| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G125308 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3534 | 830 | 1133 | 1348 | 80.98% | 54.33% | 4364 | 2481 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '8.04e-39' Biased in favor of strain: 'B73' |
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| GRMZM2G125308 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 925 | 264 | 691 | 315 | 77.80% | 31.31% | 1189 | 1006 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.04e-32' Biased in favor of strain: 'B73' |
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| GRMZM2G125304 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.0 x 10-30 | 238 | 9 | 162 | 12 | 96.36% | 6.90% | 247 | 174 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.80e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G125304 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48 x 10-10 | 149 | 14 | 71 | 46 | 91.41% | 39.32% | 163 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.06e-11' χ2 p-value for Mo17 x B73: '3.48e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G125300 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5385 | 809 | 2574 | 1532 | 86.94% | 37.31% | 6194 | 4106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125300 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3831 | 1117 | 3117 | 910 | 77.43% | 22.60% | 4948 | 4027 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125294 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G125294 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G125271 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5827 | 1650 | 3385 | 3258 | 77.93% | 49.04% | 7477 | 6643 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125271 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5351 | 2266 | 4674 | 2273 | 70.25% | 32.72% | 7617 | 6947 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125266 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.863 x 10-4 | 273 | 138 | 239 | 166 | 66.42% | 40.99% | 411 | 405 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.76e-11' χ2 p-value for Mo17 x B73: '.0002863' Biased in favor of strain: 'B73' |
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| GRMZM2G125266 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.373911 x 10-1 | 143 | 75 | 93 | 199 | 65.60% | 68.15% | 218 | 292 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7373911' χ2 p-value for Mo17 x B73: '.5906164' Biased in favor of strain: '' |
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| GRMZM2G125263 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 0 | 0.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G125263 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.220527 x 10-1 | 19 | 30 | 33 | 28 | 38.78% | 45.90% | 49 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1160831' χ2 p-value for Mo17 x B73: '.5220527' Biased in favor of strain: '' |
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| GRMZM2G125259 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.16 x 10-6 | 63 | 14 | 66 | 23 | 81.82% | 25.84% | 77 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.35e-08' χ2 p-value for Mo17 x B73: '5.16e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G125259 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 22 | 0 | 100.00% | 0.00% | 9 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: '' |
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| GRMZM2G125243 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.91214 x 10-2 | 56 | 15 | 33 | 28 | 78.87% | 45.90% | 71 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0291214' χ2 p-value for Mo17 x B73: '.0005809' Biased in favor of strain: '' |
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| GRMZM2G125243 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.642141 x 10-1 | 174 | 149 | 175 | 147 | 53.87% | 45.65% | 323 | 322 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1642141' χ2 p-value for Mo17 x B73: '.1186703' Biased in favor of strain: '' |
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| GRMZM2G125241 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.9824 x 10-3 | 183 | 126 | 101 | 150 | 59.22% | 59.76% | 309 | 251 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011844' χ2 p-value for Mo17 x B73: '.0019824' Biased in favor of strain: '' |
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| GRMZM2G125241 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.76 x 10-17 | 887 | 226 | 376 | 419 | 79.69% | 52.70% | 1113 | 795 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.98e-20' χ2 p-value for Mo17 x B73: '6.76e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G125239 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 5.6797 x 10-3 | 118 | 87 | 150 | 165 | 57.56% | 52.38% | 205 | 315 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0056797' χ2 p-value for Mo17 x B73: '7.51e-08' Biased in favor of strain: '' |
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| GRMZM2G125239 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.935403 x 10-1 | 97 | 74 | 78 | 83 | 56.73% | 51.55% | 171 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0786023' χ2 p-value for Mo17 x B73: '.6935403' Biased in favor of strain: '' |
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| GRMZM2G125233 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1080 | 68 | 1500 | 77 | 94.08% | 4.88% | 1148 | 1577 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125233 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 4 | 2 | 33.33% | 33.33% | 3 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G125216 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 3 | 0 | 0.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G125216 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 1 | 100.00% | 100.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G125193 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.9 x 10-17 | 376 | 648 | 285 | 599 | 36.72% | 67.76% | 1024 | 884 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.90e-17' χ2 p-value for Mo17 x B73: '4.52e-26' Biased in favor of strain: 'Mo17' |
