Displaying data sets 17101 - 17200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G42340 PUB15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.42424 x 10-1 0 0 5 1 16.67% 0 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '1.0356'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42340 PUB15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '.388071'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42340 PUB15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.915715'
Avg. embryo expression (LCM): '0'
AT5G42340 PUB15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42340 PUB15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42340 PUB15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.7544 x 10-2 116 108 76 162 51.79% 68.07% 224 238 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078403'
Avg. expression score for this sample: '120.48'
Avg. expression score in LCM sample: '113.894'
Tissue used: 'pure endosperm, no chalazal'
AT5G42330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.97805 x 10-1 86 32 74 113 72.88% 60.43% 118 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078403'
Avg. expression score for this sample: '55.6755'
Avg. expression score in LCM sample: '113.894'
Tissue used: 'full endosperm'
AT5G42330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.43 x 10-4 197 296 51 36 39.96% 41.38% 493 87 TAIR8 Avg. embryo expression (dissected): '215.69'
Avg. embryo expression (LCM): '189.999'
AT5G42330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.59715 x 10-1 20 9 68.97% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.8 x 10-20 1380 349 79.81% 1729 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 268 297 47.43% 565 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42325 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047826'
Avg. expression score for this sample: '3.32597'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42325 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 4.7826 x 10-2 0 0 0 13 100.00% 0 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047826'
Avg. expression score for this sample: '13.8872'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42325 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '2.30771'
Avg. embryo expression (LCM): '0'
AT5G42325 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42325 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.3 x 10-9 0 17 0.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42325 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 7 0 14 30.00% 100.00% 10 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000551'
Avg. expression score for this sample: '41.2304'
Avg. expression score in LCM sample: '21.9146'
Tissue used: 'pure endosperm, no chalazal'
AT5G42320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.74 x 10-4 17 12 11 112 58.62% 91.06% 29 123 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000551'
Avg. expression score for this sample: '84.3138'
Avg. expression score in LCM sample: '21.9146'
Tissue used: 'full endosperm'
AT5G42320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 13 0 4 35.00% 100.00% 20 4 TAIR8 Avg. embryo expression (dissected): '58.1936'
Avg. embryo expression (LCM): '69.2982'
AT5G42320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.28354 x 10-1 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 83 17 83.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.30461 x 10-1 39 9 81.25% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 8 10 11 72.41% 52.38% 29 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.211189'
Avg. expression score for this sample: '132.6'
Avg. expression score in LCM sample: '33.0556'
Tissue used: 'pure endosperm, no chalazal'
AT5G42310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.12832 x 10-1 52 9 13 26 85.25% 66.67% 61 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.211189'
Avg. expression score for this sample: '174.74'
Avg. expression score in LCM sample: '33.0556'
Tissue used: 'full endosperm'
AT5G42310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.22208 x 10-1 14 16 3 0 46.67% 0.00% 30 3 TAIR8 Avg. embryo expression (dissected): '231.908'
Avg. embryo expression (LCM): '108.531'
AT5G42310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.84176 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.965 x 10-3 37 3 92.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42300 UBL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8909.18'
Avg. expression score in LCM sample: '1917.02'
Tissue used: 'pure endosperm, no chalazal'
AT5G42300 UBL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7231.05'
Avg. expression score in LCM sample: '1917.02'
Tissue used: 'full endosperm'
AT5G42300 UBL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4334.57'
Avg. embryo expression (LCM): '1573.95'
AT5G42300 UBL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42300 UBL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.375 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42300 UBL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.2674'
Avg. expression score in LCM sample: '14.0218'
Tissue used: 'pure endosperm, no chalazal'
AT5G42290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.4668'
Avg. expression score in LCM sample: '14.0218'
Tissue used: 'full endosperm'
AT5G42290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '30.8994'
Avg. embryo expression (LCM): '4.79738'
AT5G42290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.745 x 10-3 43 0 6 7 100.00% 53.85% 43 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000105'
Avg. expression score for this sample: '22.8409'
Avg. expression score in LCM sample: '18.6517'
Tissue used: 'pure endosperm, no chalazal'
AT5G42280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.739 x 10-3 117 6 25 16 95.12% 39.02% 123 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000105'
Avg. expression score for this sample: '39.3754'
Avg. expression score in LCM sample: '18.6517'
Tissue used: 'full endosperm'
AT5G42280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.6835 x 10-2 29 1 9 0 96.67% 0.00% 30 9 TAIR8 Avg. embryo expression (dissected): '19.7075'
Avg. embryo expression (LCM): '3.71734'
AT5G42280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.30635 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-18 29 63 31.52% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8822 x 10-2 177 17 91.24% 194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42270 VAR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.48528 x 10-1 119 69 64 107 63.30% 62.57% 188 171 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.740877'
Avg. expression score for this sample: '661.78'
Avg. expression score in LCM sample: '365.214'
Tissue used: 'pure endosperm, no chalazal'
AT5G42270 VAR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.83725 x 10-1 251 135 164 415 65.03% 71.68% 386 579 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.740877'
