Displaying data sets 18201 - 18300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G40760 G6PD6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '303.41'
Avg. embryo expression (LCM): '157.711'
AT5G40760 G6PD6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40760 G6PD6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40760 G6PD6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.4 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G40750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40740 AUG6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '49.516'
Avg. expression score in LCM sample: '48.0328'
Tissue used: 'pure endosperm, no chalazal'
AT5G40740 AUG6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '71.9059'
Avg. expression score in LCM sample: '48.0328'
Tissue used: 'full endosperm'
AT5G40740 AUG6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '71.5253'
Avg. embryo expression (LCM): '54.2405'
AT5G40740 AUG6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40740 AUG6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40740 AUG6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40730 AGP24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.42005 x 10-1 129 58 85 152 68.98% 64.14% 187 237 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.833557'
Avg. expression score for this sample: '466.872'
Avg. expression score in LCM sample: '677.089'
Tissue used: 'pure endosperm, no chalazal'
AT5G40730 AGP24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.99553 x 10-1 5 6 7 13 45.45% 65.00% 11 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.833557'
Avg. expression score for this sample: '26.407'
Avg. expression score in LCM sample: '677.089'
Tissue used: 'full endosperm'
AT5G40730 AGP24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.57057 x 10-1 6 3 1 7 66.67% 87.50% 9 8 TAIR8 Avg. embryo expression (dissected): '32.186'
Avg. embryo expression (LCM): '5.6388'
AT5G40730 AGP24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.71921 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40730 AGP24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.15127 x 10-1 1862 959 66.00% 2821 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40730 AGP24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.99269 x 10-1 445 220 66.92% 665 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.1066 x 10-1 21 6 8 23 77.78% 74.19% 27 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.149018'
Avg. expression score for this sample: '27.4898'
Avg. expression score in LCM sample: '18.8868'
Tissue used: 'pure endosperm, no chalazal'
AT5G40720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.07283 x 10-1 12 3 5 19 80.00% 79.17% 15 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.149018'
Avg. expression score for this sample: '11.253'
Avg. expression score in LCM sample: '18.8868'
Tissue used: 'full endosperm'
AT5G40720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 0 3 2 100.00% 40.00% 3 5 TAIR8 Avg. embryo expression (dissected): '6.58692'
Avg. embryo expression (LCM): '.61537'
AT5G40720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.01993 x 10-1 19 12 61.29% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 5 2 100.00% 28.57% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '34.8889'
Avg. expression score in LCM sample: '48.5325'
Tissue used: 'pure endosperm, no chalazal'
AT5G40710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.13982 x 10-1 4 0 4 11 100.00% 73.33% 4 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '63.9295'
Avg. expression score in LCM sample: '48.5325'
Tissue used: 'full endosperm'
AT5G40710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.6923 x 10-2 1 0 0 6 100.00% 100.00% 1 6 TAIR8 Avg. embryo expression (dissected): '24.4185'
Avg. embryo expression (LCM): '13.0358'
AT5G40710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.07423 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.14137 x 10-1 103 23 81.75% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 58 22 72.50% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.36546 x 10-1 69 185 36 321 27.17% 89.92% 254 357 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009208'
Avg. expression score for this sample: '276.694'
Avg. expression score in LCM sample: '172.98'
Tissue used: 'pure endosperm, no chalazal'
AT5G40700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9 x 10-5 94 196 73 709 32.41% 90.66% 290 782 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009208'
Avg. expression score for this sample: '322.914'
Avg. expression score in LCM sample: '172.98'
Tissue used: 'full endosperm'
AT5G40700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4882 x 10-2 11 60 2 17 15.49% 89.47% 71 19 TAIR8 Avg. embryo expression (dissected): '77.447'
Avg. embryo expression (LCM): '89.2789'
AT5G40700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.226 x 10-3 39 4 90.70% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-12 82 0 100.00% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0849 x 10-2 123 33 78.85% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 19 1 12 6 95.00% 33.33% 20 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002999'
Avg. expression score for this sample: '98.9596'
Avg. expression score in LCM sample: '13.478'
Tissue used: 'pure endosperm, no chalazal'
AT5G40690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.86 x 10-4 59 5 14 52 92.19% 78.79% 64 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002999'
Avg. expression score for this sample: '386.638'
Avg. expression score in LCM sample: '13.478'
Tissue used: 'full endosperm'
AT5G40690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '5.70267'
Avg. embryo expression (LCM): '0'
AT5G40690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.04943 x 10-1 18 1 94.74% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.99 x 10-4 39 0 100.00% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6 x 10-7 110 1 99.10% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.145091'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G40680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 136 98 58.12% 234 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 38 13 74.51% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.39753 x 10-1 143 72 62 92 66.51% 59.74% 215 154 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.154432'
