Displaying data sets 18401 - 18500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G40460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.91733 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.638 x 10-3 36 3 92.31% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40451 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.10526 x 10-1 5 0 0 5 100.00% 100.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.6e-31'
Avg. expression score for this sample: '9.80544'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'pure endosperm, no chalazal'
AT5G40451 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.0 x 10-30 49 1 1 233 98.00% 99.57% 50 234 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.6e-31'
Avg. expression score for this sample: '175.462'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'full endosperm'
AT5G40451 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.34103'
Avg. embryo expression (LCM): '0'
AT5G40451 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40451 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-15 68 26 72.34% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40451 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-23 95 47 66.90% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.0 x 10-16 87 1 0 60 98.86% 100.00% 88 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.4077'
Avg. expression score in LCM sample: '.191073'
Tissue used: 'pure endosperm, no chalazal'
AT5G40450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 536 7 11 1617 98.71% 99.32% 543 1628 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '307.299'
Avg. expression score in LCM sample: '.191073'
Tissue used: 'full endosperm'
AT5G40450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.66667 x 10-1 4 0 0 1 100.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '2.56996'
Avg. embryo expression (LCM): '.163262'
AT5G40450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 64 0 100.00% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 689 481 58.89% 1170 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1660 339 83.04% 1999 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40440 MKK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 5 2 4 73.68% 66.67% 19 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487747'
Avg. expression score for this sample: '13.6199'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40440 MKK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.84078 x 10-1 6 3 1 11 66.67% 91.67% 9 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487747'
Avg. expression score for this sample: '32.1991'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40440 MKK3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 11 7 2 1 61.11% 33.33% 18 3 TAIR8 Avg. embryo expression (dissected): '20.8079'
Avg. embryo expression (LCM): '22.5552'
AT5G40440 MKK3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.21501 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40440 MKK3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40440 MKK3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.6128 x 10-2 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40430 MYB22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.10526 x 10-1 3 0 0 7 100.00% 100.00% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019656'
Avg. expression score for this sample: '18.8513'
Avg. expression score in LCM sample: '30.6158'
Tissue used: 'pure endosperm, no chalazal'
AT5G40430 MYB22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02941 x 10-1 1 0 0 8 100.00% 100.00% 1 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019656'
Avg. expression score for this sample: '9.62898'
Avg. expression score in LCM sample: '30.6158'
Tissue used: 'full endosperm'
AT5G40430 MYB22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.93863'
Avg. embryo expression (LCM): '0'
AT5G40430 MYB22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40430 MYB22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 61 0 100.00% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40430 MYB22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40420 OLEO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.46568 x 10-1 455 258 244 613 63.81% 71.53% 713 857 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.042732'
Avg. expression score for this sample: '6077.86'
Avg. expression score in LCM sample: '233.138'
Tissue used: 'pure endosperm, no chalazal'
AT5G40420 OLEO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.678 x 10-3 1387 925 588 1267 59.99% 68.30% 2312 1855 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.042732'
Avg. expression score for this sample: '12181.1'
Avg. expression score in LCM sample: '233.138'
Tissue used: 'full endosperm'
AT5G40420 OLEO2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.62058 x 10-1 782 936 242 301 45.52% 55.43% 1718 543 TAIR8 Avg. embryo expression (dissected): '11518.3'
Avg. embryo expression (LCM): '1306.38'
AT5G40420 OLEO2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.0831 x 10-2 538 250 68.27% 788 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40420 OLEO2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.24 x 10-4 37 47 44.05% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40420 OLEO2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.00288 x 10-1 76 50 60.32% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085449'
Avg. expression score for this sample: '3.47677'
Avg. expression score in LCM sample: '3.96844'
Tissue used: 'pure endosperm, no chalazal'
AT5G40410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.21739 x 10-1 8 1 0 4 88.89% 100.00% 9 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085449'
Avg. expression score for this sample: '22.0009'
Avg. expression score in LCM sample: '3.96844'
Tissue used: 'full endosperm'
AT5G40410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 6 2 0 62.50% 0.00% 16 2 TAIR8 Avg. embryo expression (dissected): '17.1796'
Avg. embryo expression (LCM): '12.2069'
AT5G40410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5528 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '29.9999'
Avg. expression score in LCM sample: '11.9935'
Tissue used: 'pure endosperm, no chalazal'
AT5G40405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.974'
Avg. expression score in LCM sample: '11.9935'
Tissue used: 'full endosperm'
AT5G40405 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '64.9082'
Avg. embryo expression (LCM): '57.3927'
AT5G40405 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40405 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40405 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.49897 x 10-1 7 4 7 5 63.64% 41.67% 11 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.748154'
Avg. expression score for this sample: '30.868'
Avg. expression score in LCM sample: '42.1977'