Avg. expression score for this sample: '1027.9'
Avg. expression score in LCM sample: '365.214'
Tissue used: 'full endosperm'
AT5G42270 VAR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.85199 x 10-1 202 237 65 63 46.01% 49.22% 439 128 TAIR8 Avg. embryo expression (dissected): '1340.38'
Avg. embryo expression (LCM): '780.917'
AT5G42270 VAR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.75275 x 10-1 75 28 72.82% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42270 VAR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5 x 10-8 202 38 84.17% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42270 VAR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.9 x 10-13 342 60 85.07% 402 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42260 BGLU12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.449482'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42260 BGLU12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.69921 x 10-1 0 6 0 5 0.00% 100.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.449482'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42260 BGLU12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.190625'
Avg. embryo expression (LCM): '0'
AT5G42260 BGLU12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42260 BGLU12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.1899 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42260 BGLU12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5942 x 10-2 0 14 0.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.6859 x 10-2 27 3 1 9 90.00% 90.00% 30 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-13'
Avg. expression score for this sample: '41.7797'
Avg. expression score in LCM sample: '27.0589'
Tissue used: 'pure endosperm, no chalazal'
AT5G42250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-11 49 0 20 167 100.00% 89.30% 49 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.3e-13'
Avg. expression score for this sample: '111.273'
Avg. expression score in LCM sample: '27.0589'
Tissue used: 'full endosperm'
AT5G42250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 7 14 0 3 33.33% 100.00% 21 3 TAIR8 Avg. embryo expression (dissected): '24.3307'
Avg. embryo expression (LCM): '3.55408'
AT5G42250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.05437 x 10-1 23 1 95.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.52 x 10-4 145 1 99.32% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.41 x 10-4 258 4 98.47% 262 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42242 LCR57 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '829.14'
Avg. expression score in LCM sample: '631.07'
Tissue used: 'pure endosperm, no chalazal'
AT5G42242 LCR57 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '144.584'
Avg. expression score in LCM sample: '631.07'
Tissue used: 'full endosperm'
AT5G42242 LCR57 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '31.3235'
Avg. embryo expression (LCM): '0'
AT5G42242 LCR57 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42242 LCR57 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42242 LCR57 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42240 scpl42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.56985 x 10-1 23 8 10 25 74.19% 71.43% 31 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '256.274'
Avg. expression score in LCM sample: '128.504'
Tissue used: 'pure endosperm, no chalazal'
AT5G42240 scpl42 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.18527 x 10-1 35 16 36 55 68.63% 60.44% 51 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '131.65'
Avg. expression score in LCM sample: '128.504'
Tissue used: 'full endosperm'
AT5G42240 scpl42 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.8772 x 10-2 67 35 13 11 65.69% 45.83% 102 24 TAIR8 Avg. embryo expression (dissected): '422.65'
Avg. embryo expression (LCM): '302.838'
AT5G42240 scpl42 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.46922 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42240 scpl42 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7438 x 10-2 31 32 49.21% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42240 scpl42 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-7 100 9 91.74% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 9.9 x 10-21 1041 135 591 1415 88.52% 70.54% 1176 2006 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2025.55'
Avg. expression score in LCM sample: '456.679'
Tissue used: 'pure endosperm, no chalazal'
AT5G42235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 0.0 1185 25 358 3023 97.93% 89.41% 1210 3381 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1788.17'
Avg. expression score in LCM sample: '456.679'
Tissue used: 'full endosperm'
AT5G42235 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.1 x 10-14 101 8 9 37 92.66% 80.43% 109 46 TAIR8 Avg. embryo expression (dissected): '147.476'
Avg. embryo expression (LCM): '2.24799'
AT5G42235 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 798 13 98.40% 811 TAIR8 Mutant effect: 'MEG affected by fie'
AT5G42235 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 4325 1649 72.40% 5974 TAIR8 Mutant effect: 'MEG affected by fie'
AT5G42235 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6478 457 93.41% 6935 TAIR8 Mutant effect: 'MEG affected by fie'
AT5G42232 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.13528'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42232 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.05486'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42232 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G42232 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42232 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42232 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42230 scpl41 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.30769 x 10-1 7 0 0 0 100.00% 7 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00431'
Avg. expression score for this sample: '1.83665'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42230 scpl41 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0741 x 10-2 6 0 0 8 100.00% 100.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00431'
Avg. expression score for this sample: '2.83959'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42230 scpl41 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.47822'
Avg. embryo expression (LCM): '0'
AT5G42230 scpl41 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42230 scpl41 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 20 0 100.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42230 scpl41 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 39 0 100.00% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42223 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42223 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42223 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.29503'
Avg. embryo expression (LCM): '0'
AT5G42223 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'