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| GRMZM2G125193 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.39 x 10-10 | 421 | 329 | 210 | 770 | 56.13% | 78.57% | 750 | 980 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.39e-10' χ2 p-value for Mo17 x B73: '2.66e-15' Biased in favor of strain: 'Mo17' |
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| GRMZM2G125175 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.864761 x 10-1 | 9 | 12 | 10 | 14 | 42.86% | 58.33% | 21 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0206359' χ2 p-value for Mo17 x B73: '.3864761' Biased in favor of strain: '' |
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| GRMZM2G125175 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 7 | 7 | 4 | 8 | 50.00% | 66.67% | 14 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM2G125149 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2806 | 973 | 2027 | 878 | 74.25% | 30.22% | 3779 | 2905 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125149 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4008 | 215 | 2362 | 674 | 94.91% | 22.20% | 4223 | 3036 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125148 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 1 | 100.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G125148 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 5 | 0 | 2 | 16.67% | 100.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G125140 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.046568 x 10-1 | 77 | 67 | 75 | 58 | 53.47% | 43.61% | 144 | 133 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4046568' χ2 p-value for Mo17 x B73: '.1404582' Biased in favor of strain: '' |
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| GRMZM2G125140 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.015084 x 10-1 | 31 | 11 | 20 | 46 | 73.81% | 69.70% | 42 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.326123' χ2 p-value for Mo17 x B73: '.6015084' Biased in favor of strain: '' |
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| GRMZM2G125138 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.1437 x 10-3 | 53 | 11 | 42 | 22 | 82.81% | 34.38% | 64 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0061437' χ2 p-value for Mo17 x B73: '4.25e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G125138 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.05 x 10-7 | 106 | 37 | 94 | 35 | 74.13% | 27.13% | 143 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.92e-09' χ2 p-value for Mo17 x B73: '2.05e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G125095 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 0 | 1 | 37.50% | 100.00% | 8 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G125095 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G125083 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.635144 x 10-1 | 191 | 113 | 64 | 111 | 62.83% | 63.43% | 304 | 175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1557461' χ2 p-value for Mo17 x B73: '.3635144' Biased in favor of strain: '' |
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| GRMZM2G125083 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.094667 x 10-1 | 173 | 180 | 169 | 197 | 49.01% | 53.83% | 353 | 366 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7094667' χ2 p-value for Mo17 x B73: '.1433078' Biased in favor of strain: '' |
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| GRMZM2G125081 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 714 | 52 | 648 | 68 | 93.21% | 9.50% | 766 | 716 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125081 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 551 | 4 | 268 | 8 | 99.28% | 2.90% | 555 | 276 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125072 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 1 | 0 | 6 | 92.31% | 100.00% | 13 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0498614' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G125072 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937686 x 10-1 | 31 | 5 | 13 | 9 | 86.11% | 40.91% | 36 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000147' χ2 p-value for Mo17 x B73: '.3937686' Biased in favor of strain: '' |
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| GRMZM2G125054 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.819262 x 10-1 | 269 | 186 | 234 | 206 | 59.12% | 46.82% | 455 | 440 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000998' χ2 p-value for Mo17 x B73: '.1819262' Biased in favor of strain: '' |
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| GRMZM2G125054 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.56 x 10-13 | 509 | 408 | 285 | 926 | 55.51% | 76.47% | 917 | 1211 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.56e-13' χ2 p-value for Mo17 x B73: '4.70e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM2G125037 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G125037 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.41499 x 10-2 | 33 | 20 | 53 | 28 | 62.26% | 34.57% | 53 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0741499' χ2 p-value for Mo17 x B73: '.0054732' Biased in favor of strain: '' |
