Displaying data sets 17301 - 17400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G42070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.14215 x 10-1 131 65 77 28 66.84% 26.67% 196 105 TAIR8 Avg. embryo expression (dissected): '545.413'
Avg. embryo expression (LCM): '472.29'
AT5G42070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.91651 x 10-1 15 4 78.95% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.56902 x 10-1 18 8 69.23% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.517 x 10-2 24 2 92.31% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.35287'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.20785'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.0175'
Avg. embryo expression (LCM): '26.5739'
AT5G42060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33333 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42053 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.69051'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42053 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.20644'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42053 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.1608'
Avg. embryo expression (LCM): '0'
AT5G42053 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42053 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42053 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.17317 x 10-1 38 6 18 29 86.36% 61.70% 44 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.7e-06'
Avg. expression score for this sample: '457.369'
Avg. expression score in LCM sample: '42.5064'
Tissue used: 'pure endosperm, no chalazal'
AT5G42050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8 x 10-6 157 39 39 176 80.10% 81.86% 196 215 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.7e-06'
Avg. expression score for this sample: '1122.16'
Avg. expression score in LCM sample: '42.5064'
Tissue used: 'full endosperm'
AT5G42050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.85732 x 10-1 47 39 12 12 54.65% 50.00% 86 24 TAIR8 Avg. embryo expression (dissected): '490.702'
Avg. embryo expression (LCM): '46.0021'
AT5G42050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.3179 x 10-2 43 4 91.49% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-5 207 18 92.00% 225 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-13 358 16 95.72% 374 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42040 RPN12b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.95805'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42040 RPN12b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.76826'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42040 RPN12b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.5668'
Avg. embryo expression (LCM): '3.59175'
AT5G42040 RPN12b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42040 RPN12b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42040 RPN12b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42030 ABIL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 2 33.33% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.257394'
Avg. expression score for this sample: '4.13156'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42030 ABIL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.02126 x 10-1 15 4 0 8 78.95% 100.00% 19 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.257394'
Avg. expression score for this sample: '15.3791'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42030 ABIL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 21 20 12 13 51.22% 52.00% 41 25 TAIR8 Avg. embryo expression (dissected): '69.7838'
Avg. embryo expression (LCM): '20.1188'
AT5G42030 ABIL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.74332 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42030 ABIL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.21673 x 10-1 24 1 96.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42030 ABIL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42020 BIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.74445 x 10-1 940 321 653 1132 74.54% 63.42% 1261 1785 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.0e-07'
Avg. expression score for this sample: '14809.8'
Avg. expression score in LCM sample: '3356.89'
Tissue used: 'pure endosperm, no chalazal'
AT5G42020 BIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.4 x 10-8 1331 355 956 2032 78.94% 68.01% 1686 2988 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.0e-07'
Avg. expression score for this sample: '6017.45'
Avg. expression score in LCM sample: '3356.89'
Tissue used: 'full endosperm'
AT5G42020 BIP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.054 x 10-3 1244 886 538 439 58.40% 44.93% 2130 977 TAIR8 Avg. embryo expression (dissected): '14102.7'
Avg. embryo expression (LCM): '3982.25'
AT5G42020 BIP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.4 x 10-5 399 237 62.74% 636 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42020 BIP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.8 x 10-7 3436 1748 66.28% 5184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42020 BIP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6924 804 89.60% 7728 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.168582'
Avg. expression score for this sample: '.324794'
Avg. expression score in LCM sample: '.617312'
Tissue used: 'pure endosperm, no chalazal'
AT5G42010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.64734 x 10-1 6 0 1 7 100.00% 87.50% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.168582'
Avg. expression score for this sample: '1.5262'
Avg. expression score in LCM sample: '.617312'
Tissue used: 'full endosperm'
AT5G42010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.121933'
Avg. embryo expression (LCM): '.52746'
AT5G42010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2059 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.27 x 10-4 48 70 40.68% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 59 7 89.39% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.05786 x 10-1 15 23 9 30 39.47% 76.92% 38 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.598969'
Avg. expression score for this sample: '62.7125'
Avg. expression score in LCM sample: '29.0725'
Tissue used: 'pure endosperm, no chalazal'
AT5G42000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.30485 x 10-1 12 7 8 23 63.16% 74.19% 19 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.598969'
Avg. expression score for this sample: '42.1502'
Avg. expression score in LCM sample: '29.0725'
Tissue used: 'full endosperm'
AT5G42000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54117 x 10-1 14 16 6 3 46.67% 33.33% 30 9 TAIR8 Avg. embryo expression (dissected): '61.3946'
Avg. embryo expression (LCM): '63.4836'
AT5G42000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.1031 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.9781 x 10-2 65 20 76.47% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.98 x 10-4 68 11 86.08% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41992 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.2983 x 10-2 301 45 94 92 86.99% 49.46% 346 186 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-25'
