Displaying data sets 18101 - 18200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G40910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.55013 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.24956 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.541437'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G40900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.44758 x 10-1 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 15 10 60.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40890 CLC-A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 1 0 100.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001514'
Avg. expression score for this sample: '2.3582'
Avg. expression score in LCM sample: '.999458'
Tissue used: 'pure endosperm, no chalazal'
AT5G40890 CLC-A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.293 x 10-3 6 1 0 28 85.71% 100.00% 7 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001514'
Avg. expression score for this sample: '9.30869'
Avg. expression score in LCM sample: '.999458'
Tissue used: 'full endosperm'
AT5G40890 CLC-A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 7 1 1 41.67% 50.00% 12 2 TAIR8 Avg. embryo expression (dissected): '4.87506'
Avg. embryo expression (LCM): '0'
AT5G40890 CLC-A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40890 CLC-A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40890 CLC-A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.79825 x 10-1 55 0 100.00% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.046584'
Avg. expression score for this sample: '61.4697'
Avg. expression score in LCM sample: '51.722'
Tissue used: 'pure endosperm, no chalazal'
AT5G40880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.10526 x 10-1 3 0 0 7 100.00% 100.00% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.046584'
Avg. expression score for this sample: '82.6098'
Avg. expression score in LCM sample: '51.722'
Tissue used: 'full endosperm'
AT5G40880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '28.0616'
Avg. embryo expression (LCM): '30.6429'
AT5G40880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.22807 x 10-1 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7922 x 10-2 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40870 UK/UPRT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.35122 x 10-1 84 33 32 67 71.79% 67.68% 117 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014734'
Avg. expression score for this sample: '103.804'
Avg. expression score in LCM sample: '139.909'
Tissue used: 'pure endosperm, no chalazal'
AT5G40870 UK/UPRT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1917 x 10-2 154 51 47 141 75.12% 75.00% 205 188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014734'
Avg. expression score for this sample: '169.575'
Avg. expression score in LCM sample: '139.909'
Tissue used: 'full endosperm'
AT5G40870 UK/UPRT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.9697 x 10-2 125 95 37 50 56.82% 57.47% 220 87 TAIR8 Avg. embryo expression (dissected): '196.153'
Avg. embryo expression (LCM): '200.611'
AT5G40870 UK/UPRT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.90869 x 10-1 86 24 78.18% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40870 UK/UPRT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.84876 x 10-1 383 129 74.80% 512 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40870 UK/UPRT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5633 x 10-2 288 78 78.69% 366 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G40860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40855 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.10383'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40855 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.83322'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40855 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.61474'
Avg. embryo expression (LCM): '0'
AT5G40855 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40855 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40855 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40850 UPM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.65322 x 10-1 9 1 2 11 90.00% 84.62% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0381'
Avg. expression score for this sample: '34.4862'
Avg. expression score in LCM sample: '25.5597'
Tissue used: 'pure endosperm, no chalazal'
AT5G40850 UPM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.79044 x 10-1 16 3 7 26 84.21% 78.79% 19 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0381'
Avg. expression score for this sample: '49.7893'
Avg. expression score in LCM sample: '25.5597'
Tissue used: 'full endosperm'
AT5G40850 UPM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 13 0 6 40.91% 100.00% 22 6 TAIR8 Avg. embryo expression (dissected): '52.1053'
Avg. embryo expression (LCM): '62.6924'
AT5G40850 UPM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.78256 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40850 UPM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.70801 x 10-1 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40850 UPM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.09393 x 10-1 21 2 91.30% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40847 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40847 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40847 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G40847 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40847 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40847 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40840 SYN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 19 8 10 16 70.37% 61.54% 27 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.157337'
Avg. expression score for this sample: '5.57274'
Avg. expression score in LCM sample: '6.55527'
Tissue used: 'pure endosperm, no chalazal'
AT5G40840 SYN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.13276 x 10-1 20 20 26 35 50.00% 57.38% 40 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.157337'
Avg. expression score for this sample: '8.90276'
Avg. expression score in LCM sample: '6.55527'
Tissue used: 'full endosperm'
AT5G40840 SYN2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.56105 x 10-1 28 17 7 6 62.22% 46.15% 45 13 TAIR8 Avg. embryo expression (dissected): '10.0871'
Avg. embryo expression (LCM): '17.268'
