain: '' |
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| GRMZM2G114906 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.70093 x 10-2 | 646 | 282 | 304 | 508 | 69.61% | 62.56% | 928 | 812 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0570093' χ2 p-value for Mo17 x B73: '.0130845' Biased in favor of strain: '' |
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| GRMZM2G114906 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.294826 x 10-1 | 435 | 249 | 272 | 267 | 63.60% | 49.54% | 684 | 539 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.14e-12' χ2 p-value for Mo17 x B73: '.8294826' Biased in favor of strain: '' |
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| GRMZM2G114899 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.64 x 10-15 | 755 | 358 | 572 | 334 | 67.83% | 36.87% | 1113 | 906 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-32' χ2 p-value for Mo17 x B73: '2.64e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G114899 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.940317 x 10-1 | 45 | 21 | 40 | 68 | 68.18% | 62.96% | 66 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7940317' χ2 p-value for Mo17 x B73: '.4142159' Biased in favor of strain: '' |
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| GRMZM2G114893 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 1 | 100.00% | 50.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G114893 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.699118 x 10-1 | 7 | 23 | 17 | 26 | 23.33% | 60.47% | 30 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.003487' χ2 p-value for Mo17 x B73: '.1699118' Biased in favor of strain: '' |
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| GRMZM2G114888 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.01 x 10-8 | 370 | 176 | 318 | 189 | 67.77% | 37.28% | 546 | 507 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.02e-16' χ2 p-value for Mo17 x B73: '1.01e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G114888 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.85841 x 10-2 | 304 | 127 | 244 | 259 | 70.53% | 51.49% | 431 | 503 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0885841' χ2 p-value for Mo17 x B73: '5.20e-13' Biased in favor of strain: '' |
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| GRMZM2G114882 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.43429 x 10-1 | 8 | 8 | 6 | 15 | 50.00% | 71.43% | 16 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572923' χ2 p-value for Mo17 x B73: '.643429' Biased in favor of strain: '' |
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| GRMZM2G114882 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.35 x 10-11 | 87 | 20 | 90 | 14 | 81.31% | 13.46% | 107 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.35e-11' χ2 p-value for Mo17 x B73: '9.16e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G114873 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173105 x 10-1 | 193 | 132 | 171 | 190 | 59.38% | 52.63% | 325 | 361 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007152' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G114873 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1998 x 10-3 | 145 | 109 | 100 | 347 | 57.09% | 77.63% | 254 | 447 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011998' χ2 p-value for Mo17 x B73: '8.81e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G114861 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.494101 x 10-1 | 83 | 41 | 49 | 85 | 66.94% | 63.43% | 124 | 134 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9494101' χ2 p-value for Mo17 x B73: '.4271361' Biased in favor of strain: '' |
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| GRMZM2G114861 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6464 x 10-3 | 363 | 283 | 442 | 295 | 56.19% | 40.03% | 646 | 737 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016464' χ2 p-value for Mo17 x B73: '6.14e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G114850 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.52 x 10-6 | 25 | 1 | 54 | 8 | 96.15% | 12.90% | 26 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.52e-06' χ2 p-value for Mo17 x B73: '5.16e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G114850 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.43062 x 10-2 | 12 | 0 | 13 | 8 | 100.00% | 38.10% | 12 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0054785' Biased in favor of strain: '' |
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| GRMZM2G114816 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.76 x 10-14 | 331 | 36 | 103 | 67 | 90.19% | 39.41% | 367 | 170 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-21' χ2 p-value for Mo17 x B73: '4.76e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G114816 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 655 | 139 | 633 | 205 | 82.49% | 24.46% | 794 | 838 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G114793 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0669 x 10-3 | 1101 | 1260 | 901 | 1453 | 46.63% | 61.72% | 2361 | 2354 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010669' χ2 p-value for Mo17 x B73: '5.43e-30' Biased in favor of strain: 'Mo17' |
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| GRMZM2G114793 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.693121 x 10-1 | 2204 | 1235 | 1201 | 2497 | 64.09% | 67.52% | 3439 | 3698 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013382' χ2 p-value for Mo17 x B73: '.2693121' Biased in favor of strain: '' |
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| GRMZM2G114789 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999681 x 10-1 | 32 | 16 | 29 | 38 | 66.67% | 56.72% | 48 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999681' χ2 p-value for Mo17 x B73: '.0840353' Biased in favor of strain: '' |
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| GRMZM2G114789 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.78 x 10-20 | 351 | 108 | 286 | 106 | 76.47% | 27.04% | 459 | 392 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.10e-30' χ2 p-value for Mo17 x B73: '9.78e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G114778 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 7 | 1 | 2 | 30.00% | 66.67% | 10 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G114778 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999774 x 10-1 | 16 | 8 | 17 | 5 | 66.67% | 22.73% | 24 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999774' χ2 p-value for Mo17 x B73: '.0000123' Biased in favor of strain: '' |
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| GRMZM2G114775 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1497 | 307 | 1096 | 622 | 82.98% | 36.20% | 1804 | 1718 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G114775 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2503 | 1587 | 2549 | 1547 | 61.20% | 37.77% | 4090 | 4096 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G114772 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 6 | 0 | 2 | 62.50% | 100.00% | 16 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G114772 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.80834 x 10-2 | 10 | 1 | 10 | 7 | 90.91% | 41.18% | 11 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0880834' χ2 p-value for Mo17 x B73: '.0257819' Biased in favor of strain: '' |
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| GRMZM2G114758 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.88 x 10-6 | 1133 | 404 | 526 | 806 | 73.72% | 60.51% | 1537 | 1332 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.58e-09' χ2 p-value for Mo17 x B73: '1.88e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G114758 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.61 x 10-18 | 734 | 346 | 553 | 300 | 67.96% | 35.17% | 1080 | 853 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.61e-32' χ2 p-value for Mo17 x B73: '4.61e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G114756 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 4 | 0 | 100.00% | 0.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G114756 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G114751 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 0 | 5 | 55.56% | 100.00% | 9 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794898' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: '' |
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| GRMZM2G114751 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 0 | 2 | 55.56% | 100.00% | 9 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |