| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G126749 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 1 | 0 | 5 | 93.33% | 100.00% | 15 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007891' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G126749 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G126706 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 453 | 20 | 178 | 66 | 95.77% | 27.05% | 473 | 244 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G126706 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 407 | 17 | 359 | 20 | 95.99% | 5.28% | 424 | 379 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G126682 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.13 x 10-13 | 1621 | 1239 | 1426 | 996 | 56.68% | 41.12% | 2860 | 2422 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.13e-13' χ2 p-value for Mo17 x B73: '2.39e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G126682 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9397 x 10-3 | 423 | 365 | 289 | 711 | 53.68% | 71.10% | 788 | 1000 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.05e-14' χ2 p-value for Mo17 x B73: '.0029397' Biased in favor of strain: 'Mo17' |
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| GRMZM2G126664 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.373516 x 10-1 | 58 | 21 | 29 | 52 | 73.42% | 64.20% | 79 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2030699' χ2 p-value for Mo17 x B73: '.6373516' Biased in favor of strain: '' |
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| GRMZM2G126664 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.434326 x 10-1 | 69 | 48 | 76 | 59 | 58.97% | 43.70% | 117 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522036' χ2 p-value for Mo17 x B73: '.1434326' Biased in favor of strain: '' |
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| GRMZM2G126656 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.526837 x 10-1 | 14 | 15 | 7 | 3 | 48.28% | 30.00% | 29 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8526837' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G126656 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 1 | 0 | 83.33% | 0.00% | 6 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G126603 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2403 | 104 | 1534 | 307 | 95.85% | 16.68% | 2507 | 1841 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G126603 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2031 | 148 | 1524 | 92 | 93.21% | 5.69% | 2179 | 1616 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G126601 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.64 x 10-18 | 159 | 38 | 200 | 53 | 80.71% | 20.95% | 197 | 253 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.64e-18' χ2 p-value for Mo17 x B73: '2.42e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G126601 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.501066 x 10-1 | 14 | 3 | 5 | 9 | 82.35% | 64.29% | 17 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1700716' χ2 p-value for Mo17 x B73: '.8501066' Biased in favor of strain: '' |
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| GRMZM2G126594 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.875 x 10-4 | 48 | 1 | 35 | 31 | 97.96% | 46.97% | 49 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.37e-06' χ2 p-value for Mo17 x B73: '.0006875' Biased in favor of strain: 'B73' |
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| GRMZM2G126594 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.059032 x 10-1 | 51 | 39 | 63 | 15 | 56.67% | 19.23% | 90 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '5.48e-08' Biased in favor of strain: '' |
||||
| GRMZM2G126582 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 8 | 2 | 2 | 46.67% | 50.00% | 15 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G126582 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 6 | 4 | 0 | 14.29% | 0.00% | 7 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0032832' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G126552 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.79321 x 10-2 | 1438 | 648 | 834 | 1054 | 68.94% | 55.83% | 2086 | 1888 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0279321' χ2 p-value for Mo17 x B73: '1.65e-23' Biased in favor of strain: '' |
||||
| GRMZM2G126552 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.76 x 10-25 | 2974 | 1880 | 2811 | 2086 | 61.27% | 42.60% | 4854 | 4897 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.76e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G126545 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.78892 x 10-2 | 41 | 4 | 20 | 10 | 91.11% | 33.33% | 45 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.48e-08' χ2 p-value for Mo17 x B73: '.0678892' Biased in favor of strain: '' |
||||
| GRMZM2G126545 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.939373 x 10-1 | 19 | 5 | 14 | 11 | 79.17% | 44.00% | 24 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1939373' χ2 p-value for Mo17 x B73: '.0162095' Biased in favor of strain: '' |
||||
| GRMZM2G126517 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.2 x 10-15 | 711 | 189 | 353 | 301 | 79.00% | 46.02% | 900 | 654 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.20e-15' χ2 p-value for Mo17 x B73: '4.16e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G126517 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.7 x 10-8 | 447 | 205 | 350 | 222 | 68.56% | 38.81% | 652 | 572 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.61e-21' χ2 p-value for Mo17 x B73: '8.70e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G126507 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0456 | 423 | 314 | 435 | 378 | 57.39% | 46.49% | 737 | 813 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000594' χ2 p-value for Mo17 x B73: '.0456' Biased in favor of strain: 'B73' |
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| GRMZM2G126507 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.5128 x 10-3 | 680 | 274 | 375 | 451 | 71.28% | 54.60% | 954 | 826 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0025128' χ2 p-value for Mo17 x B73: '1.89e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G126484 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.571 x 10-4 | 43 | 5 | 32 | 23 | 89.58% | 41.82% | 48 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007571' χ2 p-value for Mo17 x B73: '.0000926' Biased in favor of strain: 'B73' |
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| GRMZM2G126484 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9849 x 10-3 | 123 | 181 | 97 | 143 | 40.46% | 59.58% | 304 | 240 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008794' χ2 p-value for Mo17 x B73: '.0029849' Biased in favor of strain: 'Mo17' |
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| GRMZM2G126471 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.095609 x 10-1 | 194 | 178 | 156 | 154 | 52.15% | 49.68% | 372 | 310 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4067868' χ2 p-value for Mo17 x B73: '.9095609' Biased in favor of strain: '' |
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| GRMZM2G126471 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.067968 x 10-1 | 251 | 137 | 128 | 242 | 64.69% | 65.41% | 388 | 370 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4089471' χ2 p-value for Mo17 x B73: '.6067968' Biased in favor of strain: '' |
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| GRMZM2G126468 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.127016 x 10-1 | 20 | 14 | 21 | 38 | 58.82% | 64.41% | 34 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3319601' χ2 p-value for Mo17 x B73: '.7127016' Biased in favor of strain: '' |
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| GRMZM2G126468 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.857506 x 10-1 | 28 | 17 | 18 | 25 | 62.22% | 58.14% | 45 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1010503' χ2 p-value for Mo17 x B73: '.2857506' Biased in favor of strain: '' |
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| GRMZM2G126453 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.752335 x 10-1 | 21 | 8 | 13 | 8 | 72.41% | 38.10% | 29 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0157768' χ2 p-value for Mo17 x B73: '.2752335' Biased in favor of strain: '' |
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| GRMZM2G126453 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.110912 x 10-1 | 24 | 11 | 25 | 12 | 68.57% | 32.43% | 35 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8110912' χ2 p-value for Mo17 x B73: '9.99e-06' Biased in favor of strain: '' |
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| GRMZM2G126413 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 4 | 5 | 3 | 75.00% | 37.50% | 16 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G126413 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 3 | 1 | 25.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G126408 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.18606 x 10-2 | 17 | 8 | 12 | 2 | 68.00% | 14.29% | 25 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0718606' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: '' |
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| GRMZM2G126408 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.99984 x 10-1 | 8 | 4 | 7 | 11 | 66.67% | 61.11% | 12 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999984' χ2 p-value for Mo17 x B73: '.6170749' Biased in favor of strain: '' |
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| GRMZM2G126397 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 98 | 5 | 1 | 0 | 95.15% | 0.00% | 103 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.72e-10' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G126397 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 9464 | 1856 | 8710 | 1352 | 83.60% | 13.44% | 11320 | 10062 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G126371 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 2 | 5 | 100.00% | 71.43% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| GRMZM2G126371 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 1 | 2 | 83.33% | 66.67% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G126361 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.23376 x 10-2 | 80 | 56 | 23 | 25 | 58.82% | 52.08% | 136 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0523376' χ2 p-value for Mo17 x B73: '.0320887' Biased in favor of strain: '' |
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| GRMZM2G126361 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.36377 x 10-2 | 152 | 101 | 131 | 94 | 60.08% | 41.78% | 253 | 225 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013443' χ2 p-value for Mo17 x B73: '.0136377' Biased in favor of strain: 'B73' |
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| GRMZM2G126338 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.210704 x 10-1 | 126 | 76 | 105 | 88 | 62.38% | 45.60% | 202 | 193 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004348' χ2 p-value for Mo17 x B73: '.2210704' Biased in favor of strain: '' |
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| GRMZM2G126338 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.38 x 10-6 | 281 | 76 | 161 | 135 | 78.71% | 45.61% | 357 | 296 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.38e-06' χ2 p-value for Mo17 x B73: '1.52e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G126292 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 0 | 2 | 50.00% | 100.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G126292 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 9 | 100.00% | 100.00% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G126290 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.70502 x 10-1 | 46 | 55 | 37 | 29 | 45.54% | 43.94% | 101 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.370502' χ2 p-value for Mo17 x B73: '.3247558' Biased in favor of strain: '' |
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| GRMZM2G126290 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.697914 x 10-1 | 28 | 16 | 11 | 43 | 63.64% | 79.63% | 44 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6697914' χ2 p-value for Mo17 x B73: '.0433082' Biased in favor of strain: '' |
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| GRMZM2G126260 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 0 | 1 | 75.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G126260 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.03 x 10-8 | 208 | 112 | 323 | 156 | 65.00% | 32.57% | 320 | 479 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.03e-08' χ2 p-value for Mo17 x B73: '2.34e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G126253 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 1 | 0 | 33.33% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G126253 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 2 | 100.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G126239 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
