Displaying data sets 18801 - 18900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G39865 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.71756'
Avg. embryo expression (LCM): '0'
AT5G39865 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39865 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39865 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39860 PRE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.57216'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39860 PRE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.93274'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39860 PRE1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '51.3129'
Avg. embryo expression (LCM): '60.9091'
AT5G39860 PRE1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39860 PRE1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39860 PRE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '535.367'
Avg. expression score in LCM sample: '218.117'
Tissue used: 'pure endosperm, no chalazal'
AT5G39850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '662.825'
Avg. expression score in LCM sample: '218.117'
Tissue used: 'full endosperm'
AT5G39850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '391.588'
Avg. embryo expression (LCM): '488.868'
AT5G39850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.49027 x 10-1 27 6 16 12 81.82% 42.86% 33 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.48072'
Avg. expression score for this sample: '34.1696'
Avg. expression score in LCM sample: '19.5629'
Tissue used: 'pure endosperm, no chalazal'
AT5G39840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.52928 x 10-1 40 18 40 57 68.97% 58.76% 58 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.48072'
Avg. expression score for this sample: '67.6517'
Avg. expression score in LCM sample: '19.5629'
Tissue used: 'full endosperm'
AT5G39840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1956 x 10-2 138 76 21 17 64.49% 44.74% 214 38 TAIR8 Avg. embryo expression (dissected): '166.282'
Avg. embryo expression (LCM): '231.869'
AT5G39840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.50074 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2151 x 10-2 54 14 79.41% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.14 x 10-4 109 27 80.15% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39830 DEG8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.10777 x 10-1 8 1 0 2 88.89% 100.00% 9 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.655576'
Avg. expression score for this sample: '20.0557'
Avg. expression score in LCM sample: '7.48124'
Tissue used: 'pure endosperm, no chalazal'
AT5G39830 DEG8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 5 7 14 66.67% 66.67% 15 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.655576'
Avg. expression score for this sample: '54.6401'
Avg. expression score in LCM sample: '7.48124'
Tissue used: 'full endosperm'
AT5G39830 DEG8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77713 x 10-1 4 8 1 1 33.33% 50.00% 12 2 TAIR8 Avg. embryo expression (dissected): '44.7223'
Avg. embryo expression (LCM): '55.961'
AT5G39830 DEG8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39830 DEG8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.16888 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39830 DEG8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.23903 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39820 NAC094 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 0 1 66.67% 100.00% 6 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102211'
Avg. expression score for this sample: '3.85079'
Avg. expression score in LCM sample: '5.86447'
Tissue used: 'pure endosperm, no chalazal'
AT5G39820 NAC094 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.5449 x 10-2 12 1 0 4 92.31% 100.00% 13 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102211'
Avg. expression score for this sample: '6.50194'
Avg. expression score in LCM sample: '5.86447'
Tissue used: 'full endosperm'
AT5G39820 NAC094 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31499 x 10-1 24 30 6 7 44.44% 53.85% 54 13 TAIR8 Avg. embryo expression (dissected): '57.3326'
Avg. embryo expression (LCM): '57.6564'
AT5G39820 NAC094 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39820 NAC094 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.52608 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39820 NAC094 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.616 x 10-3 43 36 54.43% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39810 AGL98 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.26367'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39810 AGL98 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.338318'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39810 AGL98 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G39810 AGL98 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39810 AGL98 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39810 AGL98 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 4 1 100.00% 20.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.045148'
Avg. expression score for this sample: '10.0043'
Avg. expression score in LCM sample: '17.3141'
Tissue used: 'pure endosperm, no chalazal'
AT5G39800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9898 x 10-2 41 3 11 29 93.18% 72.50% 44 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.045148'
Avg. expression score for this sample: '52.5913'
Avg. expression score in LCM sample: '17.3141'
Tissue used: 'full endosperm'
AT5G39800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 4 2 1 60.00% 33.33% 10 3 TAIR8 Avg. embryo expression (dissected): '16.5302'
Avg. embryo expression (LCM): '27.4907'
AT5G39800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5765 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9152 x 10-2 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.10721 x 10-1 37 4 90.24% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 84 17 33 20 83.17% 37.74% 101 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '38.3242'
Avg. expression score in LCM sample: '9.1568'
Tissue used: 'pure endosperm, no chalazal'
AT5G39790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.16072 x 10-1 76 19 50 56 80.00% 52.83% 95 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.5418'
Avg. expression score in LCM sample: '9.1568'
Tissue used: 'full endosperm'
AT5G39790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.4 x 10-5 168 57 33 16 74.67% 32.65% 225 49 TAIR8 Avg. embryo expression (dissected): '98.843'
Avg. embryo expression (LCM): '91.7027'
AT5G39790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.8897 x 10-2 7 10 41.18% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.54957 x 10-1 41 12 77.36% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-9 72 2 97.30% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39785 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.48985 x 10-1 34 6 10 9 85.00% 47.37% 40 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055836'
Avg. expression score for this sample: '34.7085'
