Displaying data sets 19001 - 19100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G39580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.8966 x 10-2 27 0 100.00% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1746 x 10-2 61 0 100.00% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.321739'
Avg. expression score for this sample: '38731.2'
Avg. expression score in LCM sample: '5196.65'
Tissue used: 'pure endosperm, no chalazal'
AT5G39570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.10777 x 10-1 5 0 1 5 100.00% 83.33% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.321739'
Avg. expression score for this sample: '27081.6'
Avg. expression score in LCM sample: '5196.65'
Tissue used: 'full endosperm'
AT5G39570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '17064.7'
Avg. embryo expression (LCM): '3165.05'
AT5G39570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 4 0.00% 80.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.14981'
Avg. expression score in LCM sample: '134.339'
Tissue used: 'pure endosperm, no chalazal'
AT5G39560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 4 100.00% 66.67% 1 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.41361'
Avg. expression score in LCM sample: '134.339'
Tissue used: 'full endosperm'
AT5G39560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.589686'
Avg. embryo expression (LCM): '0'
AT5G39560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1044 500 67.62% 1544 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2999 x 10-2 62 96 39.24% 158 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39550 VIM3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.9756 x 10-2 1 11 6 10 8.33% 62.50% 12 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.143959'
Avg. expression score for this sample: '43.5935'
Avg. expression score in LCM sample: '37.7883'
Tissue used: 'pure endosperm, no chalazal'
AT5G39550 VIM3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.00028 x 10-1 1 6 7 20 14.29% 74.07% 7 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.143959'
Avg. expression score for this sample: '27.3563'
Avg. expression score in LCM sample: '37.7883'
Tissue used: 'full endosperm'
AT5G39550 VIM3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.62855 x 10-1 24 23 0 7 51.06% 100.00% 47 7 TAIR8 Avg. embryo expression (dissected): '138.06'
Avg. embryo expression (LCM): '141.271'
AT5G39550 VIM3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39550 VIM3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-8 151 20 88.30% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39550 VIM3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.17 x 10-4 14 58 19.44% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.307178'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G39540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39535 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39535 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G39535 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39535 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39535 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.91226 x 10-1 70 52 28 74 57.38% 72.55% 122 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.366376'
Avg. expression score for this sample: '93.3055'
Avg. expression score in LCM sample: '39.1259'
Tissue used: 'pure endosperm, no chalazal'
AT5G39530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.36624 x 10-1 40 50 36 106 44.44% 74.65% 90 142 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.366376'
Avg. expression score for this sample: '64.2524'
Avg. expression score in LCM sample: '39.1259'
Tissue used: 'full endosperm'
AT5G39530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.3313 x 10-2 49 90 31 34 35.25% 52.31% 139 65 TAIR8 Avg. embryo expression (dissected): '146.272'
Avg. embryo expression (LCM): '73.2165'
AT5G39530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.5223 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.3719 x 10-2 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.6044 x 10-2 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.273343'
Avg. expression score for this sample: '9.50853'
Avg. expression score in LCM sample: '3.10126'
Tissue used: 'pure endosperm, no chalazal'
AT5G39520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.43017 x 10-1 8 2 1 7 80.00% 87.50% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.273343'
Avg. expression score for this sample: '29.2504'
Avg. expression score in LCM sample: '3.10126'
Tissue used: 'full endosperm'
AT5G39520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.22369'
Avg. embryo expression (LCM): '0'
AT5G39520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.2375 x 10-2 23 0 100.00% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39510 SGR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.39329 x 10-1 236 41 102 85 85.20% 45.45% 277 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '329.9'
Avg. expression score in LCM sample: '141.115'
Tissue used: 'pure endosperm, no chalazal'
AT5G39510 SGR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-7 400 43 138 251 90.29% 64.52% 443 389 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.7e-06'
Avg. expression score for this sample: '311.823'
Avg. expression score in LCM sample: '141.115'
Tissue used: 'full endosperm'
AT5G39510 SGR4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.84 x 10-4 115 43 21 24 72.78% 53.33% 158 45 TAIR8 Avg. embryo expression (dissected): '229.01'
Avg. embryo expression (LCM): '120.575'
AT5G39510 SGR4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.0 x 10-7 62 57 52.10% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39510 SGR4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.00972 x 10-1 141 62 69.46% 203 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39510 SGR4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7 x 10-21 411 26 94.05% 437 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39500 GNL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.10428 x 10-1 67 30 27 69 69.07% 71.88% 97 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002842'
Avg. expression score for this sample: '121.55'
Avg. expression score in LCM sample: '146.817'
Tissue used: 'pure endosperm, no chalazal'
AT5G39500 GNL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.12 x 10-3 196 54 87 225 78.40% 72.12% 250 312 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002842'
Avg. expression score for this sample: '184.797'
Avg. expression score in LCM sample: '146.817'
Tissue used: 'full endosperm'
AT5G39500 GNL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.411 x 10-2 60 26 13 8 69.77% 38.10% 86 21 TAIR8 Avg. embryo expression (dissected): '121.449'
Avg. embryo expression (LCM): '78.4785'
AT5G39500 GNL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.72982 x 10-1 40 8 83.33% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39500 GNL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.37676 x 10-1 647 251 72.05% 898 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39500 GNL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-14 659 81 89.05% 740 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39493 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39493 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.365'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39493 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G39493 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39493 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39493 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G39490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.399949'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G39480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39471 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39471 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.067'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39471 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 2 0 100.00% 0.00% 2 2 TAIR8 Avg. embryo expression (dissected): '1.26886'
Avg. embryo expression (LCM): '0'
AT5G39471 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39471 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39471 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.46255'
Avg. embryo expression (LCM): '0'
AT5G39470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.632984'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.169283'
Avg. embryo expression (LCM): '0'
AT5G39460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.80788 x 10-1 6 8 3 11 42.86% 78.57% 14 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.367299'
Avg. expression score for this sample: '125.72'
Avg. expression score in LCM sample: '68.845'
Tissue used: 'pure endosperm, no chalazal'
AT5G39450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.11888 x 10-1 30 10 7 31 75.00% 81.58% 40 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.367299'
Avg. expression score for this sample: '134.195'
Avg. expression score in LCM sample: '68.845'
Tissue used: 'full endosperm'
AT5G39450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 10 10 0 4 50.00% 100.00% 20 4 TAIR8 Avg. embryo expression (dissected): '112.357'
Avg. embryo expression (LCM): '69.4113'
AT5G39450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.91 x 10-4 39 1 97.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.15 x 10-4 67 5 93.06% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39440 SnRK1.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 2 2 0 83.33% 0.00% 12 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.800028'
Avg. expression score for this sample: '7.14409'
Avg. expression score in LCM sample: '2.98368'
Tissue used: 'pure endosperm, no chalazal'
AT5G39440 SnRK1.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.47527 x 10-1 2 2 7 9 50.00% 56.25% 4 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.800028'
Avg. expression score for this sample: '5.05102'
Avg. expression score in LCM sample: '2.98368'
Tissue used: 'full endosperm'