Displaying data sets 17201 - 17300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G42223 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42223 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.21247 x 10-1 48 18 24 67 72.73% 73.63% 66 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020901'
Avg. expression score for this sample: '155.274'
Avg. expression score in LCM sample: '74.6948'
Tissue used: 'pure endosperm, no chalazal'
AT5G42220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.3709 x 10-2 59 21 13 58 73.75% 81.69% 80 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020901'
Avg. expression score for this sample: '144.301'
Avg. expression score in LCM sample: '74.6948'
Tissue used: 'full endosperm'
AT5G42220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.21524 x 10-1 26 21 12 15 55.32% 55.56% 47 27 TAIR8 Avg. embryo expression (dissected): '179.408'
Avg. embryo expression (LCM): '92.7953'
AT5G42220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.99919 x 10-1 16 6 72.73% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 114 38 75.00% 152 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.09 x 10-4 113 13 89.68% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.308377'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.820584'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.94559'
Avg. embryo expression (LCM): '3.78013'
AT5G42210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42203 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.6991'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42203 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 4.44444 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.52251'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42203 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G42203 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42203 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42203 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '270.35'
Avg. expression score in LCM sample: '132.575'
Tissue used: 'pure endosperm, no chalazal'
AT5G42200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '175.073'
Avg. expression score in LCM sample: '132.575'
Tissue used: 'full endosperm'
AT5G42200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '29.777'
Avg. embryo expression (LCM): '29.5503'
AT5G42200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.53114 x 10-1 19 11 14 17 63.33% 54.84% 30 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '886.123'
Avg. expression score in LCM sample: '305.761'
Tissue used: 'pure endosperm, no chalazal'
AT5G42190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.46018 x 10-1 61 35 18 61 63.54% 77.22% 96 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '944.804'
Avg. expression score in LCM sample: '305.761'
Tissue used: 'full endosperm'
AT5G42190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.33147 x 10-1 13 20 4 8 39.39% 66.67% 33 12 TAIR8 Avg. embryo expression (dissected): '871.777'
Avg. embryo expression (LCM): '632.576'
AT5G42190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.42306 x 10-1 17 6 73.91% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.34 x 10-4 30 1 96.77% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5 x 10-5 46 3 93.88% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42180 PER64 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-10'
Avg. expression score for this sample: '1.68122'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42180 PER64 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.3 x 10-10 4 0 47 0 100.00% 0.00% 4 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.0e-10'
Avg. expression score for this sample: '35.6524'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42180 PER64 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.236997'
Avg. embryo expression (LCM): '0'
AT5G42180 PER64 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42180 PER64 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42180 PER64 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.91 x 10-4 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G42170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '29.3437'
Avg. expression score in LCM sample: '21.8999'
Tissue used: 'pure endosperm, no chalazal'
AT5G42150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '42.61'
Avg. expression score in LCM sample: '21.8999'
Tissue used: 'full endosperm'
AT5G42150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '40.9617'
Avg. embryo expression (LCM): '63.2827'
AT5G42150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42146 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.65024'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42146 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42146 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G42146 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42146 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42146 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.1897 x 10-2 52 28 37 28 65.00% 43.08% 80 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.783933'
Avg. expression score for this sample: '107.812'
Avg. expression score in LCM sample: '49.4144'
Tissue used: 'pure endosperm, no chalazal'
AT5G42140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.2985 x 10-2 143 48 43 103 74.87% 70.55% 191 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.783933'
Avg. expression score for this sample: '122.676'
Avg. expression score in LCM sample: '49.4144'
Tissue used: 'full endosperm'
AT5G42140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.0835 x 10-1 48 39 14 22 55.17% 61.11% 87 36 TAIR8 Avg. embryo expression (dissected): '96.6837'