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| GRMZM2G125023 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 0 | 0 | 62.50% | 8 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G125023 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 5 | 2 | 19 | 44.44% | 90.48% | 9 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572937' χ2 p-value for Mo17 x B73: '.0206376' Biased in favor of strain: '' |
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| GRMZM2G125020 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 945 | 74 | 533 | 68 | 92.74% | 11.31% | 1019 | 601 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125020 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2432 | 966 | 3046 | 1136 | 71.57% | 27.16% | 3398 | 4182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G125004 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.6539 x 10-3 | 55 | 31 | 82 | 23 | 63.95% | 21.90% | 86 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0096539' χ2 p-value for Mo17 x B73: '8.52e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G125004 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 6 | 6 | 100.00% | 50.00% | 9 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM2G125001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.9 x 10-11 | 6 | 34 | 1 | 89 | 15.00% | 98.89% | 40 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.15e-12' χ2 p-value for Mo17 x B73: '8.90e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G125001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.059032 x 10-1 | 2 | 8 | 3 | 7 | 20.00% | 70.00% | 10 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G124975 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.527398 x 10-1 | 787 | 664 | 739 | 762 | 54.24% | 50.77% | 1451 | 1501 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0012421' χ2 p-value for Mo17 x B73: '.5527398' Biased in favor of strain: '' |
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| GRMZM2G124975 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.39 x 10-13 | 827 | 245 | 429 | 534 | 77.15% | 55.45% | 1072 | 963 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.39e-13' χ2 p-value for Mo17 x B73: '1.55e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G124974 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124974 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 7 | 2 | 50.00% | 22.22% | 2 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: '' |
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| GRMZM2G124972 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124972 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 1 | 3 | 4 | 90.00% | 57.14% | 10 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1175272' χ2 p-value for Mo17 x B73: '.59298' Biased in favor of strain: '' |
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| GRMZM2G124965 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 4.6962 x 10-3 | 468 | 289 | 354 | 481 | 61.82% | 57.60% | 757 | 835 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046962' χ2 p-value for Mo17 x B73: '2.78e-08' Biased in favor of strain: '' |
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| GRMZM2G124965 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.79918 x 10-2 | 346 | 238 | 306 | 254 | 59.25% | 45.36% | 584 | 560 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.86e-06' χ2 p-value for Mo17 x B73: '.0279918' Biased in favor of strain: 'B73' |
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| GRMZM2G124963 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.04 x 10-7 | 149 | 70 | 155 | 77 | 68.04% | 33.19% | 219 | 232 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.38e-08' χ2 p-value for Mo17 x B73: '3.04e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G124963 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 10 | 1 | 0 | 23.08% | 0.00% | 13 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008561' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G124918 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.553466 x 10-1 | 97 | 22 | 28 | 64 | 81.51% | 69.57% | 119 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005916' χ2 p-value for Mo17 x B73: '.5553466' Biased in favor of strain: '' |
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| GRMZM2G124918 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38578 x 10-1 | 12 | 2 | 6 | 9 | 85.71% | 60.00% | 14 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0075263' χ2 p-value for Mo17 x B73: '.438578' Biased in favor of strain: '' |
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| GRMZM2G124915 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.404188 x 10-1 | 83 | 91 | 90 | 89 | 47.70% | 49.72% | 174 | 179 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5441971' χ2 p-value for Mo17 x B73: '.9404188' Biased in favor of strain: '' |
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| GRMZM2G124915 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.541384 x 10-1 | 49 | 21 | 33 | 55 | 70.00% | 62.50% | 70 | 88 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5541384' χ2 p-value for Mo17 x B73: '.4070157' Biased in favor of strain: '' |
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| GRMZM2G124911 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 6 | 0 | 100.00% | 0.00% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G124911 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 2 | 0 | 100.00% | 0.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G124886 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.06 x 10-6 | 694 | 416 | 483 | 350 | 62.52% | 42.02% | 1110 | 833 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.17e-17' χ2 p-value for Mo17 x B73: '4.06e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G124886 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.094 x 10-4 | 854 | 342 | 517 | 842 | 71.40% | 61.96% | 1196 | 1359 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005094' χ2 p-value for Mo17 x B73: '.0002307' Biased in favor of strain: 'B73' |
