GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G121868	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1294	290	1244	291	81.69%	18.96%	1584	1535	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121868	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1628 x 10^-3	158	51	184	134	75.60%	42.14%	209	318	RefGen V2	χ2 p-value for B73 x Mo17: '.0061628' χ2 p-value for Mo17 x B73: '1.72e-20' Biased in favor of strain: 'B73'
GRMZM2G121851	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5 x 10^-6	417	129	218	275	76.37%	55.78%	546	493	RefGen V2	χ2 p-value for B73 x Mo17: '1.50e-06' χ2 p-value for Mo17 x B73: '2.94e-07' Biased in favor of strain: 'B73'
GRMZM2G121851	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.26 x 10^-10	419	206	276	149	67.04%	35.06%	625	425	RefGen V2	χ2 p-value for B73 x Mo17: '1.60e-17' χ2 p-value for Mo17 x B73: '7.26e-10' Biased in favor of strain: 'B73'
GRMZM2G121843	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5387 x 10^-3	187	133	192	117	58.44%	37.86%	320	309	RefGen V2	χ2 p-value for B73 x Mo17: '.0025387' χ2 p-value for Mo17 x B73: '.0000198' Biased in favor of strain: 'B73'
GRMZM2G121843	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.916 x 10^-4	97	22	56	59	81.51%	51.30%	119	115	RefGen V2	χ2 p-value for B73 x Mo17: '.0005916' χ2 p-value for Mo17 x B73: '.0004746' Biased in favor of strain: 'B73'
GRMZM2G121840	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.984323 x 10^-1	32	19	22	47	62.75%	68.12%	51	69	RefGen V2	χ2 p-value for B73 x Mo17: '.552429' χ2 p-value for Mo17 x B73: '.7984323' Biased in favor of strain: ''
GRMZM2G121840	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.4853 x 10^-3	48	20	28	11	70.59%	28.21%	68	39	RefGen V2	χ2 p-value for B73 x Mo17: '.000685' χ2 p-value for Mo17 x B73: '.0064853' Biased in favor of strain: 'B73'
GRMZM2G121826	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.86 x 10^-5	383	218	353	254	63.73%	41.85%	601	607	RefGen V2	χ2 p-value for B73 x Mo17: '1.69e-11' χ2 p-value for Mo17 x B73: '.0000586' Biased in favor of strain: 'B73'
GRMZM2G121826	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.443866 x 10^-1	288	153	294	450	65.31%	60.48%	441	744	RefGen V2	χ2 p-value for B73 x Mo17: '.5443866' χ2 p-value for Mo17 x B73: '.0003469' Biased in favor of strain: ''
GRMZM2G121790	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.360369 x 10^-1	496	252	359	397	66.31%	52.51%	748	756	RefGen V2	χ2 p-value for B73 x Mo17: '.8360369' χ2 p-value for Mo17 x B73: '1.52e-16' Biased in favor of strain: ''
GRMZM2G121790	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.703741 x 10^-1	441	371	363	362	54.31%	49.93%	812	725	RefGen V2	χ2 p-value for B73 x Mo17: '.0140291' χ2 p-value for Mo17 x B73: '.9703741' Biased in favor of strain: ''
GRMZM2G121776	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	4	2	2	60.00%	50.00%	10	4	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G121776	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	6	11	80.00%	64.71%	5	17	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.8638316' Biased in favor of strain: ''
GRMZM2G121724	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G121724	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	4	100.00%	100.00%	1	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G121715	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.694171 x 10^-1	24	17	19	18	58.54%	48.65%	41	37	RefGen V2	χ2 p-value for B73 x Mo17: '.2742988' χ2 p-value for Mo17 x B73: '.8694171' Biased in favor of strain: ''
GRMZM2G121715	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.340949 x 10^-1	22	9	14	25	70.97%	64.10%	31	39	RefGen V2	χ2 p-value for B73 x Mo17: '.6114703' χ2 p-value for Mo17 x B73: '.7340949' Biased in favor of strain: ''
GRMZM2G121700	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.48 x 10^-8	239	47	104	95	83.57%	47.74%	286	199	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-09' χ2 p-value for Mo17 x B73: '1.48e-08' Biased in favor of strain: 'B73'
