GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G119745	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.61451 x 10^-1	106	65	63	55	61.99%	46.61%	171	118	RefGen V2	χ2 p-value for B73 x Mo17: '.0017165' χ2 p-value for Mo17 x B73: '.461451' Biased in favor of strain: ''
GRMZM2G119745	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.41196 x 10^-1	61	31	75	30	66.30%	28.57%	92	105	RefGen V2	χ2 p-value for B73 x Mo17: '.941196' χ2 p-value for Mo17 x B73: '1.22e-16' Biased in favor of strain: ''
GRMZM2G119740	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	9	0	100.00%	0.00%	5	9	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM2G119740	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	1	0	100.00%	0.00%	6	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G119736	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.555451 x 10^-1	842	738	690	718	53.29%	50.99%	1580	1408	RefGen V2	χ2 p-value for B73 x Mo17: '.0088861' χ2 p-value for Mo17 x B73: '.4555451' Biased in favor of strain: ''
GRMZM2G119736	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.89 x 10^-8	343	279	302	877	55.14%	74.39%	622	1179	RefGen V2	χ2 p-value for B73 x Mo17: '1.09e-09' χ2 p-value for Mo17 x B73: '1.89e-08' Biased in favor of strain: 'Mo17'
GRMZM2G119725	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.489035 x 10^-1	31	23	27	31	57.41%	53.45%	54	58	RefGen V2	χ2 p-value for B73 x Mo17: '.1489035' χ2 p-value for Mo17 x B73: '.0327204' Biased in favor of strain: ''
GRMZM2G119725	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.31951 x 10^-2	127	98	120	81	56.44%	40.30%	225	201	RefGen V2	χ2 p-value for B73 x Mo17: '.0531951' χ2 p-value for Mo17 x B73: '.0059441' Biased in favor of strain: ''
GRMZM2G119714	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.39063 x 10^-2	51	29	50	19	63.75%	27.54%	80	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0139063' χ2 p-value for Mo17 x B73: '.00019' Biased in favor of strain: 'B73'
GRMZM2G119714	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.879014 x 10^-1	70	39	56	60	64.22%	51.72%	109	116	RefGen V2	χ2 p-value for B73 x Mo17: '.5879014' χ2 p-value for Mo17 x B73: '.0006402' Biased in favor of strain: ''
GRMZM2G119703	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56211 x 10^-2	136	45	83	77	75.14%	48.12%	181	160	RefGen V2	χ2 p-value for B73 x Mo17: '.0156211' χ2 p-value for Mo17 x B73: '6.52e-07' Biased in favor of strain: ''
GRMZM2G119703	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.524 x 10^-4	157	72	109	63	68.56%	36.63%	229	172	RefGen V2	χ2 p-value for B73 x Mo17: '1.94e-08' χ2 p-value for Mo17 x B73: '.0004524' Biased in favor of strain: 'B73'
GRMZM2G119696	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.817 x 10^-4	207	117	215	146	63.89%	40.44%	324	361	RefGen V2	χ2 p-value for B73 x Mo17: '5.73e-07' χ2 p-value for Mo17 x B73: '.0002817' Biased in favor of strain: 'B73'
GRMZM2G119696	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29193 x 10^-2	320	123	201	267	72.23%	57.05%	443	468	RefGen V2	χ2 p-value for B73 x Mo17: '.0129193' χ2 p-value for Mo17 x B73: '.0000102' Biased in favor of strain: ''
GRMZM2G119691	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.64 x 10^-21	1614	500	803	886	76.35%	52.46%	2114	1689	RefGen V2	χ2 p-value for B73 x Mo17: '3.64e-21' χ2 p-value for Mo17 x B73: '3.03e-35' Biased in favor of strain: 'B73'
GRMZM2G119691	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.66 x 10^-17	502	111	359	166	81.89%	31.62%	613	525	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.66e-17' Biased in favor of strain: 'B73'
GRMZM2G119689	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.9 x 10^-5	485	116	797	964	80.70%	54.74%	601	1761	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.000069' Biased in favor of strain: ''
GRMZM2G119689	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.8 x 10^-8	330	85	1689	1713	79.52%	50.35%	415	3402	RefGen V2	χ2 p-value for B73 x Mo17: '2.80e-08' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119675	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	3.46 x 10^-11	2214	1407	1557	2516	61.14%	61.77%	3621	4073	RefGen V2	χ2 p-value for B73 x Mo17: '1.78e-12' χ2 p-value for Mo17 x B73: '3.46e-11' Biased in favor of strain: ''