Avg. embryo expression (LCM): '70.4787'
AT5G42140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.3147 x 10-2 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 102 48 68.00% 150 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9 x 10-8 237 42 84.95% 279 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42130 Mfl1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '167.732'
Avg. expression score in LCM sample: '87.8053'
Tissue used: 'pure endosperm, no chalazal'
AT5G42130 Mfl1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '143.237'
Avg. expression score in LCM sample: '87.8053'
Tissue used: 'full endosperm'
AT5G42130 Mfl1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '309.032'
Avg. embryo expression (LCM): '194.093'
AT5G42130 Mfl1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42130 Mfl1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42130 Mfl1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 5 0 1 2 100.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.448473'
Avg. expression score for this sample: '8.9643'
Avg. expression score in LCM sample: '1.411'
Tissue used: 'pure endosperm, no chalazal'
AT5G42120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.78716 x 10-1 17 8 0 5 68.00% 100.00% 25 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.448473'
Avg. expression score for this sample: '17.8039'
Avg. expression score in LCM sample: '1.411'
Tissue used: 'full endosperm'
AT5G42120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 8 3 3 55.56% 50.00% 18 6 TAIR8 Avg. embryo expression (dissected): '29.6872'
Avg. embryo expression (LCM): '6.05323'
AT5G42120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0638 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5367 x 10-2 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.0407'
Avg. expression score in LCM sample: '8.64237'
Tissue used: 'pure endosperm, no chalazal'
AT5G42110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '8.64237'
Tissue used: 'full endosperm'
AT5G42110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.12332'
Avg. embryo expression (LCM): '22.1659'
AT5G42110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42100 BG_PPAP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.18957 x 10-1 34 21 14 73 61.82% 83.91% 55 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.264083'
Avg. expression score for this sample: '1068.39'
Avg. expression score in LCM sample: '767.231'
Tissue used: 'pure endosperm, no chalazal'
AT5G42100 BG_PPAP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.19646 x 10-1 19 59 13 132 24.36% 91.03% 78 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.264083'
Avg. expression score for this sample: '484.823'
Avg. expression score in LCM sample: '767.231'
Tissue used: 'full endosperm'
AT5G42100 BG_PPAP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.42237 x 10-1 18 30 10 16 37.50% 61.54% 48 26 TAIR8 Avg. embryo expression (dissected): '1109.6'
Avg. embryo expression (LCM): '468.259'
AT5G42100 BG_PPAP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.00362 x 10-1 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42100 BG_PPAP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5 x 10-5 30 0 100.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42100 BG_PPAP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.14881 x 10-1 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.5657 x 10-2 498 169 233 429 74.66% 64.80% 667 662 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.0e-17'
Avg. expression score for this sample: '1278.72'
Avg. expression score in LCM sample: '614.373'
Tissue used: 'pure endosperm, no chalazal'
AT5G42090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.5 x 10-20 860 209 348 1135 80.45% 76.53% 1069 1483 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.0e-17'
Avg. expression score for this sample: '1561.54'
Avg. expression score in LCM sample: '614.373'
Tissue used: 'full endosperm'
AT5G42090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.8837 x 10-2 159 109 52 58 59.33% 52.73% 268 110 TAIR8 Avg. embryo expression (dissected): '496.45'
Avg. embryo expression (LCM): '233.866'
AT5G42090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.53182 x 10-1 145 38 79.23% 183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6 x 10-5 1747 439 79.92% 2186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2875 175 94.26% 3050 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42080 DL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '421.828'
Avg. expression score in LCM sample: '347.047'
Tissue used: 'pure endosperm, no chalazal'
AT5G42080 DL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 1 1 66.67% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '365.719'
Avg. expression score in LCM sample: '347.047'
Tissue used: 'full endosperm'
AT5G42080 DL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '413.105'
Avg. embryo expression (LCM): '316.3'
AT5G42080 DL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42080 DL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42080 DL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.085 x 10-3 138 27 20 41 83.64% 67.21% 165 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.076563'
Avg. expression score for this sample: '269.774'
Avg. expression score in LCM sample: '102.591'
Tissue used: 'pure endosperm, no chalazal'
AT5G42070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.35186 x 10-1 70 32 30 42 68.63% 58.33% 102 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.076563'
Avg. expression score for this sample: '144.269'
Avg. expression score in LCM sample: '102.591'
Tissue used: 'full endosperm'