GRMZM2G121700	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.37 x 10^-10	387	113	239	120	77.40%	33.43%	500	359	RefGen V2	χ2 p-value for B73 x Mo17: '1.61e-34' χ2 p-value for Mo17 x B73: '3.37e-10' Biased in favor of strain: 'B73'
GRMZM2G121683	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.54 x 10^-12	2774	2282	3419	1800	54.87%	34.49%	5056	5219	RefGen V2	χ2 p-value for B73 x Mo17: '4.54e-12' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121683	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	PEG	0.0	553	5688	8724	216	8.86%	2.42%	6241	8940	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G121663	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	3	2	3	40.00%	60.00%	5	5	RefGen V2	χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: ''
GRMZM2G121663	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	4	7	5	5	36.36%	50.00%	11	10	RefGen V2	χ2 p-value for B73 x Mo17: '.3657123' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G121649	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5387 x 10^-3	214	151	203	144	58.63%	41.50%	365	347	RefGen V2	χ2 p-value for B73 x Mo17: '.0009753' χ2 p-value for Mo17 x B73: '.0015387' Biased in favor of strain: 'B73'
GRMZM2G121649	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.079151 x 10^-1	52	21	51	43	71.23%	45.74%	73	94	RefGen V2	χ2 p-value for B73 x Mo17: '.4079151' χ2 p-value for Mo17 x B73: '.0000168' Biased in favor of strain: ''
GRMZM2G121625	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.99 x 10^-25	683	134	337	188	83.60%	35.81%	817	525	RefGen V2	χ2 p-value for B73 x Mo17: '9.99e-25' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121625	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	562	167	561	146	77.09%	20.65%	729	707	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121621	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	2	7	2	85.71%	22.22%	14	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0075263' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: ''
GRMZM2G121621	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1902 x 10^-3	73	15	64	54	82.95%	45.76%	88	118	RefGen V2	χ2 p-value for B73 x Mo17: '.0011902' χ2 p-value for Mo17 x B73: '1.46e-06' Biased in favor of strain: 'B73'
GRMZM2G121612	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.35 x 10^-23	297	23	247	117	92.81%	32.14%	320	364	RefGen V2	χ2 p-value for B73 x Mo17: '3.35e-23' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121612	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1343	613	958	483	68.66%	33.52%	1956	1441	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.34e-36' Biased in favor of strain: 'B73'
GRMZM2G121579	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	5	0	3	0.00%	100.00%	5	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G121579	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	11	0.00%	100.00%	3	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: ''
GRMZM2G121570	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	0.0	496	552	842	407	47.33%	32.59%	1048	1249	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G121570	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7052 x 10^-3	102	152	187	117	40.16%	38.49%	254	304	RefGen V2	χ2 p-value for B73 x Mo17: '.0017052' χ2 p-value for Mo17 x B73: '.0000595' Biased in favor of strain: ''
GRMZM2G121565	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.23992 x 10^-2	96	48	74	53	66.67%	41.73%	144	127	RefGen V2	χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0623992' Biased in favor of strain: ''
GRMZM2G121565	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6733 x 10^-3	80	18	80	67	81.63%	45.58%	98	147	RefGen V2	χ2 p-value for B73 x Mo17: '.0016733' χ2 p-value for Mo17 x B73: '5.83e-08' Biased in favor of strain: 'B73'
GRMZM2G121546	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	2.91 x 10^-11	547	78	160	575	87.52%	78.23%	625	735	RefGen V2	χ2 p-value for B73 x Mo17: '1.98e-28' χ2 p-value for Mo17 x B73: '2.91e-11' Biased in favor of strain: ''
GRMZM2G121546	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3539 x 10^-3	113	13	22	49	89.68%	69.01%	126	71	RefGen V2	χ2 p-value for B73 x Mo17: '5.16e-19' χ2 p-value for Mo17 x B73: '.0013539' Biased in favor of strain: ''
