Displaying data sets 17901 - 18000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G41210 GSTT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.28581 x 10-1 8 23 6 6 25.81% 50.00% 31 12 TAIR8 Avg. embryo expression (dissected): '42.74'
Avg. embryo expression (LCM): '32.8281'
AT5G41210 GSTT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.9849 x 10-1 17 3 85.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41210 GSTT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.26564 x 10-1 48 12 80.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41210 GSTT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.70344 x 10-1 78 19 80.41% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41200 AGL75 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '1.48449'
Tissue used: 'pure endosperm, no chalazal'
AT5G41200 AGL75 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.168476'
Avg. expression score in LCM sample: '1.48449'
Tissue used: 'full endosperm'
AT5G41200 AGL75 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G41200 AGL75 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41200 AGL75 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41200 AGL75 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.57122 x 10-1 1137 560 609 1129 67.00% 64.96% 1697 1738 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00039'
Avg. expression score for this sample: '359.713'
Avg. expression score in LCM sample: '195.394'
Tissue used: 'pure endosperm, no chalazal'
AT5G41190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2 x 10-8 1228 515 553 1583 70.45% 74.11% 1743 2136 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00039'
Avg. expression score for this sample: '272.96'
Avg. expression score in LCM sample: '195.394'
Tissue used: 'full endosperm'
AT5G41190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.516 x 10-2 1444 1154 411 267 55.58% 39.38% 2598 678 TAIR8 Avg. embryo expression (dissected): '541.427'
Avg. embryo expression (LCM): '600.313'
AT5G41190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.094 x 10-3 432 243 64.00% 675 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9 x 10-11 2025 635 76.13% 2660 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2352 562 80.71% 2914 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.76066 x 10-1 9 4 7 6 69.23% 46.15% 13 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.2839'
Avg. expression score in LCM sample: '16.8585'
Tissue used: 'pure endosperm, no chalazal'
AT5G41180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 5 6 16 66.67% 72.73% 15 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.5962'
Avg. expression score in LCM sample: '16.8585'
Tissue used: 'full endosperm'
AT5G41180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 8 8 7 0 50.00% 0.00% 16 7 TAIR8 Avg. embryo expression (dissected): '27.149'
Avg. embryo expression (LCM): '20.2695'
AT5G41180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.94346 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.63208 x 10-1 56 19 74.67% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.56179 x 10-1 28 8 77.78% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.68813 x 10-1 8 4 6 7 66.67% 53.85% 12 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.561408'
Avg. expression score for this sample: '6.14797'
Avg. expression score in LCM sample: '9.11271'
Tissue used: 'pure endosperm, no chalazal'
AT5G41170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.95217 x 10-1 30 7 15 30 81.08% 66.67% 37 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.561408'
Avg. expression score for this sample: '11.4273'
Avg. expression score in LCM sample: '9.11271'
Tissue used: 'full endosperm'
AT5G41170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 7 6 1 6 53.85% 85.71% 13 7 TAIR8 Avg. embryo expression (dissected): '10.3042'
Avg. embryo expression (LCM): '16.1629'
AT5G41170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.9545 x 10-1 153 61 71.50% 214 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.53292 x 10-1 114 35 76.51% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41160 PUP12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.967 x 10-2 1031 619 596 1174 62.48% 66.33% 1650 1770 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438233'
Avg. expression score for this sample: '880.748'
Avg. expression score in LCM sample: '340.124'
Tissue used: 'pure endosperm, no chalazal'
AT5G41160 PUP12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23574 x 10-1 1102 449 364 625 71.05% 63.20% 1551 989 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.438233'
Avg. expression score for this sample: '478.714'
Avg. expression score in LCM sample: '340.124'
Tissue used: 'full endosperm'
AT5G41160 PUP12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.65456 x 10-1 906 964 296 341 48.45% 53.53% 1870 637 TAIR8 Avg. embryo expression (dissected): '1040.78'
Avg. embryo expression (LCM): '463.361'
AT5G41160 PUP12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2 x 10-5 158 40 79.80% 198 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41160 PUP12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.54176 x 10-1 241 111 68.47% 352 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41160 PUP12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.48 x 10-4 209 159 56.79% 368 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41150 UVH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 72 34 36 72 67.92% 66.67% 106 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.726749'
Avg. expression score for this sample: '31.9392'
Avg. expression score in LCM sample: '16.7997'
Tissue used: 'pure endosperm, no chalazal'
AT5G41150 UVH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.77246 x 10-1 182 51 95 126 78.11% 57.01% 233 221 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.726749'
Avg. expression score for this sample: '50.4403'
Avg. expression score in LCM sample: '16.7997'
Tissue used: 'full endosperm'
AT5G41150 UVH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.78209 x 10-1 94 87 23 29 51.93% 55.77% 181 52 TAIR8 Avg. embryo expression (dissected): '44.5689'
Avg. embryo expression (LCM): '58.209'
AT5G41150 UVH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 15 7 68.18% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41150 UVH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.92698 x 10-1 204 79 72.08% 283 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41150 UVH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8 x 10-16 327 39 89.34% 366 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7 x 10-8 918 322 217 665 74.03% 75.40% 1240 882 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '196.165'
Avg. expression score in LCM sample: '45.9604'
Tissue used: 'pure endosperm, no chalazal'
AT5G41140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1946 512 499 2185 79.17% 81.41% 2458 2684 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '306.074'
Avg. expression score in LCM sample: '45.9604'
Tissue used: 'full endosperm'
