| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G124593 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.320314 x 10-1 | 162 | 136 | 136 | 98 | 54.36% | 41.88% | 298 | 234 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1320314' χ2 p-value for Mo17 x B73: '.0129866' Biased in favor of strain: '' |
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| GRMZM2G124593 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.44 x 10-5 | 333 | 106 | 356 | 277 | 75.85% | 43.76% | 439 | 633 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000444' χ2 p-value for Mo17 x B73: '2.27e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G124576 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 3 | 5 | 4 | 66.67% | 44.44% | 9 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999862' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: '' |
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| GRMZM2G124576 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 6 | 3 | 4 | 50.00% | 57.14% | 12 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G124567 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.574625 x 10-1 | 11 | 15 | 16 | 15 | 42.31% | 48.39% | 26 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4327676' χ2 p-value for Mo17 x B73: '.8574625' Biased in favor of strain: '' |
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| GRMZM2G124567 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124566 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124566 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.52 x 10-22 | 320 | 116 | 339 | 99 | 73.39% | 22.60% | 436 | 438 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.52e-22' χ2 p-value for Mo17 x B73: '1.92e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G124563 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.691714 x 10-1 | 13 | 18 | 2 | 9 | 41.94% | 81.82% | 31 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3691714' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM2G124563 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 6 | 10 | 83.33% | 62.50% | 6 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.7236735' Biased in favor of strain: '' |
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| GRMZM2G124560 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6 x 10-24 | 0 | 144 | 0 | 207 | 0.00% | 100.00% | 144 | 207 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.60e-24' Biased in favor of strain: 'Mo17' |
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| GRMZM2G124560 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.42 x 10-19 | 3 | 175 | 4 | 91 | 1.69% | 95.79% | 178 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.00e-38' χ2 p-value for Mo17 x B73: '4.42e-19' Biased in favor of strain: 'Mo17' |
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| GRMZM2G124557 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.9751 x 10-3 | 175 | 130 | 188 | 134 | 57.38% | 41.61% | 305 | 322 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0099751' χ2 p-value for Mo17 x B73: '.0026185' Biased in favor of strain: 'B73' |
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| GRMZM2G124557 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.255177 x 10-1 | 106 | 106 | 81 | 173 | 50.00% | 68.11% | 212 | 254 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.63e-07' χ2 p-value for Mo17 x B73: '.6255177' Biased in favor of strain: '' |
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| GRMZM2G124550 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.523196 x 10-1 | 384 | 208 | 264 | 619 | 64.86% | 70.10% | 592 | 883 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3523196' χ2 p-value for Mo17 x B73: '.0303542' Biased in favor of strain: '' |
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| GRMZM2G124550 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.36 x 10-5 | 225 | 322 | 121 | 196 | 41.13% | 61.83% | 547 | 317 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000336' χ2 p-value for Mo17 x B73: '.0000253' Biased in favor of strain: 'Mo17' |
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| GRMZM2G124540 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.572992 x 10-1 | 202 | 120 | 132 | 110 | 62.73% | 45.45% | 322 | 242 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.88e-06' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G124540 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.03 x 10-20 | 1002 | 266 | 660 | 554 | 79.02% | 45.63% | 1268 | 1214 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.03e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124532 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.173381 x 10-1 | 114 | 48 | 67 | 102 | 70.37% | 60.36% | 162 | 169 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173381' χ2 p-value for Mo17 x B73: '.0817588' Biased in favor of strain: '' |
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| GRMZM2G124532 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.263 x 10-4 | 118 | 66 | 145 | 53 | 64.13% | 26.77% | 184 | 198 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001263' χ2 p-value for Mo17 x B73: '6.23e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G124530 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9807 x 10-3 | 207 | 140 | 199 | 144 | 59.65% | 41.98% | 347 | 343 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003222' χ2 p-value for Mo17 x B73: '.0029807' Biased in favor of strain: 'B73' |
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| GRMZM2G124530 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 1 | 7 | 2 | 87.50% | 22.22% | 8 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G124524 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 14 | 9 | 100.00% | 39.13% | 6 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0050882' Biased in favor of strain: '' |
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| GRMZM2G124524 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 900 | 319 | 986 | 288 | 73.83% | 22.61% | 1219 | 1274 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124502 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.64574 x 10-2 | 66 | 42 | 46 | 30 | 61.11% | 39.47% | 108 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0209213' χ2 p-value for Mo17 x B73: '.0664574' Biased in favor of strain: '' |