|||||
| GRMZM2G126239 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.26323 x 10-2 | 29 | 16 | 33 | 16 | 64.44% | 32.65% | 45 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0526323' χ2 p-value for Mo17 x B73: '.0151584' Biased in favor of strain: '' |
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| GRMZM2G126218 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.454475 x 10-1 | 41 | 50 | 24 | 39 | 45.05% | 61.90% | 91 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3454475' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G126218 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.319852 x 10-1 | 20 | 15 | 13 | 48 | 57.14% | 78.69% | 35 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2319852' χ2 p-value for Mo17 x B73: '.0463945' Biased in favor of strain: '' |
||||
| GRMZM2G126199 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.713323 x 10-1 | 73 | 49 | 13 | 37 | 59.84% | 74.00% | 122 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1094836' χ2 p-value for Mo17 x B73: '.2713323' Biased in favor of strain: '' |
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| GRMZM2G126199 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.36 x 10-17 | 565 | 250 | 530 | 291 | 69.33% | 35.44% | 815 | 821 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.62e-28' χ2 p-value for Mo17 x B73: '7.36e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G126194 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 542 | 154 | 560 | 205 | 77.87% | 26.80% | 696 | 765 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.04e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G126194 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.403009 x 10-1 | 9 | 3 | 14 | 11 | 75.00% | 44.00% | 12 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5403009' χ2 p-value for Mo17 x B73: '.0162095' Biased in favor of strain: '' |
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| GRMZM2G126190 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 8 | 2 | 5 | 11.11% | 71.43% | 9 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004069' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: '' |
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| GRMZM2G126190 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48085 x 10-2 | 3 | 12 | 2 | 9 | 20.00% | 81.82% | 15 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0201368' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: 'Mo17' |
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| GRMZM2G126175 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.075 x 10-4 | 0 | 16 | 0 | 15 | 0.00% | 100.00% | 16 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: 'Mo17' |
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| GRMZM2G126175 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.075 x 10-4 | 0 | 12 | 0 | 30 | 0.00% | 100.00% | 12 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.0001075' Biased in favor of strain: 'Mo17' |
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| GRMZM2G126170 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.482757 x 10-1 | 79 | 40 | 44 | 83 | 66.39% | 65.35% | 119 | 127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9482757' χ2 p-value for Mo17 x B73: '.7537273' Biased in favor of strain: '' |
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| GRMZM2G126170 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.779754 x 10-1 | 115 | 84 | 75 | 70 | 57.79% | 48.28% | 199 | 145 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0279825' χ2 p-value for Mo17 x B73: '.6779754' Biased in favor of strain: '' |
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| GRMZM2G126148 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.92849 x 10-1 | 28 | 30 | 19 | 24 | 48.28% | 55.81% | 58 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.792849' χ2 p-value for Mo17 x B73: '.4457659' Biased in favor of strain: '' |
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| GRMZM2G126148 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.35314 x 10-2 | 107 | 86 | 53 | 140 | 55.44% | 72.54% | 193 | 193 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000938' χ2 p-value for Mo17 x B73: '.0835314' Biased in favor of strain: '' |
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| GRMZM2G126128 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.698103 x 10-1 | 57 | 13 | 46 | 71 | 81.43% | 60.68% | 70 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0087943' χ2 p-value for Mo17 x B73: '.1698103' Biased in favor of strain: '' |
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| GRMZM2G126128 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.672694 x 10-1 | 94 | 64 | 58 | 52 | 59.49% | 47.27% | 158 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0170017' χ2 p-value for Mo17 x B73: '.5672694' Biased in favor of strain: '' |
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| GRMZM2G126120 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1554 | 850 | 1493 | 665 | 64.64% | 30.82% | 2404 | 2158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G126120 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.309 x 10-4 | 1735 | 738 | 1111 | 1371 | 70.16% | 55.24% | 2473 | 2482 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002309' χ2 p-value for Mo17 x B73: '1.37e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G126083 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.44055 x 10-2 | 74 | 23 | 59 | 33 | 76.29% | 35.87% | 97 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0444055' χ2 p-value for Mo17 x B73: '3.70e-10' Biased in favor of strain: '' |
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| GRMZM2G126083 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 1 | 2 | 2 | 87.50% | 50.00% | 8 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G126079 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.6539 x 10-3 | 12 | 73 | 31 | 55 | 14.12% | 63.95% | 85 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.68e-11' χ2 p-value for Mo17 x B73: '.0096539' Biased in favor of strain: 'Mo17' |