GRMZM2G119675	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05 x 10^-17	1329	1809	1142	1819	42.35%	61.43%	3138	2961	RefGen V2	χ2 p-value for B73 x Mo17: '1.05e-17' χ2 p-value for Mo17 x B73: '1.56e-35' Biased in favor of strain: 'Mo17'
GRMZM2G119657	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	3	8	11	57.14%	57.89%	7	19	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: ''
GRMZM2G119657	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	1	7	50.00%	87.50%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.2112996' Biased in favor of strain: ''
GRMZM2G119642	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	2	1	0.00%	33.33%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G119642	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G119640	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1188	315	909	268	79.04%	22.77%	1503	1177	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119640	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1896	329	1107	817	85.21%	42.46%	2225	1924	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119627	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.86 x 10^-7	689	237	451	601	74.41%	57.13%	926	1052	RefGen V2	χ2 p-value for B73 x Mo17: '5.86e-07' χ2 p-value for Mo17 x B73: '5.31e-11' Biased in favor of strain: 'B73'
GRMZM2G119627	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.07 x 10^-6	501	351	466	340	58.80%	42.18%	852	806	RefGen V2	χ2 p-value for B73 x Mo17: '2.76e-07' χ2 p-value for Mo17 x B73: '9.07e-06' Biased in favor of strain: 'B73'
GRMZM2G119583	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.546 x 10^-4	2520	2206	2789	2543	53.32%	47.69%	4726	5332	RefGen V2	χ2 p-value for B73 x Mo17: '4.93e-06' χ2 p-value for Mo17 x B73: '.0007546' Biased in favor of strain: 'B73'
GRMZM2G119583	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.44 x 10^-7	2916	1226	1803	1760	70.40%	49.40%	4142	3563	RefGen V2	χ2 p-value for B73 x Mo17: '3.44e-07' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119571	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.524742 x 10^-1	36	15	30	28	70.59%	48.28%	51	58	RefGen V2	χ2 p-value for B73 x Mo17: '.5524742' χ2 p-value for Mo17 x B73: '.0029671' Biased in favor of strain: ''
GRMZM2G119571	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.380107 x 10^-1	39	20	22	33	66.10%	60.00%	59	55	RefGen V2	χ2 p-value for B73 x Mo17: '.0133763' χ2 p-value for Mo17 x B73: '.1380107' Biased in favor of strain: ''
GRMZM2G119566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.8574 x 10^-3	210	113	159	115	65.02%	41.97%	323	274	RefGen V2	χ2 p-value for B73 x Mo17: '6.77e-08' χ2 p-value for Mo17 x B73: '.0078574' Biased in favor of strain: 'B73'
GRMZM2G119566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6222 x 10^-3	59	58	25	97	50.43%	79.51%	117	122	RefGen V2	χ2 p-value for B73 x Mo17: '.0001943' χ2 p-value for Mo17 x B73: '.0026222' Biased in favor of strain: 'Mo17'
GRMZM2G119546	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.239 x 10^-3	66	15	37	41	81.48%	52.56%	81	78	RefGen V2	χ2 p-value for B73 x Mo17: '.0046782' χ2 p-value for Mo17 x B73: '.008239' Biased in favor of strain: 'B73'
GRMZM2G119546	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.962699 x 10^-1	72	60	78	37	54.55%	32.17%	132	115	RefGen V2	χ2 p-value for B73 x Mo17: '.2962699' χ2 p-value for Mo17 x B73: '.0001317' Biased in favor of strain: ''
GRMZM2G119544	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.42101 x 10^-2	146	107	151	86	57.71%	36.29%	253	237	RefGen V2	χ2 p-value for B73 x Mo17: '.0142101' χ2 p-value for Mo17 x B73: '.0000242' Biased in favor of strain: 'B73'
GRMZM2G119544	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.6643 x 10^-2	93	32	51	56	74.40%	52.34%	125	107	RefGen V2	χ2 p-value for B73 x Mo17: '.066643' χ2 p-value for Mo17 x B73: '.0016637' Biased in favor of strain: ''
GRMZM2G119527	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.23222 x 10^-2	203	141	40	121	59.01%	75.16%	344	161	RefGen V2	χ2 p-value for B73 x Mo17: '.0025958' χ2 p-value for Mo17 x B73: '.0223222' Biased in favor of strain: ''
GRMZM2G119527	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.393165 x 10^-1	26	13	10	16	66.67%	61.54%	39	26	RefGen V2	χ2 p-value for B73 x Mo17: '.037373' χ2 p-value for Mo17 x B73: '.2393165' Biased in favor of strain: ''