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| GRMZM2G124502 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.365691 x 10-1 | 13 | 2 | 15 | 32 | 86.67% | 68.09% | 15 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1003509' χ2 p-value for Mo17 x B73: '.8365691' Biased in favor of strain: '' |
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| GRMZM2G124495 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124495 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124476 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.445193 x 10-1 | 465 | 471 | 478 | 562 | 49.68% | 54.04% | 936 | 1040 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8445193' χ2 p-value for Mo17 x B73: '.0091947' Biased in favor of strain: '' |
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| GRMZM2G124476 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.114673 x 10-1 | 595 | 364 | 291 | 617 | 62.04% | 67.95% | 959 | 908 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0023892' χ2 p-value for Mo17 x B73: '.4114673' Biased in favor of strain: '' |
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| GRMZM2G124473 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 9 | 3 | 25.00% | 25.00% | 4 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.0021996' Biased in favor of strain: '' |
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| GRMZM2G124473 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.236736 x 10-1 | 14 | 19 | 17 | 15 | 42.42% | 46.88% | 33 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3840882' χ2 p-value for Mo17 x B73: '.7236736' Biased in favor of strain: '' |
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| GRMZM2G124466 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.74 x 10-6 | 206 | 123 | 240 | 94 | 62.61% | 28.14% | 329 | 334 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.74e-06' χ2 p-value for Mo17 x B73: '1.36e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G124466 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.845 x 10-4 | 167 | 45 | 77 | 84 | 78.77% | 52.17% | 212 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001845' χ2 p-value for Mo17 x B73: '.0000958' Biased in favor of strain: 'B73' |
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| GRMZM2G124460 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.59 x 10-9 | 93 | 6 | 92 | 26 | 93.94% | 22.03% | 99 | 118 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.59e-09' χ2 p-value for Mo17 x B73: '8.24e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G124460 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.2 x 10-29 | 224 | 20 | 167 | 16 | 91.80% | 8.74% | 244 | 183 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.24e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G124455 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G124455 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124441 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.36 x 10-6 | 4091 | 1703 | 2378 | 4228 | 70.61% | 64.00% | 5794 | 6606 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.98e-10' χ2 p-value for Mo17 x B73: '4.36e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G124441 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.117287 x 10-1 | 1920 | 1474 | 1698 | 1626 | 56.57% | 48.92% | 3394 | 3324 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.92e-14' χ2 p-value for Mo17 x B73: '.2117287' Biased in favor of strain: '' |
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| GRMZM2G124434 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1081 | 264 | 1115 | 382 | 80.37% | 25.52% | 1345 | 1497 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124434 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18226 x 10-2 | 93 | 27 | 100 | 39 | 77.50% | 28.06% | 120 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0118226' χ2 p-value for Mo17 x B73: '4.63e-22' Biased in favor of strain: '' |
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| GRMZM2G124423 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.596839 x 10-1 | 23 | 5 | 5 | 11 | 82.14% | 68.75% | 28 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0823556' χ2 p-value for Mo17 x B73: '.8596839' Biased in favor of strain: '' |
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| GRMZM2G124423 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.0234 x 10-3 | 122 | 81 | 81 | 51 | 60.10% | 38.64% | 203 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040067' χ2 p-value for Mo17 x B73: '.0090234' Biased in favor of strain: 'B73' |
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| GRMZM2G124421 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.316146 x 10-1 | 13 | 10 | 6 | 13 | 56.52% | 68.42% | 23 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5316146' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: '' |
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| GRMZM2G124421 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 4 | 4 | 40.00% | 50.00% | 5 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: '' |
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| GRMZM2G124417 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 9 | 5 | 40 | 0.00% | 88.89% | 9 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000221' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G124417 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.74 x 10-5 | 6 | 50 | 17 | 51 | 10.71% | 75.00% | 56 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.11e-09' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'Mo17' |
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| GRMZM2G124416 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.9579 x 10-3 | 67 | 35 | 72 | 42 | 65.69% | 36.84% | 102 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015324' χ2 p-value for Mo17 x B73: '.0049579' Biased in favor of strain: 'B73' |
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| GRMZM2G124416 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.380106 x 10-1 | 91 | 25 | 44 | 66 | 78.45% | 60.00% | 116 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.007108' χ2 p-value for Mo17 x B73: '.1380106' Biased in favor of strain: '' |
