GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G116840	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.342867 x 10^-1	71	90	57	93	44.10%	62.00%	161	150	RefGen V2	χ2 p-value for B73 x Mo17: '.1342867' χ2 p-value for Mo17 x B73: '.0032886' Biased in favor of strain: ''
GRMZM2G116840	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.65 x 10^-8	17	85	25	158	16.67%	86.34%	102	183	RefGen V2	χ2 p-value for B73 x Mo17: '8.92e-27' χ2 p-value for Mo17 x B73: '1.65e-08' Biased in favor of strain: 'Mo17'
GRMZM2G116831	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.68693 x 10^-2	410	131	156	374	75.79%	70.57%	541	530	RefGen V2	χ2 p-value for B73 x Mo17: '6.82e-06' χ2 p-value for Mo17 x B73: '.0568693' Biased in favor of strain: ''
GRMZM2G116831	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05 x 10^-6	326	183	274	171	64.05%	38.43%	509	445	RefGen V2	χ2 p-value for B73 x Mo17: '2.32e-10' χ2 p-value for Mo17 x B73: '1.05e-06' Biased in favor of strain: 'B73'
GRMZM2G116812	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.12 x 10^-11	64	8	65	7	88.89%	9.72%	72	72	RefGen V2	χ2 p-value for B73 x Mo17: '4.12e-11' χ2 p-value for Mo17 x B73: '8.18e-12' Biased in favor of strain: 'B73'
GRMZM2G116812	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	0	1	50.00%	100.00%	6	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G116803	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.53478 x 10^-2	10	0	12	0	100.00%	0.00%	10	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: ''
GRMZM2G116803	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.828 x 10^-4	18	0	14	0	100.00%	0.00%	18	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: 'B73'
GRMZM2G116750	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	0	100.00%	0.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G116750	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	2	100.00%	50.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G116714	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	3	0	0	57.14%		7	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116714	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	1	0	75.00%	0.00%	4	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G116700	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.638561 x 10^-1	146	112	136	141	56.59%	50.90%	258	277	RefGen V2	χ2 p-value for B73 x Mo17: '.0342813' χ2 p-value for Mo17 x B73: '.7638561' Biased in favor of strain: ''
GRMZM2G116700	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.42931 x 10^-2	414	174	258	378	70.41%	59.43%	588	636	RefGen V2	χ2 p-value for B73 x Mo17: '.0542931' χ2 p-value for Mo17 x B73: '.0001091' Biased in favor of strain: ''
GRMZM2G116693	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.638316 x 10^-1	11	3	6	11	78.57%	64.71%	14	17	RefGen V2	χ2 p-value for B73 x Mo17: '.3447117' χ2 p-value for Mo17 x B73: '.8638316' Biased in favor of strain: ''
GRMZM2G116693	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	3	5	80.00%	62.50%	5	8	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G116689	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	2	1	33.33%	33.33%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G116689	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	2	2	50.00%	50.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G116685	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.711697 x 10^-1	44	13	29	49	77.19%	62.82%	57	78	RefGen V2	χ2 p-value for B73 x Mo17: '.0918296' χ2 p-value for Mo17 x B73: '.4711697' Biased in favor of strain: ''
GRMZM2G116685	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.160048 x 10^-1	133	139	101	74	48.90%	42.29%	272	175	RefGen V2	χ2 p-value for B73 x Mo17: '.7160048' χ2 p-value for Mo17 x B73: '.04125' Biased in favor of strain: ''
GRMZM2G116671	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	2	5	0.00%	71.43%	2	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G116671	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	0	1	100.00%	100.00%	5	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G116670	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.588884 x 10^-1	329	153	182	240	68.26%	56.87%	482	422	RefGen V2	χ2 p-value for B73 x Mo17: '.4588884' χ2 p-value for Mo17 x B73: '.0000197' Biased in favor of strain: ''
GRMZM2G116670	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.288343 x 10^-1	56	51	26	39	52.34%	60.00%	107	65	RefGen V2	χ2 p-value for B73 x Mo17: '.6288343' χ2 p-value for Mo17 x B73: '.1068637' Biased in favor of strain: ''
GRMZM2G116658	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.85 x 10^-4	232	128	164	108	64.44%	39.71%	360	272	RefGen V2	χ2 p-value for B73 x Mo17: '4.22e-08' χ2 p-value for Mo17 x B73: '.000685' Biased in favor of strain: 'B73'