GRMZM2G119523	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.75 x 10^-27	108	485	116	348	18.21%	75.00%	593	464	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.75e-27' Biased in favor of strain: 'Mo17'
GRMZM2G119523	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.913638 x 10^-1	81	34	39	100	70.43%	71.94%	115	139	RefGen V2	χ2 p-value for B73 x Mo17: '.3913638' χ2 p-value for Mo17 x B73: '.1870114' Biased in favor of strain: ''
GRMZM2G119517	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.22 x 10^-26	4823	1806	2649	3471	72.76%	56.72%	6629	6120	RefGen V2	χ2 p-value for B73 x Mo17: '7.22e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119517	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.112 x 10^-4	265	102	123	185	72.21%	60.06%	367	308	RefGen V2	χ2 p-value for B73 x Mo17: '1.76e-17' χ2 p-value for Mo17 x B73: '.0004112' Biased in favor of strain: ''
GRMZM2G119513	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.273184 x 10^-1	205	198	160	123	50.87%	43.46%	403	283	RefGen V2	χ2 p-value for B73 x Mo17: '.7273184' χ2 p-value for Mo17 x B73: '.027848' Biased in favor of strain: ''
GRMZM2G119513	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.85132 x 10^-2	120	39	61	80	75.47%	56.74%	159	141	RefGen V2	χ2 p-value for B73 x Mo17: '.0185132' χ2 p-value for Mo17 x B73: '.0123821' Biased in favor of strain: ''
GRMZM2G119499	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G119499	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.73 x 10^-7	52	12	77	18	81.25%	18.95%	64	95	RefGen V2	χ2 p-value for B73 x Mo17: '5.73e-07' χ2 p-value for Mo17 x B73: '1.42e-09' Biased in favor of strain: 'B73'
GRMZM2G119496	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	0	100.00%	0.00%	3	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G119496	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G119494	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.46 x 10^-6	190	46	178	156	80.51%	46.71%	236	334	RefGen V2	χ2 p-value for B73 x Mo17: '6.46e-06' χ2 p-value for Mo17 x B73: '1.01e-14' Biased in favor of strain: 'B73'
GRMZM2G119494	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	642	107	821	113	85.71%	12.10%	749	934	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119490	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.9 x 10^-29	1636	871	1319	805	65.26%	37.90%	2507	2124	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.93e-29' Biased in favor of strain: 'B73'
GRMZM2G119490	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.0 x 10^-30	836	163	380	283	83.68%	42.68%	999	663	RefGen V2	χ2 p-value for B73 x Mo17: '3.75e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119485	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	524	63	315	196	89.27%	38.36%	587	511	RefGen V2	χ2 p-value for B73 x Mo17: '3.43e-31' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119485	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8 x 10^-29	448	159	427	155	73.81%	26.63%	607	582	RefGen V2	χ2 p-value for B73 x Mo17: '8.93e-32' χ2 p-value for Mo17 x B73: '1.75e-29' Biased in favor of strain: 'B73'
GRMZM2G119483	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	5	5	2	64.29%	28.57%	14	7	RefGen V2	χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G119483	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	3	3	75.00%	50.00%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: ''
GRMZM2G119482	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.62702 x 10^-2	111	41	79	37	73.03%	31.90%	152	116	RefGen V2	χ2 p-value for B73 x Mo17: '.0962702' χ2 p-value for Mo17 x B73: '1.96e-15' Biased in favor of strain: ''
GRMZM2G119482	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.73 x 10^-25	451	181	383	146	71.36%	27.60%	632	529	RefGen V2	χ2 p-value for B73 x Mo17: '6.60e-27' χ2 p-value for Mo17 x B73: '6.73e-25' Biased in favor of strain: 'B73'
GRMZM2G119471	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95551 x 10^-2	12	5	9	3	70.59%	25.00%	17	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0895551' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G119471	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		18	1	4	3	94.74%	42.86%	19	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0094445' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: ''
