Displaying data sets 17001 - 17100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G42500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.420757'
Avg. embryo expression (LCM): '0'
AT5G42500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 3 3 7 70.00% 70.00% 10 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.21661'
Avg. expression score in LCM sample: '.455635'
Tissue used: 'pure endosperm, no chalazal'
AT5G42490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 8 3 2 69.23% 40.00% 26 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.0594'
Avg. expression score in LCM sample: '.455635'
Tissue used: 'full endosperm'
AT5G42490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 11 0 1 50.00% 100.00% 22 1 TAIR8 Avg. embryo expression (dissected): '5.11989'
Avg. embryo expression (LCM): '2.70009'
AT5G42490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.98672 x 10-1 6 5 54.55% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42480 ARC6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 43 13 23 25 76.79% 52.08% 56 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.746589'
Avg. expression score for this sample: '94.0594'
Avg. expression score in LCM sample: '78.5016'
Tissue used: 'pure endosperm, no chalazal'
AT5G42480 ARC6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.61401 x 10-1 73 40 35 97 64.60% 73.48% 113 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.746589'
Avg. expression score for this sample: '121.776'
Avg. expression score in LCM sample: '78.5016'
Tissue used: 'full endosperm'
AT5G42480 ARC6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.4243 x 10-2 112 76 26 30 59.57% 53.57% 188 56 TAIR8 Avg. embryo expression (dissected): '296.041'
Avg. embryo expression (LCM): '224.246'
AT5G42480 ARC6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.80969 x 10-1 13 9 59.09% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42480 ARC6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.70699 x 10-1 88 35 71.54% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42480 ARC6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-7 156 20 88.64% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.33971 x 10-1 30 25 7 69 54.55% 90.79% 55 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027948'
Avg. expression score for this sample: '37.7848'
Avg. expression score in LCM sample: '15.3299'
Tissue used: 'pure endosperm, no chalazal'
AT5G42470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.42075 x 10-1 39 17 10 48 69.64% 82.76% 56 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027948'
Avg. expression score for this sample: '41.9461'
Avg. expression score in LCM sample: '15.3299'
Tissue used: 'full endosperm'
AT5G42470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.6789 x 10-2 9 37 12 13 19.57% 52.00% 46 25 TAIR8 Avg. embryo expression (dissected): '38.4249'
Avg. embryo expression (LCM): '31.8234'
AT5G42470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.1339 x 10-1 20 4 83.33% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.26 x 10-4 80 6 93.02% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6654 x 10-2 36 22 62.07% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.3707'
Avg. expression score in LCM sample: '25.1922'
Tissue used: 'pure endosperm, no chalazal'
AT5G42460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '64.8403'
Avg. expression score in LCM sample: '25.1922'
Tissue used: 'full endosperm'
AT5G42460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.96217'
Avg. embryo expression (LCM): '1.87123'
AT5G42460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 2 1 100.00% 33.33% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.800028'
Avg. expression score for this sample: '1.87947'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.76066 x 10-1 9 1 10 6 90.00% 37.50% 10 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.800028'
Avg. expression score for this sample: '4.12748'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35095 x 10-1 18 4 2 0 81.82% 0.00% 22 2 TAIR8 Avg. embryo expression (dissected): '6.7014'
Avg. embryo expression (LCM): '25.6069'
AT5G42450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.74021 x 10-1 19 18 51.35% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.5 x 10-5 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.70034 x 10-1 28 23 10 46 54.90% 82.14% 51 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001503'
Avg. expression score for this sample: '132.744'
Avg. expression score in LCM sample: '23.1492'
Tissue used: 'pure endosperm, no chalazal'
AT5G42440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.055 x 10-3 128 59 86 318 68.45% 78.71% 187 404 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001503'
Avg. expression score for this sample: '366.357'
Avg. expression score in LCM sample: '23.1492'
Tissue used: 'full endosperm'
AT5G42440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.44759 x 10-1 40 30 7 9 57.14% 56.25% 70 16 TAIR8 Avg. embryo expression (dissected): '195.127'
Avg. embryo expression (LCM): '88.0105'
AT5G42440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.09068 x 10-1 40 9 81.63% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4 x 10-15 254 13 95.13% 267 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-17 294 14 95.45% 308 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.219465'
Avg. expression score in LCM sample: '6.18782'
Tissue used: 'pure endosperm, no chalazal'
AT5G42430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.47774'
Avg. expression score in LCM sample: '6.18782'
Tissue used: 'full endosperm'
AT5G42430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.244584'
Avg. embryo expression (LCM): '0'
AT5G42430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.0695'
Avg. expression score in LCM sample: '25.9565'
Tissue used: 'pure endosperm, no chalazal'
AT5G42420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 5 2 6 50.00% 75.00% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '66.0873'
Avg. expression score in LCM sample: '25.9565'
Tissue used: 'full endosperm'
AT5G42420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '64.4851'
Avg. embryo expression (LCM): '39.9112'