GRMZM2G116658	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	2	7	80.00%	77.78%	5	9	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: ''
GRMZM2G116646	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	8.25 x 10^-5	75	1	0	31	98.68%	100.00%	76	31	RefGen V2	χ2 p-value for B73 x Mo17: '3.20e-09' χ2 p-value for Mo17 x B73: '.0000825' Biased in favor of strain: ''
GRMZM2G116646	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.5015 x 10^-2	70	44	35	55	61.40%	61.11%	114	90	RefGen V2	χ2 p-value for B73 x Mo17: '.0148867' χ2 p-value for Mo17 x B73: '.035015' Biased in favor of strain: ''
GRMZM2G116632	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	686	251	516	135	73.21%	20.74%	937	651	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116632	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116626	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	0		0.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116626	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	7	1	0	30.00%	0.00%	10	1	RefGen V2	χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G116620	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4769 x 10^-2	87	50	56	33	63.50%	37.08%	137	89	RefGen V2	χ2 p-value for B73 x Mo17: '.0015716' χ2 p-value for Mo17 x B73: '.014769' Biased in favor of strain: 'B73'
GRMZM2G116620	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.18 x 10^-6	114	20	46	34	85.07%	42.50%	134	80	RefGen V2	χ2 p-value for B73 x Mo17: '6.18e-06' χ2 p-value for Mo17 x B73: '4.53e-06' Biased in favor of strain: 'B73'
GRMZM2G116614	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.299399 x 10^-1	9	8	18	8	52.94%	30.77%	17	26	RefGen V2	χ2 p-value for B73 x Mo17: '.2299399' χ2 p-value for Mo17 x B73: '.0001032' Biased in favor of strain: ''
GRMZM2G116614	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.5288 x 10^-3	71	34	30	13	67.62%	30.23%	105	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0003052' χ2 p-value for Mo17 x B73: '.0095288' Biased in favor of strain: 'B73'
GRMZM2G116586	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.90222 x 10^-2	58	40	45	26	59.18%	36.62%	98	71	RefGen V2	χ2 p-value for B73 x Mo17: '.0690222' χ2 p-value for Mo17 x B73: '.0241405' Biased in favor of strain: ''
GRMZM2G116586	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.241759 x 10^-1	48	27	32	29	64.00%	47.54%	75	61	RefGen V2	χ2 p-value for B73 x Mo17: '.6241759' χ2 p-value for Mo17 x B73: '.001531' Biased in favor of strain: ''
GRMZM2G116584	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.59 x 10^-14	233	30	107	53	88.59%	33.12%	263	160	RefGen V2	χ2 p-value for B73 x Mo17: '4.59e-14' χ2 p-value for Mo17 x B73: '2.25e-19' Biased in favor of strain: 'B73'
GRMZM2G116584	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3 x 10^-29	772	275	714	346	73.73%	32.64%	1047	1060	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.27e-29' Biased in favor of strain: 'B73'
GRMZM2G116574	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.545395 x 10^-1	24	18	40	18	57.14%	31.03%	42	58	RefGen V2	χ2 p-value for B73 x Mo17: '.3545395' χ2 p-value for Mo17 x B73: '.0038679' Biased in favor of strain: ''
GRMZM2G116574	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.827649 x 10^-1	15	8	16	30	65.22%	65.22%	23	46	RefGen V2	χ2 p-value for B73 x Mo17: '.8827649' χ2 p-value for Mo17 x B73: '.8348271' Biased in favor of strain: ''
GRMZM2G116554	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	1	100.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G116554	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.115 x 10^-4	0	19	0	13	0.00%	100.00%	19	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: 'Mo17'
GRMZM2G116542	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.6494 x 10^-3	59	32	54	25	64.84%	31.65%	91	79	RefGen V2	χ2 p-value for B73 x Mo17: '.0046494' χ2 p-value for Mo17 x B73: '.0011033' Biased in favor of strain: 'B73'
GRMZM2G116542	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.08 x 10^-5	96	18	36	19	84.21%	34.55%	114	55	RefGen V2	χ2 p-value for B73 x Mo17: '.0000708' χ2 p-value for Mo17 x B73: '4.34e-07' Biased in favor of strain: 'B73'
GRMZM2G116538	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2163	84	1114	399	96.26%	26.37%	2247	1513	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116538	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.48 x 10^-9	183	14	66	13	92.89%	16.46%	197	79	RefGen V2	χ2 p-value for B73 x Mo17: '2.17e-33' χ2 p-value for Mo17 x B73: '2.48e-09' Biased in favor of strain: 'B73'
GRMZM2G116526	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.083652 x 10^-1	27	16	9	8	62.79%	47.06%	43	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0934478' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: ''