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| GRMZM2G126079 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.653733 x 10-1 | 4 | 9 | 31 | 48 | 30.77% | 60.76% | 13 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0060391' χ2 p-value for Mo17 x B73: '.2653733' Biased in favor of strain: '' |
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| GRMZM2G126062 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 1 | 3 | 1 | 93.33% | 25.00% | 15 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0284605' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: '' |
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| GRMZM2G126062 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.46707 x 10-2 | 37 | 12 | 19 | 10 | 75.51% | 34.48% | 49 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000355' χ2 p-value for Mo17 x B73: '.0946707' Biased in favor of strain: '' |
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| GRMZM2G126055 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.57518 x 10-1 | 44 | 34 | 160 | 290 | 56.41% | 64.44% | 78 | 450 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.257518' χ2 p-value for Mo17 x B73: '8.88e-10' Biased in favor of strain: '' |
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| GRMZM2G126055 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929528 x 10-1 | 40 | 23 | 147 | 272 | 63.49% | 64.92% | 63 | 419 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929528' χ2 p-value for Mo17 x B73: '.4472675' Biased in favor of strain: '' |
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| GRMZM2G126038 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.411014 x 10-1 | 1764 | 829 | 1176 | 1732 | 68.03% | 59.56% | 2593 | 2908 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1411014' χ2 p-value for Mo17 x B73: '4.30e-16' Biased in favor of strain: '' |
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| GRMZM2G126038 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1947 | 954 | 1865 | 800 | 67.11% | 30.02% | 2901 | 2665 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G126026 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.74 x 10-12 | 68 | 8 | 70 | 9 | 89.47% | 11.39% | 76 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.88e-12' χ2 p-value for Mo17 x B73: '6.74e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G126026 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.114968 x 10-1 | 21 | 8 | 12 | 10 | 72.41% | 45.45% | 29 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5114968' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM2G126019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.675 x 10-4 | 98 | 85 | 80 | 79 | 53.55% | 49.69% | 183 | 159 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001675' χ2 p-value for Mo17 x B73: '5.57e-06' Biased in favor of strain: '' |
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| GRMZM2G126019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.41 x 10-5 | 416 | 292 | 401 | 290 | 58.76% | 41.97% | 708 | 691 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.16e-06' χ2 p-value for Mo17 x B73: '.0000241' Biased in favor of strain: 'B73' |
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| GRMZM2G126018 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.38578 x 10-1 | 4 | 9 | 6 | 9 | 30.77% | 60.00% | 13 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.438578' Biased in favor of strain: '' |
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| GRMZM2G126018 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.95 x 10-5 | 0 | 29 | 4 | 54 | 0.00% | 93.10% | 29 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.62e-14' χ2 p-value for Mo17 x B73: '.0000195' Biased in favor of strain: 'Mo17' |
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| GRMZM2G126010 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.792683 x 10-1 | 1916 | 903 | 797 | 1670 | 67.97% | 67.69% | 2819 | 2467 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1429951' χ2 p-value for Mo17 x B73: '.2792683' Biased in favor of strain: '' |
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| GRMZM2G126010 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.841 x 10-4 | 857 | 709 | 953 | 1136 | 54.73% | 54.38% | 1566 | 2089 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001841' χ2 p-value for Mo17 x B73: '.0000623' Biased in favor of strain: '' |
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| GRMZM2G126002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.78813 x 10-2 | 1561 | 1101 | 1668 | 1534 | 58.64% | 47.91% | 2662 | 3202 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.85e-19' χ2 p-value for Mo17 x B73: '.0178813' Biased in favor of strain: 'B73' |
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| GRMZM2G126002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.101 x 10-4 | 1401 | 879 | 824 | 1901 | 61.45% | 69.76% | 2280 | 2725 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.24e-07' χ2 p-value for Mo17 x B73: '.0006101' Biased in favor of strain: 'Mo17' |
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| GRMZM2G125985 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G125985 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.850494 x 10-1 | 9 | 5 | 14 | 4 | 64.29% | 22.22% | 14 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.0184221' Biased in favor of strain: '' |
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| GRMZM2G125977 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.483 x 10-4 | 284 | 153 | 247 | 172 | 64.99% | 41.05% | 437 | 419 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.69e-10' χ2 p-value for Mo17 x B73: '.0002483' Biased in favor of strain: 'B73' |
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| GRMZM2G125977 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.6 x 10-16 | 14 | 54 | 3 | 146 | 20.59% | 97.99% | 68 | 149 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.60e-16' χ2 p-value for Mo17 x B73: '5.06e-16' Biased in favor of strain: 'Mo17' |
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| GRMZM2G125976 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G125976 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.9073 x 10-3 | 105 | 68 | 128 | 72 | 60.69% | 36.00% | 173 | 200 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0049073' χ2 p-value for Mo17 x B73: '.000075' Biased in favor of strain: 'B73' |