GRMZM2G121543	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.929801 x 10^-1	6	8	8	12	42.86%	60.00%	14	20	RefGen V2	χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.3710934' Biased in favor of strain: ''
GRMZM2G121543	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.048367 x 10^-1	19	4	26	17	82.61%	39.53%	23	43	RefGen V2	χ2 p-value for B73 x Mo17: '.1048367' χ2 p-value for Mo17 x B73: '.0001606' Biased in favor of strain: ''
GRMZM2G121520	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.578989 x 10^-1	32	5	11	14	86.49%	56.00%	37	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0105449' χ2 p-value for Mo17 x B73: '.2578989' Biased in favor of strain: ''
GRMZM2G121520	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.706 x 10^-3	68	41	72	37	62.39%	33.94%	109	109	RefGen V2	χ2 p-value for B73 x Mo17: '.009706' χ2 p-value for Mo17 x B73: '.0008012' Biased in favor of strain: 'B73'
GRMZM2G121516	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.360134 x 10^-1	50	44	41	25	53.19%	37.88%	94	66	RefGen V2	χ2 p-value for B73 x Mo17: '.5360134' χ2 p-value for Mo17 x B73: '.0488998' Biased in favor of strain: ''
GRMZM2G121516	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.89 x 10^-5	66	9	61	32	88.00%	34.41%	75	93	RefGen V2	χ2 p-value for B73 x Mo17: '.0000889' χ2 p-value for Mo17 x B73: '4.14e-11' Biased in favor of strain: 'B73'
GRMZM2G121514	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.28 x 10^-5	441	367	285	749	54.58%	72.44%	808	1034	RefGen V2	χ2 p-value for B73 x Mo17: '3.13e-13' χ2 p-value for Mo17 x B73: '.0000828' Biased in favor of strain: 'Mo17'
GRMZM2G121514	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1080	178	1208	264	85.85%	17.93%	1258	1472	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121510	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.021211 x 10^-1	141	116	106	116	54.86%	52.25%	257	222	RefGen V2	χ2 p-value for B73 x Mo17: '.1188882' χ2 p-value for Mo17 x B73: '.5021211' Biased in favor of strain: ''
GRMZM2G121510	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.55054 x 10^-2	232	55	91	131	80.84%	59.01%	287	222	RefGen V2	χ2 p-value for B73 x Mo17: '3.54e-07' χ2 p-value for Mo17 x B73: '.0155054' Biased in favor of strain: ''
GRMZM2G121495	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.215 x 10^-4	68	10	44	14	87.18%	24.14%	78	58	RefGen V2	χ2 p-value for B73 x Mo17: '.0001215' χ2 p-value for Mo17 x B73: '6.39e-12' Biased in favor of strain: 'B73'
GRMZM2G121495	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.763445 x 10^-1	86	98	113	79	46.74%	41.15%	184	192	RefGen V2	χ2 p-value for B73 x Mo17: '.3763445' χ2 p-value for Mo17 x B73: '.014138' Biased in favor of strain: ''
GRMZM2G121468	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.327676 x 10^-1	15	8	15	11	65.22%	42.31%	23	26	RefGen V2	χ2 p-value for B73 x Mo17: '.1443998' χ2 p-value for Mo17 x B73: '.4327676' Biased in favor of strain: ''
GRMZM2G121468	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.149149 x 10^-1	8	10	7	27	44.44%	79.41%	18	34	RefGen V2	χ2 p-value for B73 x Mo17: '.0454974' χ2 p-value for Mo17 x B73: '.1149149' Biased in favor of strain: ''
GRMZM2G121458	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.039	1	28	3	20	3.45%	86.96%	29	23	RefGen V2	χ2 p-value for B73 x Mo17: '5.13e-13' χ2 p-value for Mo17 x B73: '.039' Biased in favor of strain: ''
GRMZM2G121458	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0172 x 10^-3	13	36	7	30	26.53%	81.08%	49	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0010172' χ2 p-value for Mo17 x B73: '.0001561' Biased in favor of strain: 'Mo17'
GRMZM2G121456	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	5	5	3	64.29%	37.50%	14	8	RefGen V2	χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G121456	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.63816 x 10^-1	11	6	4	7	64.71%	63.64%	17	11	RefGen V2	χ2 p-value for B73 x Mo17: '.863816' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: ''