AT5G40840 SYN2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.14029 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40840 SYN2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.81406 x 10-1 22 25 46.81% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40840 SYN2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-7 86 11 88.66% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.806 x 10-3 86 16 30 84 84.31% 73.68% 102 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.9e-06'
Avg. expression score for this sample: '35.593'
Avg. expression score in LCM sample: '33.6141'
Tissue used: 'pure endosperm, no chalazal'
AT5G40830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.44 x 10-4 134 59 32 187 69.43% 85.39% 193 219 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.9e-06'
Avg. expression score for this sample: '53.3391'
Avg. expression score in LCM sample: '33.6141'
Tissue used: 'full endosperm'
AT5G40830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.03 x 10-4 24 74 21 11 24.49% 34.38% 98 32 TAIR8 Avg. embryo expression (dissected): '37.962'
Avg. embryo expression (LCM): '52.0051'
AT5G40830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.965 x 10-3 55 4 93.22% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3 x 10-13 369 23 94.13% 392 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2 x 10-26 544 14 97.49% 558 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40820 ATR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.79595 x 10-1 32 14 17 37 69.57% 68.52% 46 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.142792'
Avg. expression score for this sample: '5.80428'
Avg. expression score in LCM sample: '9.28908'
Tissue used: 'pure endosperm, no chalazal'
AT5G40820 ATR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.41303 x 10-1 79 29 28 81 73.15% 74.31% 108 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.142792'
Avg. expression score for this sample: '9.13856'
Avg. expression score in LCM sample: '9.28908'
Tissue used: 'full endosperm'
AT5G40820 ATR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.67542 x 10-1 85 65 25 25 56.67% 50.00% 150 50 TAIR8 Avg. embryo expression (dissected): '18.5364'
Avg. embryo expression (LCM): '24.3636'
AT5G40820 ATR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.9591 x 10-2 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40820 ATR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.5 x 10-6 74 76 49.33% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40820 ATR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.52889 x 10-1 216 69 75.79% 285 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.25132 x 10-1 292 125 137 202 70.02% 59.59% 417 339 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088048'
Avg. expression score for this sample: '209.038'
Avg. expression score in LCM sample: '172.48'
Tissue used: 'pure endosperm, no chalazal'
AT5G40810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.715 x 10-3 251 88 116 321 74.04% 73.46% 339 437 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.088048'
Avg. expression score for this sample: '142.252'
Avg. expression score in LCM sample: '172.48'
Tissue used: 'full endosperm'
AT5G40810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.491 x 10-3 391 276 76 75 58.62% 49.67% 667 151 TAIR8 Avg. embryo expression (dissected): '327.692'
Avg. embryo expression (LCM): '334.108'
AT5G40810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.945 x 10-2 100 30 76.92% 130 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2294 x 10-2 620 223 73.55% 843 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9 x 10-27 755 100 88.30% 855 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 2 0 66.67% 0.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.682363'
Avg. expression score for this sample: '4.41851'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 20 3 14 10 86.96% 41.67% 23 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.682363'
Avg. expression score for this sample: '20.272'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.7794 x 10-2 22 11 9 20 66.67% 68.97% 33 29 TAIR8 Avg. embryo expression (dissected): '76.6269'
Avg. embryo expression (LCM): '4.609'
AT5G40800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.57233 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.2492'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.0862'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '202.311'
Avg. embryo expression (LCM): '23.4343'
AT5G40790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40780 LHT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.4706'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G40780 LHT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.5576'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G40780 LHT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '10.1616'
Avg. embryo expression (LCM): '6.63093'
AT5G40780 LHT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40780 LHT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40780 LHT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40770 PHB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.94759 x 10-1 58 47 30 62 55.24% 67.39% 105 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '140.948'
Avg. expression score in LCM sample: '34.2902'
Tissue used: 'pure endosperm, no chalazal'
AT5G40770 PHB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.64054 x 10-1 55 32 32 109 63.22% 77.30% 87 141 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '109.273'
Avg. expression score in LCM sample: '34.2902'
Tissue used: 'full endosperm'
AT5G40770 PHB3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.393 x 10-3 185 303 29 39 37.91% 57.35% 488 68 TAIR8 Avg. embryo expression (dissected): '526.577'
Avg. embryo expression (LCM): '405.416'
AT5G40770 PHB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.9343 x 10-2 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40770 PHB3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.96134 x 10-1 407 184 68.87% 591 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40770 PHB3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-5 321 79 80.25% 400 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G40760 G6PD6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '363.528'
Avg. expression score in LCM sample: '172.465'
Tissue used: 'pure endosperm, no chalazal'
AT5G40760 G6PD6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '506.096'
Avg. expression score in LCM sample: '172.465'
Tissue used: 'full endosperm'