GRMZM2G119468	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G119468	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43059 x 10^-2	33	8	18	6	80.49%	25.00%	41	24	RefGen V2	χ2 p-value for B73 x Mo17: '.0000945' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: 'B73'
GRMZM2G119426	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.58537 x 10^-2	151	98	148	118	60.64%	44.36%	249	266	RefGen V2	χ2 p-value for B73 x Mo17: '.000783' χ2 p-value for Mo17 x B73: '.0658537' Biased in favor of strain: ''
GRMZM2G119426	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.799225 x 10^-1	45	5	17	30	90.00%	63.83%	50	47	RefGen V2	χ2 p-value for B73 x Mo17: '.0004653' χ2 p-value for Mo17 x B73: '.6799225' Biased in favor of strain: ''
GRMZM2G119397	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.057 x 10^-4	190	54	154	161	77.87%	51.11%	244	315	RefGen V2	χ2 p-value for B73 x Mo17: '.0002057' χ2 p-value for Mo17 x B73: '4.72e-09' Biased in favor of strain: 'B73'
GRMZM2G119397	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.868752 x 10^-1	87	65	68	81	57.24%	54.36%	152	149	RefGen V2	χ2 p-value for B73 x Mo17: '.0743529' χ2 p-value for Mo17 x B73: '.2868752' Biased in favor of strain: ''
GRMZM2G119383	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.48 x 10^-5	192	119	199	106	61.74%	34.75%	311	305	RefGen V2	χ2 p-value for B73 x Mo17: '.0000348' χ2 p-value for Mo17 x B73: '1.01e-07' Biased in favor of strain: 'B73'
GRMZM2G119383	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.08 x 10^-11	226	34	114	92	86.92%	44.66%	260	206	RefGen V2	χ2 p-value for B73 x Mo17: '4.25e-12' χ2 p-value for Mo17 x B73: '2.08e-11' Biased in favor of strain: 'B73'
GRMZM2G119361	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.09 x 10^-18	13459	5862	6675	11400	69.66%	63.07%	19321	18075	RefGen V2	χ2 p-value for B73 x Mo17: '1.09e-18' χ2 p-value for Mo17 x B73: '1.11e-24' Biased in favor of strain: 'B73'
GRMZM2G119361	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.28 x 10^-7	6011	3907	4341	3889	60.61%	47.25%	9918	8230	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.28e-07' Biased in favor of strain: 'B73'
GRMZM2G119357	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.376141 x 10^-1	316	287	281	313	52.40%	52.69%	603	594	RefGen V2	χ2 p-value for B73 x Mo17: '.2376141' χ2 p-value for Mo17 x B73: '.1891911' Biased in favor of strain: ''
GRMZM2G119357	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.671523 x 10^-1	248	143	170	312	63.43%	64.73%	391	482	RefGen V2	χ2 p-value for B73 x Mo17: '.1741544' χ2 p-value for Mo17 x B73: '.3671523' Biased in favor of strain: ''
GRMZM2G119339	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.688776 x 10^-1	111	54	68	88	67.27%	56.41%	165	156	RefGen V2	χ2 p-value for B73 x Mo17: '.8688776' χ2 p-value for Mo17 x B73: '.0065784' Biased in favor of strain: ''
GRMZM2G119339	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.26119 x 10^-2	64	42	62	38	60.38%	38.00%	106	100	RefGen V2	χ2 p-value for B73 x Mo17: '.0326119' χ2 p-value for Mo17 x B73: '.0163951' Biased in favor of strain: 'B73'
GRMZM2G119322	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.72442 x 10^-2	81	1	33	49	98.78%	59.76%	82	82	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-18' χ2 p-value for Mo17 x B73: '.0772442' Biased in favor of strain: ''
GRMZM2G119322	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	8.29 x 10^-7	1157	96	874	2130	92.34%	70.91%	1253	3004	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '8.29e-07' Biased in favor of strain: ''
GRMZM2G119316	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	1	1	3	92.31%	75.00%	13	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0498614' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM2G119316	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.239399 x 10^-1	107	75	80	68	58.79%	45.95%	182	148	RefGen V2	χ2 p-value for B73 x Mo17: '.0176922' χ2 p-value for Mo17 x B73: '.3239399' Biased in favor of strain: ''
GRMZM2G119300	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.44 x 10^-5	591	451	472	318	56.72%	40.25%	1042	790	RefGen V2	χ2 p-value for B73 x Mo17: '.0000144' χ2 p-value for Mo17 x B73: '4.28e-08' Biased in favor of strain: 'B73'