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| GRMZM2G124872 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.663175 x 10-1 | 167 | 90 | 71 | 165 | 64.98% | 69.92% | 257 | 236 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5663175' χ2 p-value for Mo17 x B73: '.2897546' Biased in favor of strain: '' |
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| GRMZM2G124872 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.980247 x 10-1 | 28 | 13 | 15 | 20 | 68.29% | 57.14% | 41 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0191496' χ2 p-value for Mo17 x B73: '.3980247' Biased in favor of strain: '' |
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| GRMZM2G124863 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 721 | 294 | 904 | 446 | 71.03% | 33.04% | 1015 | 1350 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.16e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G124863 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.073 x 10-4 | 4243 | 1931 | 2296 | 3935 | 68.72% | 63.15% | 6174 | 6231 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006073' χ2 p-value for Mo17 x B73: '3.97e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G124815 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 3 | 1 | 14 | 62.50% | 93.33% | 8 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.0284597' Biased in favor of strain: '' |
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| GRMZM2G124815 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.18 x 10-5 | 49 | 17 | 45 | 9 | 74.24% | 16.67% | 66 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000818' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G124805 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 5 | 2 | 50.00% | 28.57% | 2 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| GRMZM2G124805 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 5 | 0 | 100.00% | 0.00% | 6 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G124791 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.19 x 10-10 | 4720 | 1987 | 3176 | 5418 | 70.37% | 63.04% | 6707 | 8594 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-10' χ2 p-value for Mo17 x B73: '1.05e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G124791 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.865675 x 10-1 | 3914 | 3264 | 3018 | 2997 | 54.53% | 49.83% | 7178 | 6015 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.69e-14' χ2 p-value for Mo17 x B73: '.7865675' Biased in favor of strain: '' |
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| GRMZM2G124758 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4587 x 10-2 | 211 | 127 | 284 | 240 | 62.43% | 45.80% | 338 | 524 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.90e-06' χ2 p-value for Mo17 x B73: '.054587' Biased in favor of strain: '' |
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| GRMZM2G124758 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.878757 x 10-1 | 330 | 134 | 150 | 292 | 71.12% | 66.06% | 464 | 442 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0418353' χ2 p-value for Mo17 x B73: '.7878757' Biased in favor of strain: '' |
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| GRMZM2G124755 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 11 | 0 | 8 | 26.67% | 100.00% | 15 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0010149' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G124755 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.572992 x 10-1 | 6 | 12 | 2 | 15 | 33.33% | 88.24% | 18 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0016162' Biased in favor of strain: '' |
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| GRMZM2G124744 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.0 x 10-19 | 108 | 11 | 160 | 16 | 90.76% | 9.09% | 119 | 176 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.00e-19' χ2 p-value for Mo17 x B73: '1.90e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G124744 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124718 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124718 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 2 | 1 | 75.00% | 33.33% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G124708 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G124708 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 0 | 2 | 100.00% | 100.00% | 8 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G124701 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.63925 x 10-2 | 74 | 20 | 34 | 39 | 78.72% | 53.42% | 94 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0131505' χ2 p-value for Mo17 x B73: '.0163925' Biased in favor of strain: '' |
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| GRMZM2G124701 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518296 x 10-1 | 22 | 18 | 19 | 21 | 55.00% | 52.50% | 40 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: '' |
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| GRMZM2G124638 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.833372 x 10-1 | 259 | 284 | 175 | 221 | 47.70% | 55.81% | 543 | 396 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2833372' χ2 p-value for Mo17 x B73: '.0208005' Biased in favor of strain: '' |
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| GRMZM2G124638 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8379 x 10-3 | 80 | 19 | 41 | 35 | 80.81% | 46.05% | 99 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0028379' χ2 p-value for Mo17 x B73: '.0001377' Biased in favor of strain: 'B73' |