Avg. expression score for this sample: '180.538'
Avg. expression score in LCM sample: '140.703'
Tissue used: 'pure endosperm, no chalazal'
AT5G40670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3422 x 10-2 198 63 113 280 75.86% 71.25% 261 393 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.154432'
Avg. expression score for this sample: '150.829'
Avg. expression score in LCM sample: '140.703'
Tissue used: 'full endosperm'
AT5G40670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.71159 x 10-1 24 31 8 12 43.64% 60.00% 55 20 TAIR8 Avg. embryo expression (dissected): '51.9684'
Avg. embryo expression (LCM): '26.8251'
AT5G40670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.29755 x 10-1 27 13 67.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7 x 10-27 223 3 98.67% 226 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 487 15 97.01% 502 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.25023 x 10-1 26 16 6 27 61.90% 81.82% 42 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.031293'
Avg. expression score for this sample: '120.203'
Avg. expression score in LCM sample: '80.3094'
Tissue used: 'pure endosperm, no chalazal'
AT5G40660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3828 x 10-2 38 6 11 45 86.36% 80.36% 44 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.031293'
Avg. expression score for this sample: '112.371'
Avg. expression score in LCM sample: '80.3094'
Tissue used: 'full endosperm'
AT5G40660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.71186 x 10-1 49 36 7 15 57.65% 68.18% 85 22 TAIR8 Avg. embryo expression (dissected): '189.813'
Avg. embryo expression (LCM): '242.154'
AT5G40660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.72104 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.10321 x 10-1 114 20 85.07% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.9723 x 10-2 78 12 86.67% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40650 SDH2-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64472'
Avg. expression score for this sample: '154.243'
Avg. expression score in LCM sample: '150.874'
Tissue used: 'pure endosperm, no chalazal'
AT5G40650 SDH2-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.10777 x 10-1 5 0 1 5 100.00% 83.33% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64472'
Avg. expression score for this sample: '185.531'
Avg. expression score in LCM sample: '150.874'
Tissue used: 'full endosperm'
AT5G40650 SDH2-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 0 33.33% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '253.038'
Avg. embryo expression (LCM): '197.823'
AT5G40650 SDH2-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40650 SDH2-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.72469 x 10-1 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40650 SDH2-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.54589 x 10-1 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40645 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.759'
Avg. expression score in LCM sample: '10.1416'
Tissue used: 'pure endosperm, no chalazal'
AT5G40645 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.50574'
Avg. expression score in LCM sample: '10.1416'
Tissue used: 'full endosperm'
AT5G40645 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.0901'
Avg. embryo expression (LCM): '0'
AT5G40645 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40645 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40645 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.54156'
Avg. expression score for this sample: '121.682'
Avg. expression score in LCM sample: '219.807'
Tissue used: 'pure endosperm, no chalazal'
AT5G40640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.78988 x 10-1 22 0 20 8 100.00% 28.57% 22 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.54156'
Avg. expression score for this sample: '115.161'
Avg. expression score in LCM sample: '219.807'
Tissue used: 'full endosperm'
AT5G40640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '38.9648'
Avg. embryo expression (LCM): '54.8684'
AT5G40640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.15094 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.46354 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.641837'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.871227'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.34842 x 10-1 7 1 1 0 87.50% 0.00% 8 1 TAIR8 Avg. embryo expression (dissected): '16.966'
Avg. embryo expression (LCM): '59.7286'
AT5G40630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G40620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40610 GPDHp endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.4 x 10-8 663 45 541 91 93.64% 14.40% 708 632 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-26'
Avg. expression score for this sample: '929.973'
Avg. expression score in LCM sample: '472.611'
Tissue used: 'pure endosperm, no chalazal'
AT5G40610 GPDHp endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-19 992 51 922 96 95.11% 9.43% 1043 1018 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-26'
Avg. expression score for this sample: '1152.53'
Avg. expression score in LCM sample: '472.611'
Tissue used: 'full endosperm'
AT5G40610 GPDHp embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.3 x 10-29 873 113 240 31 88.54% 11.44% 986 271 TAIR8 Avg. embryo expression (dissected): '1257.67'
Avg. embryo expression (LCM): '760.723'
AT5G40610 GPDHp endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2 x 10-25 13 117 10.00% 130 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40610 GPDHp endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.4 x 10-17 17 95 15.18% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40610 GPDHp endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 197 16 92.49% 213 TAIR8 Mutant effect: 'N/A (not a MEG)'