GRMZM2G119300	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.2129 x 10^-3	921	389	499	601	70.31%	54.64%	1310	1100	RefGen V2	χ2 p-value for B73 x Mo17: '.0052129' χ2 p-value for Mo17 x B73: '2.58e-17' Biased in favor of strain: 'B73'
GRMZM2G119273	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2678 x 10^-3	144	41	56	61	77.84%	52.14%	185	117	RefGen V2	χ2 p-value for B73 x Mo17: '.0012678' χ2 p-value for Mo17 x B73: '.0008561' Biased in favor of strain: 'B73'
GRMZM2G119273	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.02 x 10^-10	150	57	150	56	72.46%	27.18%	207	206	RefGen V2	χ2 p-value for B73 x Mo17: '1.02e-10' χ2 p-value for Mo17 x B73: '5.78e-11' Biased in favor of strain: 'B73'
GRMZM2G119265	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.24861 x 10^-2	161	38	72	52	80.90%	41.94%	199	124	RefGen V2	χ2 p-value for B73 x Mo17: '2.80e-18' χ2 p-value for Mo17 x B73: '.0724861' Biased in favor of strain: ''
GRMZM2G119265	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1 x 10^-28	740	111	370	330	86.96%	47.14%	851	700	RefGen V2	χ2 p-value for B73 x Mo17: '3.69e-36' χ2 p-value for Mo17 x B73: '6.10e-28' Biased in favor of strain: 'B73'
GRMZM2G119261	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	0	3	0	100.00%	0.00%	11	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G119261	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	1	0	100.00%	0.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G119258	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.5 x 10^-5	58	22	39	11	72.50%	22.00%	80	50	RefGen V2	χ2 p-value for B73 x Mo17: '.000057' χ2 p-value for Mo17 x B73: '.000075' Biased in favor of strain: 'B73'
GRMZM2G119258	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.5459 x 10^-3	24	2	19	8	92.31%	29.63%	26	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0055459' χ2 p-value for Mo17 x B73: '.0000446' Biased in favor of strain: 'B73'
GRMZM2G119256	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2288	591	1233	1257	79.47%	50.48%	2879	2490	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G119256	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.53 x 10^-27	1136	433	834	450	72.40%	35.05%	1569	1284	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '8.53e-27' Biased in favor of strain: 'B73'
GRMZM2G119249	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.473896 x 10^-1	14	9	13	14	60.87%	51.85%	23	27	RefGen V2	χ2 p-value for B73 x Mo17: '.2971465' χ2 p-value for Mo17 x B73: '.8473896' Biased in favor of strain: ''
GRMZM2G119249	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.054693 x 10^-1	10	4	6	9	71.43%	60.00%	14	15	RefGen V2	χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '.5838823' Biased in favor of strain: ''
GRMZM2G119248	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.34072 x 10^-1	25	14	16	13	64.10%	44.83%	39	29	RefGen V2	χ2 p-value for B73 x Mo17: '.734072' χ2 p-value for Mo17 x B73: '.012602' Biased in favor of strain: ''
GRMZM2G119248	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.025873 x 10^-1	46	29	31	33	61.33%	51.56%	75	64	RefGen V2	χ2 p-value for B73 x Mo17: '.0496472' χ2 p-value for Mo17 x B73: '.8025873' Biased in favor of strain: ''
GRMZM2G119219	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.13 x 10^-8	172	59	128	54	74.46%	29.67%	231	182	RefGen V2	χ2 p-value for B73 x Mo17: '1.05e-13' χ2 p-value for Mo17 x B73: '4.13e-08' Biased in favor of strain: 'B73'
GRMZM2G119219	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.99 x 10^-12	251	31	77	45	89.01%	36.89%	282	122	RefGen V2	χ2 p-value for B73 x Mo17: '1.74e-15' χ2 p-value for Mo17 x B73: '2.99e-12' Biased in favor of strain: 'B73'
GRMZM2G119186	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.267995 x 10^-1	29	7	6	7	80.56%	53.85%	36	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0771036' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: ''
GRMZM2G119186	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.185458 x 10^-1	15	8	9	10	65.22%	52.63%	23	19	RefGen V2	χ2 p-value for B73 x Mo17: '.1443998' χ2 p-value for Mo17 x B73: '.8185458' Biased in favor of strain: ''

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