GRMZM2G121427	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	6	4	100.00%	40.00%	8	10	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0736382' Biased in favor of strain: ''
GRMZM2G121427	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.122405 x 10^-1	45	15	40	27	75.00%	40.30%	60	67	RefGen V2	χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.1122405' Biased in favor of strain: ''
GRMZM2G121404	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.87 x 10^-28	767	310	574	259	71.22%	31.09%	1077	833	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.87e-28' Biased in favor of strain: 'B73'
GRMZM2G121404	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	1130	200	503	492	84.96%	49.45%	1330	995	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.02e-30' Biased in favor of strain: 'B73'
GRMZM2G121374	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	8	0	15	11.11%	100.00%	9	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0004069' χ2 p-value for Mo17 x B73: '.0061699' Biased in favor of strain: ''
GRMZM2G121374	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6162 x 10^-3	2	15	1	24	11.76%	96.00%	17	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0016162' χ2 p-value for Mo17 x B73: '4.22e-06' Biased in favor of strain: 'Mo17'
GRMZM2G121360	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	491	122	673	149	80.10%	18.13%	613	822	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121360	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	1	0	3	90.00%	100.00%	10	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1175272' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G121354	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.61 x 10^-13	0	77	2	113	0.00%	98.26%	77	115	RefGen V2	χ2 p-value for B73 x Mo17: '2.31e-35' χ2 p-value for Mo17 x B73: '6.61e-13' Biased in favor of strain: 'Mo17'
GRMZM2G121354	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.8 x 10^-26	1	113	0	110	0.88%	100.00%	114	110	RefGen V2	χ2 p-value for B73 x Mo17: '9.63e-26' χ2 p-value for Mo17 x B73: '9.80e-26' Biased in favor of strain: 'Mo17'
GRMZM2G121333	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.50891 x 10^-2	35	13	22	35	72.92%	61.40%	48	57	RefGen V2	χ2 p-value for B73 x Mo17: '.0014962' χ2 p-value for Mo17 x B73: '.0850891' Biased in favor of strain: ''
GRMZM2G121333	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.22431 x 10^-1	89	51	36	63	63.57%	63.64%	140	99	RefGen V2	χ2 p-value for B73 x Mo17: '.437184' χ2 p-value for Mo17 x B73: '.522431' Biased in favor of strain: ''
GRMZM2G121313	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	8	3	100.00%	27.27%	2	11	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.005578' Biased in favor of strain: ''
GRMZM2G121313	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	15	1	100.00%	6.25%	1	16	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: ''
GRMZM2G121312	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	1	6	3	92.31%	33.33%	13	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0022819' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G121312	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G121309	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G121309	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	0	5	25.00%	100.00%	4	5	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G121303	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.850628 x 10^-1	81	112	59	62	41.97%	51.24%	193	121	RefGen V2	χ2 p-value for B73 x Mo17: '.0256527' χ2 p-value for Mo17 x B73: '.7850628' Biased in favor of strain: ''
GRMZM2G121303	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.41 x 10^-5	57	62	24	135	47.90%	84.91%	119	159	RefGen V2	χ2 p-value for B73 x Mo17: '.0000141' χ2 p-value for Mo17 x B73: '1.07e-06' Biased in favor of strain: 'Mo17'
GRMZM2G121293	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		89	0	2	7	100.00%	77.78%	89	9	RefGen V2	χ2 p-value for B73 x Mo17: '2.54e-11' χ2 p-value for Mo17 x B73: '.4795002' Biased in favor of strain: ''