AT5G42420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2245 x 10-2 18 1 94.74% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.37233 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G42410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42405 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G42405 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42405 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42405 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42400 SDG25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.91944 x 10-1 53 24 28 72 68.83% 72.00% 77 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000803'
Avg. expression score for this sample: '82.5787'
Avg. expression score in LCM sample: '38.3469'
Tissue used: 'pure endosperm, no chalazal'
AT5G42400 SDG25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.58 x 10-4 164 62 55 219 72.57% 79.93% 226 274 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000803'
Avg. expression score for this sample: '100.236'
Avg. expression score in LCM sample: '38.3469'
Tissue used: 'full endosperm'
AT5G42400 SDG25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.12288 x 10-1 43 81 24 31 34.68% 56.36% 124 55 TAIR8 Avg. embryo expression (dissected): '125.781'
Avg. embryo expression (LCM): '70.2401'
AT5G42400 SDG25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.06 x 10-4 52 3 94.55% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42400 SDG25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.0 x 10-9 154 10 93.90% 164 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42400 SDG25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-12 272 19 93.47% 291 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42390 SPP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.17819 x 10-1 102 41 39 31 71.33% 44.29% 143 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.035077'
Avg. expression score for this sample: '60.141'
Avg. expression score in LCM sample: '68.6246'
Tissue used: 'pure endosperm, no chalazal'
AT5G42390 SPP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.95 x 10-4 156 42 48 155 78.79% 76.35% 198 203 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.035077'
Avg. expression score for this sample: '105.74'
Avg. expression score in LCM sample: '68.6246'
Tissue used: 'full endosperm'
AT5G42390 SPP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.98309 x 10-1 98 75 27 13 56.65% 32.50% 173 40 TAIR8 Avg. embryo expression (dissected): '90.8668'
Avg. embryo expression (LCM): '87.9477'
AT5G42390 SPP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.39604 x 10-1 23 13 63.89% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42390 SPP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.08752 x 10-1 80 32 71.43% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42390 SPP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-21 378 21 94.74% 399 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42380 CML37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.056 x 10-3 29 9 1 36 76.32% 97.30% 38 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-29'
Avg. expression score for this sample: '196.349'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42380 CML37 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7 x 10-28 106 23 29 456 82.17% 94.02% 129 485 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-29'
Avg. expression score for this sample: '642.192'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42380 CML37 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.41786 x 10-1 21 16 0 0 56.76% 37 0 TAIR8 Avg. embryo expression (dissected): '97.8766'
Avg. embryo expression (LCM): '0'
AT5G42380 CML37 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0314 x 10-1 33 0 100.00% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42380 CML37 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.2277 x 10-2 169 8 95.48% 177 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42380 CML37 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 238 66 78.29% 304 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.42482'
Avg. expression score in LCM sample: '3.24824'
Tissue used: 'pure endosperm, no chalazal'
AT5G42370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.0231'
Avg. expression score in LCM sample: '3.24824'
Tissue used: 'full endosperm'
AT5G42370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.78679'
Avg. embryo expression (LCM): '11.7925'
AT5G42370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.12686 x 10-1 59 22 29 53 72.84% 64.63% 81 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.217075'
Avg. expression score for this sample: '109.845'
Avg. expression score in LCM sample: '127.475'
Tissue used: 'pure endosperm, no chalazal'
AT5G42360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.13928 x 10-1 170 33 79 104 83.74% 56.83% 203 183 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.217075'
Avg. expression score for this sample: '147.811'
Avg. expression score in LCM sample: '127.475'
Tissue used: 'full endosperm'
AT5G42360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.73332 x 10-1 42 32 14 13 56.76% 48.15% 74 27 TAIR8 Avg. embryo expression (dissected): '120.41'
Avg. embryo expression (LCM): '97.4797'
AT5G42360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.57012 x 10-1 19 6 76.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.18987 x 10-1 258 137 65.32% 395 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9 x 10-16 517 61 89.45% 578 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.29541 x 10-1 22 9 14 32 70.97% 69.57% 31 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.132414'
Avg. expression score for this sample: '114.778'
Avg. expression score in LCM sample: '96.4624'
Tissue used: 'pure endosperm, no chalazal'
AT5G42350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.39343 x 10-1 36 21 19 84 63.16% 81.55% 57 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.132414'
Avg. expression score for this sample: '144.075'
Avg. expression score in LCM sample: '96.4624'
Tissue used: 'full endosperm'
AT5G42350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 17 1 4 48.48% 80.00% 33 5 TAIR8 Avg. embryo expression (dissected): '105.558'
Avg. embryo expression (LCM): '84.7955'
AT5G42350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.2973 x 10-2 19 15 55.88% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.7 x 10-4 212 35 85.83% 247 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.05239 x 10-1 118 61 65.92% 179 TAIR8 Mutant effect: 'N/A (not a MEG)'