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| GRMZM2G124411 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 13123 | 2603 | 6218 | 4795 | 83.45% | 43.54% | 15726 | 11013 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124411 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 6075 | 2304 | 5127 | 2685 | 72.50% | 34.37% | 8379 | 7812 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124409 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 817 | 220 | 796 | 216 | 78.78% | 21.34% | 1037 | 1012 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124409 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.83207 x 10-2 | 23 | 2 | 13 | 10 | 92.00% | 43.48% | 25 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0072099' χ2 p-value for Mo17 x B73: '.0183207' Biased in favor of strain: '' |
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| GRMZM2G124377 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.442465 x 10-1 | 86 | 37 | 40 | 61 | 69.92% | 60.40% | 123 | 101 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4442465' χ2 p-value for Mo17 x B73: '.1812762' Biased in favor of strain: '' |
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| GRMZM2G124377 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.769821 x 10-1 | 170 | 146 | 185 | 125 | 53.80% | 40.32% | 316 | 310 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1769821' χ2 p-value for Mo17 x B73: '.000655' Biased in favor of strain: '' |
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| GRMZM2G124365 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.0 x 10-7 | 204 | 24 | 119 | 52 | 89.47% | 30.41% | 228 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.22e-33' χ2 p-value for Mo17 x B73: '3.00e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G124365 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 879 | 67 | 376 | 251 | 92.92% | 40.03% | 946 | 627 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124353 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.47 x 10-5 | 5626 | 3629 | 2707 | 5927 | 60.79% | 68.65% | 9255 | 8634 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.73e-33' χ2 p-value for Mo17 x B73: '.0000947' Biased in favor of strain: 'Mo17' |
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| GRMZM2G124353 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3058 | 867 | 2625 | 1182 | 77.91% | 31.05% | 3925 | 3807 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124335 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4175 | 2366 | 3768 | 2070 | 63.83% | 35.46% | 6541 | 5838 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124335 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.07 x 10-10 | 347 | 75 | 186 | 194 | 82.23% | 51.05% | 422 | 380 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-11' χ2 p-value for Mo17 x B73: '1.07e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G124321 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.026725 x 10-1 | 232 | 111 | 61 | 106 | 67.64% | 63.47% | 343 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7026725' χ2 p-value for Mo17 x B73: '.3813119' Biased in favor of strain: '' |
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| GRMZM2G124321 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.19 x 10-6 | 135 | 57 | 115 | 55 | 70.31% | 32.35% | 192 | 170 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.81e-08' χ2 p-value for Mo17 x B73: '4.19e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G124317 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 2 | 0 | 66.67% | 0.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G124317 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 1 | 100.00% | 33.33% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G124301 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.578 x 10-3 | 18 | 0 | 8 | 3 | 100.00% | 27.27% | 18 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026999' χ2 p-value for Mo17 x B73: '.005578' Biased in favor of strain: 'B73' |
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| GRMZM2G124301 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 2 | 7 | 1 | 83.33% | 12.50% | 12 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0209213' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
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| GRMZM2G124288 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.057 x 10-4 | 346 | 255 | 322 | 203 | 57.57% | 38.67% | 601 | 525 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002057' χ2 p-value for Mo17 x B73: '2.06e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G124288 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.762 x 10-4 | 373 | 134 | 211 | 251 | 73.57% | 54.33% | 507 | 462 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009762' χ2 p-value for Mo17 x B73: '1.85e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G124276 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124276 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 8 | 5 | 2 | 20.00% | 28.57% | 10 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| GRMZM2G124254 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.62 x 10-19 | 605 | 333 | 580 | 265 | 64.50% | 31.36% | 938 | 845 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.62e-19' χ2 p-value for Mo17 x B73: '2.32e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G124254 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.33397 x 10-2 | 596 | 450 | 391 | 872 | 56.98% | 69.04% | 1046 | 1263 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.00e-11' χ2 p-value for Mo17 x B73: '.0733397' Biased in favor of strain: '' |
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| GRMZM2G124239 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630244 x 10-1 | 17 | 4 | 8 | 14 | 80.95% | 63.64% | 21 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.16492' χ2 p-value for Mo17 x B73: '.7630244' Biased in favor of strain: '' |
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| GRMZM2G124239 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.927384 x 10-1 | 28 | 27 | 17 | 21 | 50.91% | 55.26% | 55 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8927384' χ2 p-value for Mo17 x B73: '.5164123' Biased in favor of strain: '' |