Avg. expression score in LCM sample: '1.51389'
Tissue used: 'pure endosperm, no chalazal'
AT5G39785 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.9238 x 10-2 161 43 60 116 78.92% 65.91% 204 176 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055836'
Avg. expression score for this sample: '186.284'
Avg. expression score in LCM sample: '1.51389'
Tissue used: 'full endosperm'
AT5G39785 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 4 1 2 50.00% 66.67% 8 3 TAIR8 Avg. embryo expression (dissected): '9.12655'
Avg. embryo expression (LCM): '4.52109'
AT5G39785 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39785 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.07 x 10-4 68 6 91.89% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39785 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4 x 10-5 80 7 91.95% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.1677 x 10-1 0 1 0 11 0.00% 100.00% 1 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.97135'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.68813 x 10-1 1 10 0 14 9.09% 100.00% 11 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.95214'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.96004 x 10-1 2 12 0 3 14.29% 100.00% 14 3 TAIR8 Avg. embryo expression (dissected): '6.37131'
Avg. embryo expression (LCM): '4.08154'
AT5G39770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.7775 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.135 x 10-3 0 5 0.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39760 HB23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 2 100.00% 66.67% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.430428'
Avg. expression score for this sample: '155.657'
Avg. expression score in LCM sample: '7.27547'
Tissue used: 'pure endosperm, no chalazal'
AT5G39760 HB23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.69956 x 10-1 15 2 5 9 88.24% 64.29% 17 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.430428'
Avg. expression score for this sample: '142.894'
Avg. expression score in LCM sample: '7.27547'
Tissue used: 'full endosperm'
AT5G39760 HB23 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '30.6827'
Avg. embryo expression (LCM): '17.7578'
AT5G39760 HB23 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.1391 x 10-2 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39760 HB23 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39760 HB23 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.43243 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39750 AGL81 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39750 AGL81 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.27894'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39750 AGL81 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.544181'
Avg. embryo expression (LCM): '0'
AT5G39750 AGL81 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39750 AGL81 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39750 AGL81 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39740 RPL5B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 11 11 26 59.26% 70.27% 27 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.656817'
Avg. expression score for this sample: '1905.91'
Avg. expression score in LCM sample: '586.976'
Tissue used: 'pure endosperm, no chalazal'
AT5G39740 RPL5B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.80595 x 10-1 228 109 257 474 67.66% 64.84% 337 731 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.656817'
Avg. expression score for this sample: '2102.36'
Avg. expression score in LCM sample: '586.976'
Tissue used: 'full endosperm'
AT5G39740 RPL5B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.43579 x 10-1 46 52 17 4 46.94% 19.05% 98 21 TAIR8 Avg. embryo expression (dissected): '4991.3'
Avg. embryo expression (LCM): '4952.93'
AT5G39740 RPL5B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87948 x 10-1 41 24 63.08% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39740 RPL5B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.63 x 10-4 364 127 74.13% 491 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39740 RPL5B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-21 465 70 86.92% 535 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.53007 x 10-1 92 20 45 51 82.14% 53.12% 112 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.4e-08'
Avg. expression score for this sample: '426.143'
Avg. expression score in LCM sample: '119.95'
Tissue used: 'pure endosperm, no chalazal'
AT5G39730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6 x 10-10 213 33 53 224 86.59% 80.87% 246 277 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.4e-08'
Avg. expression score for this sample: '730.673'
Avg. expression score in LCM sample: '119.95'
Tissue used: 'full endosperm'
AT5G39730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.342 x 10-3 17 0 1 1 100.00% 50.00% 17 2 TAIR8 Avg. embryo expression (dissected): '51.792'
Avg. embryo expression (LCM): '19.8802'
AT5G39730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.9386 x 10-2 33 2 94.29% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.4 x 10-12 140 1 99.29% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-17 205 1 99.51% 206 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39720 AIG2L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4'
Avg. expression score for this sample: '3.17065'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G39720 AIG2L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4'
Avg. expression score for this sample: '1.01908'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G39720 AIG2L embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G39720 AIG2L endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39720 AIG2L endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39720 AIG2L endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39710 EMB2745 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.50626 x 10-1 14 8 10 6 63.64% 37.50% 22 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.648885'
Avg. expression score for this sample: '39.4863'
Avg. expression score in LCM sample: '20.3125'
Tissue used: 'pure endosperm, no chalazal'
AT5G39710 EMB2745 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.53283 x 10-1 49 16 20 55 75.38% 73.33% 65 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.648885'
Avg. expression score for this sample: '60.2898'
Avg. expression score in LCM sample: '20.3125'
Tissue used: 'full endosperm'
AT5G39710 EMB2745 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.67472 x 10-1 19 12 3 5 61.29% 62.50% 31 8 TAIR8 Avg. embryo expression (dissected): '72.7993'
Avg. embryo expression (LCM): '86.2272'
AT5G39710 EMB2745 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.91095 x 10-1 5 5 50.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39710 EMB2745 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.31284 x 10-1 198 66 75.00% 264 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G39710 EMB2745 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0 x 10-5 167 25 86.98% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'