GRMZM2G121293	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	276	53	422	93	83.89%	18.06%	329	515	RefGen V2	χ2 p-value for B73 x Mo17: '9.71e-35' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121269	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.63 x 10^-7	138	66	124	49	67.65%	28.32%	204	173	RefGen V2	χ2 p-value for B73 x Mo17: '4.63e-07' χ2 p-value for Mo17 x B73: '1.18e-08' Biased in favor of strain: 'B73'
GRMZM2G121269	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4337 x 10^-3	114	32	56	45	78.08%	44.55%	146	101	RefGen V2	χ2 p-value for B73 x Mo17: '.0034337' χ2 p-value for Mo17 x B73: '2.43e-06' Biased in favor of strain: 'B73'
GRMZM2G121262	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.421657 x 10^-1	52	25	32	63	67.53%	66.32%	77	95	RefGen V2	χ2 p-value for B73 x Mo17: '.8719961' χ2 p-value for Mo17 x B73: '.9421657' Biased in favor of strain: ''
GRMZM2G121262	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.738009 x 10^-1	223	190	157	177	54.00%	52.99%	413	334	RefGen V2	χ2 p-value for B73 x Mo17: '.1044134' χ2 p-value for Mo17 x B73: '.2738009' Biased in favor of strain: ''
GRMZM2G121237	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	959	365	939	411	72.43%	30.44%	1324	1350	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121237	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.0 x 10^-30	2120	636	1567	1568	76.92%	50.02%	2756	3135	RefGen V2	χ2 p-value for B73 x Mo17: '3.26e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G121229	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.554568 x 10^-1	53	34	97	100	60.92%	50.76%	87	197	RefGen V2	χ2 p-value for B73 x Mo17: '.2554568' χ2 p-value for Mo17 x B73: '2.18e-06' Biased in favor of strain: ''
GRMZM2G121229	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.562984 x 10^-1	106	20	55	49	84.13%	47.12%	126	104	RefGen V2	χ2 p-value for B73 x Mo17: '1.84e-14' χ2 p-value for Mo17 x B73: '.5562984' Biased in favor of strain: ''
GRMZM2G121228	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G121228	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	1	100.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G121210	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3072	2117	2496	1705	59.20%	40.59%	5189	4201	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.96e-34' Biased in favor of strain: 'B73'
GRMZM2G121210	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.939876 x 10^-1	114	62	124	151	64.77%	54.91%	176	275	RefGen V2	χ2 p-value for B73 x Mo17: '.5939876' χ2 p-value for Mo17 x B73: '.0000353' Biased in favor of strain: ''
GRMZM2G121208	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.12286 x 10^-2	23	4	15	14	85.19%	48.28%	27	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0412286' χ2 p-value for Mo17 x B73: '.0356495' Biased in favor of strain: ''
GRMZM2G121208	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.18 x 10^-11	63	7	102	5	90.00%	4.67%	70	107	RefGen V2	χ2 p-value for B73 x Mo17: '2.18e-11' χ2 p-value for Mo17 x B73: '6.77e-21' Biased in favor of strain: 'B73'
GRMZM2G121200	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	1	100.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G121200	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G121189	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.15452 x 10^-2	77	26	52	57	74.76%	52.29%	103	109	RefGen V2	χ2 p-value for B73 x Mo17: '.0815452' χ2 p-value for Mo17 x B73: '.0014564' Biased in favor of strain: ''
GRMZM2G121189	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		27	3	4	3	90.00%	42.86%	30	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0000118' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: ''
GRMZM2G121186	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.69 x 10^-25	2367	1343	2176	1544	63.80%	41.51%	3710	3720	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.69e-25' Biased in favor of strain: 'B73'
GRMZM2G121186	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5469	1663	3129	4216	76.68%	57.40%	7132	7345	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'

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