GRMZM2G116526	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.071006 x 10^-1	24	25	23	35	48.98%	60.34%	49	58	RefGen V2	χ2 p-value for B73 x Mo17: '.0086284' χ2 p-value for Mo17 x B73: '.3071006' Biased in favor of strain: ''
GRMZM2G116517	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.080874 x 10^-1	3029	1781	1798	3543	62.97%	66.34%	4810	5341	RefGen V2	χ2 p-value for B73 x Mo17: '5.49e-08' χ2 p-value for Mo17 x B73: '.6080874' Biased in favor of strain: ''
GRMZM2G116517	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.895993 x 10^-1	1943	1214	1268	1275	61.55%	50.14%	3157	2543	RefGen V2	χ2 p-value for B73 x Mo17: '1.71e-38' χ2 p-value for Mo17 x B73: '.8895993' Biased in favor of strain: ''
GRMZM2G116514	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.216236 x 10^-1	565	338	381	348	62.57%	47.74%	903	729	RefGen V2	χ2 p-value for B73 x Mo17: '4.22e-14' χ2 p-value for Mo17 x B73: '.2216236' Biased in favor of strain: ''
GRMZM2G116514	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2485	511	1132	858	82.94%	43.12%	2996	1990	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116491	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		48	0	0	0	100.00%		48	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116491	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.572992 x 10^-1	20	30	21	32	40.00%	60.38%	50	53	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1307971' Biased in favor of strain: ''
GRMZM2G116461	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.32 x 10^-4	12	0	33	0	100.00%	0.00%	12	33	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '9.22e-09' Biased in favor of strain: 'B73'
GRMZM2G116461	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116434	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.409121 x 10^-1	395	222	272	547	64.02%	66.79%	617	819	RefGen V2	χ2 p-value for B73 x Mo17: '.1630135' χ2 p-value for Mo17 x B73: '.9409121' Biased in favor of strain: ''
GRMZM2G116434	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.549452 x 10^-1	116	134	84	167	46.40%	66.53%	250	251	RefGen V2	χ2 p-value for B73 x Mo17: '.2549452' χ2 p-value for Mo17 x B73: '1.62e-07' Biased in favor of strain: ''
GRMZM2G116426	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G116426	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116386	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	21	113	50.00%	84.33%	4	134	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.0000144' Biased in favor of strain: ''
GRMZM2G116386	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.482131 x 10^-1	8	4	13	94	66.67%	87.85%	12	107	RefGen V2	χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '4.86e-15' Biased in favor of strain: ''
GRMZM2G116376	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.160316 x 10^-1	192	62	67	50	75.59%	42.74%	254	117	RefGen V2	χ2 p-value for B73 x Mo17: '3.44e-16' χ2 p-value for Mo17 x B73: '.1160316' Biased in favor of strain: ''
GRMZM2G116376	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.11 x 10^-19	472	64	206	169	88.06%	45.07%	536	375	RefGen V2	χ2 p-value for B73 x Mo17: '8.06e-26' χ2 p-value for Mo17 x B73: '7.11e-19' Biased in favor of strain: 'B73'
GRMZM2G116360	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	0	0	5	100.00%	100.00%	11	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G116360	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	0	8	100.00%	100.00%	7	8	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G116327	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24 x 10^-5	191	101	155	87	65.41%	35.95%	292	242	RefGen V2	χ2 p-value for B73 x Mo17: '1.39e-07' χ2 p-value for Mo17 x B73: '.0000124' Biased in favor of strain: 'B73'
GRMZM2G116327	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.025876 x 10^-1	8	3	10	22	72.73%	68.75%	11	32	RefGen V2	χ2 p-value for B73 x Mo17: '.6698258' χ2 p-value for Mo17 x B73: '.8025876' Biased in favor of strain: ''
GRMZM2G116314	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.21 x 10^-5	72	9	51	12	88.89%	19.05%	81	63	RefGen V2	χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '1.08e-15' Biased in favor of strain: 'B73'
GRMZM2G116314	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.99 x 10^-24	213	49	215	43	81.30%	16.67%	262	258	RefGen V2	χ2 p-value for B73 x Mo17: '3.99e-24' χ2 p-value for Mo17 x B73: '9.31e-27' Biased in favor of strain: 'B73'