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| GRMZM2G124209 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.05 x 10-8 | 184 | 91 | 157 | 67 | 66.91% | 29.91% | 275 | 224 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.05e-08' χ2 p-value for Mo17 x B73: '1.82e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G124209 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.18208 x 10-2 | 133 | 48 | 166 | 49 | 73.48% | 22.79% | 181 | 215 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0518208' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G124207 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 57721 | 4469 | 23254 | 6054 | 92.81% | 20.66% | 62190 | 29308 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124207 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2234 | 164 | 1109 | 198 | 93.16% | 15.15% | 2398 | 1307 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G124203 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.698154 x 10-1 | 19 | 7 | 10 | 12 | 73.08% | 54.55% | 26 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0186029' χ2 p-value for Mo17 x B73: '.6698154' Biased in favor of strain: '' |
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| GRMZM2G124203 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.635445 x 10-1 | 5 | 5 | 6 | 5 | 50.00% | 45.45% | 10 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2635445' χ2 p-value for Mo17 x B73: '.135593' Biased in favor of strain: '' |
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| GRMZM2G124179 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 2 | 9 | 100.00% | 81.82% | 8 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.2864221' Biased in favor of strain: '' |
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| GRMZM2G124179 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.99 x 10-8 | 112 | 43 | 171 | 46 | 72.26% | 21.20% | 155 | 217 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.99e-08' χ2 p-value for Mo17 x B73: '2.15e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G124175 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482131 x 10-1 | 3 | 8 | 8 | 4 | 27.27% | 33.33% | 11 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM2G124175 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 3 | 6 | 71.43% | 66.67% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.789277' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G124151 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.963759 x 10-1 | 78 | 40 | 59 | 111 | 66.10% | 65.29% | 118 | 170 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8963759' χ2 p-value for Mo17 x B73: '.7042208' Biased in favor of strain: '' |
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| GRMZM2G124151 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.127 x 10-4 | 291 | 205 | 317 | 185 | 58.67% | 36.85% | 496 | 502 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001127' χ2 p-value for Mo17 x B73: '3.83e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G124143 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33083 x 10-2 | 59 | 35 | 63 | 37 | 62.77% | 37.00% | 94 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133083' χ2 p-value for Mo17 x B73: '.0093224' Biased in favor of strain: 'B73' |
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| GRMZM2G124143 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.0683 x 10-3 | 85 | 22 | 63 | 78 | 79.44% | 55.32% | 107 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0050683' χ2 p-value for Mo17 x B73: '.0042584' Biased in favor of strain: 'B73' |
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| GRMZM2G124136 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 3 | 4 | 100.00% | 57.14% | 8 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: '' |
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| GRMZM2G124136 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.160316 x 10-1 | 533 | 459 | 552 | 501 | 53.73% | 47.58% | 992 | 1053 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0187985' χ2 p-value for Mo17 x B73: '.1160316' Biased in favor of strain: '' |
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| GRMZM2G124096 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.546073 x 10-1 | 907 | 868 | 680 | 728 | 51.10% | 51.70% | 1775 | 1408 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3546073' χ2 p-value for Mo17 x B73: '.2008251' Biased in favor of strain: '' |
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| GRMZM2G124096 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.970474 x 10-1 | 1084 | 440 | 562 | 1139 | 71.13% | 66.96% | 1524 | 1701 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.00022' χ2 p-value for Mo17 x B73: '.7970474' Biased in favor of strain: '' |
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| GRMZM2G124091 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.09 x 10-23 | 44 | 164 | 33 | 331 | 21.15% | 90.93% | 208 | 364 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.09e-23' Biased in favor of strain: 'Mo17' |
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| GRMZM2G124091 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.364 x 10-4 | 370 | 477 | 265 | 399 | 43.68% | 60.09% | 847 | 664 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002364' χ2 p-value for Mo17 x B73: '1.99e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G124079 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.371418 x 10-1 | 266 | 196 | 220 | 204 | 57.58% | 48.11% | 462 | 424 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011272' χ2 p-value for Mo17 x B73: '.4371418' Biased in favor of strain: '' |
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| GRMZM2G124079 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.396508 x 10-1 | 347 | 166 | 193 | 336 | 67.64% | 63.52% | 513 | 529 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6396508' χ2 p-value for Mo17 x B73: '.1242468' Biased in favor of strain: '' |
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| GRMZM2G124070 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.335071 x 10-1 | 134 | 100 | 58 | 135 | 57.26% | 69.95% | 234 | 193 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0022813' χ2 p-value for Mo17 x B73: '.3335071' Biased in favor of strain: '' |
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| GRMZM2G124070 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.646116 x 10-1 | 76 | 93 | 64 | 69 | 44.97% | 51.88% | 169 | 133 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1909777' χ2 p-value for Mo17 x B73: '.6646116' Biased in favor of strain: '' |