Tissue used: 'pure endosperm, no chalazal'
AT5G40400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.57285 x 10-1 22 4 12 28 84.62% 70.00% 26 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.748154'
Avg. expression score for this sample: '71.3933'
Avg. expression score in LCM sample: '42.1977'
Tissue used: 'full endosperm'
AT5G40400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.93064 x 10-1 5 14 2 4 26.32% 66.67% 19 6 TAIR8 Avg. embryo expression (dissected): '61.137'
Avg. embryo expression (LCM): '56.9657'
AT5G40400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.11111 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2618 x 10-2 30 5 85.71% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.142 x 10-3 48 6 88.89% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40395 U6acat endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40395 U6acat endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.874049'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40395 U6acat embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '6.06579'
AT5G40395 U6acat endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40395 U6acat endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40395 U6acat endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40390 SIP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.203373'
Avg. expression score for this sample: '4.58192'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40390 SIP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.3783 x 10-2 5 5 5 1 50.00% 16.67% 10 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.203373'
Avg. expression score for this sample: '18.7936'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40390 SIP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.92169'
Avg. embryo expression (LCM): '3.11453'
AT5G40390 SIP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.3871 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40390 SIP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40390 SIP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40384 MIR866A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40384 MIR866A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40384 MIR866A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G40384 MIR866A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40384 MIR866A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40384 MIR866A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40382 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.812726'
Avg. expression score for this sample: '3.2872'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40382 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.06561 x 10-1 14 6 5 14 70.00% 73.68% 20 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.812726'
Avg. expression score for this sample: '28.2573'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40382 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.57386'
Avg. embryo expression (LCM): '0'
AT5G40382 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.50589 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40382 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40382 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40380 CRK42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.713982'
Avg. expression score for this sample: '.623443'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40380 CRK42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.13982 x 10-1 6 3 1 9 66.67% 90.00% 9 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.713982'
Avg. expression score for this sample: '5.47317'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40380 CRK42 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.140728'
Avg. embryo expression (LCM): '0'
AT5G40380 CRK42 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40380 CRK42 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40380 CRK42 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40370 GRXC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.27411 x 10-1 46 76 22 107 37.70% 82.95% 122 129 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.430055'
Avg. expression score for this sample: '157.558'
Avg. expression score in LCM sample: '45.5488'
Tissue used: 'pure endosperm, no chalazal'
AT5G40370 GRXC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.077 x 10-3 30 27 12 126 52.63% 91.30% 57 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.430055'
Avg. expression score for this sample: '141.378'
Avg. expression score in LCM sample: '45.5488'
Tissue used: 'full endosperm'
AT5G40370 GRXC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.55 x 10-4 6 53 4 7 10.17% 63.64% 59 11 TAIR8 Avg. embryo expression (dissected): '51.5328'
Avg. embryo expression (LCM): '30.0652'
AT5G40370 GRXC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.07 x 10-4 37 2 94.87% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40370 GRXC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9 x 10-5 132 21 86.27% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40370 GRXC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.35665 x 10-1 55 18 75.34% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40360 MYB115 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.0 x 10-12 89 32 6 208 73.55% 97.20% 121 214 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-21'
Avg. expression score for this sample: '163.213'
Avg. expression score in LCM sample: '157.033'
Tissue used: 'pure endosperm, no chalazal'
AT5G40360 MYB115 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-11 10 68 21 458 12.82% 95.62% 78 479 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-21'
Avg. expression score for this sample: '206.728'
Avg. expression score in LCM sample: '157.033'
Tissue used: 'full endosperm'
AT5G40360 MYB115 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.40867 x 10-1 4 1 0 5 80.00% 100.00% 5 5 TAIR8 Avg. embryo expression (dissected): '15.0937'
Avg. embryo expression (LCM): '0'
AT5G40360 MYB115 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.50935 x 10-1 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40360 MYB115 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 38 6 86.36% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40360 MYB115 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.22344 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40350 MYB24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40350 MYB24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40350 MYB24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G40350 MYB24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40350 MYB24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40350 MYB24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40348 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40348 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'