GRMZM2G116292	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	9877	4389	8216	4755	69.23%	36.66%	14266	12971	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116292	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.57 x 10^-12	8462	3689	4433	6677	69.64%	60.10%	12151	11110	RefGen V2	χ2 p-value for B73 x Mo17: '3.57e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116282	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	590	2	367	9	99.66%	2.39%	592	376	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116282	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1145	2	904	7	99.83%	0.77%	1147	911	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116273	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.72 x 10^-8	421	199	259	147	67.90%	36.21%	620	406	RefGen V2	χ2 p-value for B73 x Mo17: '4.85e-19' χ2 p-value for Mo17 x B73: '2.72e-08' Biased in favor of strain: 'B73'
GRMZM2G116273	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.79 x 10^-5	123	27	74	75	82.00%	50.34%	150	149	RefGen V2	χ2 p-value for B73 x Mo17: '.0000679' χ2 p-value for Mo17 x B73: '.0000235' Biased in favor of strain: 'B73'
GRMZM2G116271	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		25	0	4	0	100.00%	0.00%	25	4	RefGen V2	χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G116271	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116258	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.040383 x 10^-1	558	505	472	563	52.49%	54.40%	1063	1035	RefGen V2	χ2 p-value for B73 x Mo17: '.1040383' χ2 p-value for Mo17 x B73: '.0046752' Biased in favor of strain: ''
GRMZM2G116258	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1634	311	852	560	84.01%	39.66%	1945	1412	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116243	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.958133 x 10^-1	90	80	73	169	52.94%	69.83%	170	242	RefGen V2	χ2 p-value for B73 x Mo17: '.0001468' χ2 p-value for Mo17 x B73: '.2958133' Biased in favor of strain: ''
GRMZM2G116243	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.709994 x 10^-1	224	209	194	227	51.73%	53.92%	433	421	RefGen V2	χ2 p-value for B73 x Mo17: '.4709994' χ2 p-value for Mo17 x B73: '.1077648' Biased in favor of strain: ''
GRMZM2G116238	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.862137 x 10^-1	29	25	19	5	53.70%	20.83%	54	24	RefGen V2	χ2 p-value for B73 x Mo17: '.5862137' χ2 p-value for Mo17 x B73: '.0042667' Biased in favor of strain: ''
GRMZM2G116238	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116212	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G116212	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G116204	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.825279 x 10^-1	107	103	96	131	50.95%	57.71%	210	227	RefGen V2	χ2 p-value for B73 x Mo17: '.7825279' χ2 p-value for Mo17 x B73: '.0201775' Biased in favor of strain: ''
GRMZM2G116204	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.251993 x 10^-1	59	14	13	28	80.82%	68.29%	73	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0103013' χ2 p-value for Mo17 x B73: '.8251993' Biased in favor of strain: ''
GRMZM2G116190	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.07 x 10^-5	1063	424	718	1028	71.49%	58.88%	1487	1746	RefGen V2	χ2 p-value for B73 x Mo17: '.0000807' χ2 p-value for Mo17 x B73: '5.04e-12' Biased in favor of strain: 'B73'
GRMZM2G116190	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.41 x 10^-5	752	505	622	478	59.82%	43.45%	1257	1100	RefGen V2	χ2 p-value for B73 x Mo17: '3.24e-12' χ2 p-value for Mo17 x B73: '.0000141' Biased in favor of strain: 'B73'
GRMZM2G116140	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2198	1427	3081	2090	60.63%	40.42%	3625	5171	RefGen V2	χ2 p-value for B73 x Mo17: '1.53e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116140	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4419 x 10^-3	81	68	47	413	54.36%	89.78%	149	460	RefGen V2	χ2 p-value for B73 x Mo17: '.0014419' χ2 p-value for Mo17 x B73: '7.20e-26' Biased in favor of strain: 'Mo17'
GRMZM2G116135	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	11052	3819	6961	9056	74.32%	56.54%	14871	16017	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116135	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	9000	4490	7887	4159	66.72%	34.53%	13490	12046	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116133	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	4	5	50.00%	55.56%	2	9	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: ''
GRMZM2G116133	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	3	0.00%	100.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G116126	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.7804 x 10^-3	3328	1525	2093	2502	68.58%	54.45%	4853	4595	RefGen V2	χ2 p-value for B73 x Mo17: '.0047804' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G116126	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.17 x 10^-18	2100	1344	1682	1208	60.98%	41.80%	3444	2890	RefGen V2	χ2 p-value for B73 x Mo17: '5.67e-38' χ2 p-value for Mo17 x B73: '1.17e-18' Biased in favor of strain: 'B73'

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