AT5G41140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 434 446 127 141 49.32% 52.61% 880 268 TAIR8 Avg. embryo expression (dissected): '159.329'
Avg. embryo expression (LCM): '119.244'
AT5G41140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.92362 x 10-1 270 71 79.18% 341 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 3609 132 96.47% 3741 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4906 33 99.33% 4939 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.41408 x 10-1 33 9 19 36 78.57% 65.45% 42 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.327309'
Avg. expression score for this sample: '50.5315'
Avg. expression score in LCM sample: '95.5511'
Tissue used: 'pure endosperm, no chalazal'
AT5G41130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.45755 x 10-1 34 15 13 39 69.39% 75.00% 49 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.327309'
Avg. expression score for this sample: '42.0654'
Avg. expression score in LCM sample: '95.5511'
Tissue used: 'full endosperm'
AT5G41130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 13 13 8 6 50.00% 42.86% 26 14 TAIR8 Avg. embryo expression (dissected): '23.4116'
Avg. embryo expression (LCM): '35.7166'
AT5G41130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.91142 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.84567 x 10-1 18 11 62.07% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.363 x 10-3 30 2 93.75% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.86903'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'pure endosperm, no chalazal'
AT5G41120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.64089'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'full endosperm'
AT5G41120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.58941'
Avg. embryo expression (LCM): '10.8255'
AT5G41120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.98387 x 10-1 9 7 6 11 56.25% 64.71% 16 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.864356'
Avg. expression score for this sample: '43.9197'
Avg. expression score in LCM sample: '45.8134'
Tissue used: 'pure endosperm, no chalazal'
AT5G41110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 16 7 7 13 69.57% 65.00% 23 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.864356'
Avg. expression score for this sample: '59.472'
Avg. expression score in LCM sample: '45.8134'
Tissue used: 'full endosperm'
AT5G41110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 5 4 4 50.00% 50.00% 10 8 TAIR8 Avg. embryo expression (dissected): '28.2728'
Avg. embryo expression (LCM): '8.10028'
AT5G41110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.3991 x 10-2 3 6 33.33% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2585 x 10-2 37 7 84.09% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.55 x 10-4 33 2 94.29% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41109 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.2889'
Avg. expression score in LCM sample: '62.9953'
Tissue used: 'pure endosperm, no chalazal'
AT5G41109 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '56.0855'
Avg. expression score in LCM sample: '62.9953'
Tissue used: 'full endosperm'
AT5G41109 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '32.542'
Avg. embryo expression (LCM): '8.96682'
AT5G41109 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41109 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41109 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 6 5 15 62.50% 75.00% 16 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.578366'
Avg. expression score for this sample: '68.372'
Avg. expression score in LCM sample: '18.4606'
Tissue used: 'pure endosperm, no chalazal'
AT5G41100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.1777 x 10-1 25 10 14 36 71.43% 72.00% 35 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.578366'
Avg. expression score for this sample: '106.751'
Avg. expression score in LCM sample: '18.4606'
Tissue used: 'full endosperm'
AT5G41100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 24 29 8 14 45.28% 63.64% 53 22 TAIR8 Avg. embryo expression (dissected): '182.67'
Avg. embryo expression (LCM): '60.2812'
AT5G41100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.35521 x 10-1 21 6 77.78% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.91185 x 10-1 31 7 81.58% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41090 NAC095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G41090 NAC095 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.11446'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G41090 NAC095 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G41090 NAC095 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41090 NAC095 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41090 NAC095 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41080 GDPD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '354.282'
Avg. expression score in LCM sample: '59.556'
Tissue used: 'pure endosperm, no chalazal'
AT5G41080 GDPD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '571.586'
Avg. expression score in LCM sample: '59.556'
Tissue used: 'full endosperm'
AT5G41080 GDPD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '51.2316'
Avg. embryo expression (LCM): '6.3672'
AT5G41080 GDPD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41080 GDPD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41080 GDPD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41071 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.29404'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G41071 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.98233'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G41071 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '10.471'
Avg. embryo expression (LCM): '0'
AT5G41071 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41071 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41071 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41070 DRB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.24848 x 10-1 19 8 9 8 70.37% 47.06% 27 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.119454'
Avg. expression score for this sample: '41.63'
Avg. expression score in LCM sample: '3.02777'
Tissue used: 'pure endosperm, no chalazal'
AT5G41070 DRB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2266 x 10-2 26 8 4 37 76.47% 90.24% 34 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.119454'
Avg. expression score for this sample: '70.2933'
Avg. expression score in LCM sample: '3.02777'
Tissue used: 'full endosperm'
AT5G41070 DRB5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.16696 x 10-1 30 17 15 9 63.83% 37.50% 47 24 TAIR8 Avg. embryo expression (dissected): '113.346'
Avg. embryo expression (LCM): '114.723'
AT5G41070 DRB5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.405 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41070 DRB5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41070 DRB5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'