Avg. expression score for this sample: '427.332'
Avg. expression score in LCM sample: '295.061'
Tissue used: 'pure endosperm, no chalazal'
AT5G41992 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-28 565 46 91 349 92.47% 79.32% 611 440 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-25'
Avg. expression score for this sample: '772.766'
Avg. expression score in LCM sample: '295.061'
Tissue used: 'full endosperm'
AT5G41992 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.43962 x 10-1 139 81 37 15 63.18% 28.85% 220 52 TAIR8 Avg. embryo expression (dissected): '355.954'
Avg. embryo expression (LCM): '289.814'
AT5G41992 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7682 x 10-2 61 23 72.62% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41992 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-27 559 333 62.67% 892 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41992 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2046 102 95.25% 2148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41990 WNK8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.3653 x 10-2 289 50 94 105 85.25% 52.76% 339 199 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-21'
Avg. expression score for this sample: '314.573'
Avg. expression score in LCM sample: '206.814'
Tissue used: 'pure endosperm, no chalazal'
AT5G41990 WNK8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.1 x 10-25 538 58 110 419 90.27% 79.21% 596 529 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-21'
Avg. expression score for this sample: '509.823'
Avg. expression score in LCM sample: '206.814'
Tissue used: 'full endosperm'
AT5G41990 WNK8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.07351 x 10-1 133 71 55 24 65.20% 30.38% 204 79 TAIR8 Avg. embryo expression (dissected): '274.851'
Avg. embryo expression (LCM): '235.624'
AT5G41990 WNK8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.40909 x 10-1 82 23 78.10% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41990 WNK8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-17 641 326 66.29% 967 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41990 WNK8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-22 1773 152 92.10% 1925 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 1 3 60.00% 75.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.816'
Avg. expression score in LCM sample: '4.2183'
Tissue used: 'pure endosperm, no chalazal'
AT5G41980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 3 5 11 66.67% 68.75% 9 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.2635'
Avg. expression score in LCM sample: '4.2183'
Tissue used: 'full endosperm'
AT5G41980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.40867 x 10-1 6 1 0 3 85.71% 100.00% 7 3 TAIR8 Avg. embryo expression (dissected): '16.7281'
Avg. embryo expression (LCM): '22.5552'
AT5G41980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2381 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.39897 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3563 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '57.434'
Avg. expression score in LCM sample: '50.4726'
Tissue used: 'pure endosperm, no chalazal'
AT5G41970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '82.8159'
Avg. expression score in LCM sample: '50.4726'
Tissue used: 'full endosperm'
AT5G41970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '127.1'
Avg. embryo expression (LCM): '209.452'
AT5G41970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 5 1 4 58.33% 80.00% 12 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685003'
Avg. expression score for this sample: '16.6465'
Avg. expression score in LCM sample: '15.2417'
Tissue used: 'pure endosperm, no chalazal'
AT5G41960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.21855 x 10-1 11 5 5 19 68.75% 79.17% 16 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685003'
Avg. expression score for this sample: '35.4653'
Avg. expression score in LCM sample: '15.2417'
Tissue used: 'full endosperm'
AT5G41960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 5 2 1 2 71.43% 66.67% 7 3 TAIR8 Avg. embryo expression (dissected): '16.9382'
Avg. embryo expression (LCM): '26.0465'
AT5G41960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.15012 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.77765 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.003 x 10-3 34 1 97.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 26 3 17 10 89.66% 37.04% 29 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.369223'
Avg. expression score for this sample: '77.5724'
Avg. expression score in LCM sample: '58.8211'
Tissue used: 'pure endosperm, no chalazal'
AT5G41950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.02115 x 10-1 100 31 96 199 76.34% 67.46% 131 295 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.369223'
Avg. expression score for this sample: '134.904'
Avg. expression score in LCM sample: '58.8211'
Tissue used: 'full endosperm'
AT5G41950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.60917 x 10-1 22 6 6 4 78.57% 40.00% 28 10 TAIR8 Avg. embryo expression (dissected): '72.4066'
Avg. embryo expression (LCM): '78.6167'
AT5G41950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.37376 x 10-1 21 8 72.41% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.77027 x 10-1 163 86 65.46% 249 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6 x 10-14 241 20 92.34% 261 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.64734 x 10-1 7 0 1 6 100.00% 85.71% 7 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.826767'
Avg. expression score for this sample: '195.648'
Avg. expression score in LCM sample: '61.5696'
Tissue used: 'pure endosperm, no chalazal'
AT5G41940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 5 8 11 68.75% 57.89% 16 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.826767'
Avg. expression score for this sample: '132.832'
Avg. expression score in LCM sample: '61.5696'
Tissue used: 'full endosperm'
AT5G41940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 1 4 0 75.00% 0.00% 4 4 TAIR8 Avg. embryo expression (dissected): '142.66'
Avg. embryo expression (LCM): '52.6079'
AT5G41940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.98318 x 10-1 16 9 64.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 18 6 75.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '67.1148'
Avg. expression score in LCM sample: '53.0595'
Tissue used: 'pure endosperm, no chalazal'
AT5G41920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '55.0303'
Avg. expression score in LCM sample: '53.0595'
Tissue used: 'full endosperm'
AT5G41920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '102.348'
Avg. embryo expression (LCM): '98.2206'
AT5G41920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G41920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'