GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM5G832772	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.386 x 10^-4	70	7	21	3	90.91%	12.50%	77	24	RefGen V2	χ2 p-value for B73 x Mo17: '7.00e-13' χ2 p-value for Mo17 x B73: '.0002386' Biased in favor of strain: 'B73'
GRMZM5G832772	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6 x 10^-6	62	4	84	10	93.94%	10.64%	66	94	RefGen V2	χ2 p-value for B73 x Mo17: '2.60e-06' χ2 p-value for Mo17 x B73: '1.01e-30' Biased in favor of strain: 'B73'
GRMZM5G832740	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.97979 x 10^-2	741	327	413	614	69.38%	59.79%	1068	1027	RefGen V2	χ2 p-value for B73 x Mo17: '.0597979' χ2 p-value for Mo17 x B73: '2.90e-06' Biased in favor of strain: ''
GRMZM5G832740	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.411898 x 10^-1	285	168	215	240	62.91%	52.75%	453	455	RefGen V2	χ2 p-value for B73 x Mo17: '3.86e-08' χ2 p-value for Mo17 x B73: '.2411898' Biased in favor of strain: ''
GRMZM5G832672	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.797125 x 10^-1	25	10	13	7	71.43%	35.00%	35	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0112299' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM5G832672	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.698258 x 10^-1	8	3	15	19	72.73%	55.88%	11	34	RefGen V2	χ2 p-value for B73 x Mo17: '.6698258' χ2 p-value for Mo17 x B73: '.1822215' Biased in favor of strain: ''
GRMZM5G832651	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.827649 x 10^-1	15	8	13	20	65.22%	60.61%	23	33	RefGen V2	χ2 p-value for B73 x Mo17: '.8827649' χ2 p-value for Mo17 x B73: '.4601808' Biased in favor of strain: ''
GRMZM5G832651	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.927167 x 10^-1	19	15	13	23	55.88%	63.89%	34	36	RefGen V2	χ2 p-value for B73 x Mo17: '.4927167' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: ''
GRMZM5G832582	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.16 x 10^-5	518	287	397	286	64.35%	41.87%	805	683	RefGen V2	χ2 p-value for B73 x Mo17: '3.90e-16' χ2 p-value for Mo17 x B73: '.0000216' Biased in favor of strain: 'B73'
GRMZM5G832582	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.17 x 10^-6	290	84	201	211	77.54%	51.21%	374	412	RefGen V2	χ2 p-value for B73 x Mo17: '8.17e-06' χ2 p-value for Mo17 x B73: '2.86e-11' Biased in favor of strain: 'B73'
GRMZM5G832491	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G832491	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.967056 x 10^-1	35	18	35	25	66.04%	41.67%	53	60	RefGen V2	χ2 p-value for B73 x Mo17: '.0195367' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: ''
GRMZM5G832452	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.28 x 10^-11	68	0	44	0	100.00%	0.00%	68	44	RefGen V2	χ2 p-value for B73 x Mo17: '1.63e-16' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: 'B73'
GRMZM5G832452	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.53 x 10^-9	73	0	20	0	100.00%	0.00%	73	20	RefGen V2	χ2 p-value for B73 x Mo17: '1.53e-09' χ2 p-value for Mo17 x B73: '2.54e-10' Biased in favor of strain: 'B73'
GRMZM5G832409	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	3	0	50.00%	0.00%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM5G832409	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.755 x 10^-3	186	109	182	127	63.05%	41.10%	295	309	RefGen V2	χ2 p-value for B73 x Mo17: '7.36e-06' χ2 p-value for Mo17 x B73: '.001755' Biased in favor of strain: 'B73'
GRMZM5G832381	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.793723 x 10^-1	92	54	79	63	63.01%	44.37%	146	142	RefGen V2	χ2 p-value for B73 x Mo17: '.0016614' χ2 p-value for Mo17 x B73: '.1793723' Biased in favor of strain: ''
GRMZM5G832381	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	7	3	100.00%	30.00%	3	10	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.0139063' Biased in favor of strain: ''
GRMZM5G832380	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.128448 x 10^-1	198	107	76	147	64.92%	65.92%	305	223	RefGen V2	χ2 p-value for B73 x Mo17: '.5170458' χ2 p-value for Mo17 x B73: '.8128448' Biased in favor of strain: ''
GRMZM5G832380	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.44655 x 10^-2	81	131	54	75	38.21%	58.14%	212	129	RefGen V2	χ2 p-value for B73 x Mo17: '.0005947' χ2 p-value for Mo17 x B73: '.0644655' Biased in favor of strain: ''
GRMZM5G832378	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.58293 x 10^-2	43	27	47	23	61.43%	32.86%	70	70	RefGen V2	χ2 p-value for B73 x Mo17: '.0558293' χ2 p-value for Mo17 x B73: '.0041236' Biased in favor of strain: ''
GRMZM5G832378	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.762173 x 10^-1	47	32	22	62	59.49%	73.81%	79	84	RefGen V2	χ2 p-value for B73 x Mo17: '.1762173' χ2 p-value for Mo17 x B73: '.164915' Biased in favor of strain: ''
GRMZM5G832362	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G832362	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95551 x 10^-2	10	0	12	5	100.00%	29.41%	10	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: ''
GRMZM5G832300	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.652088 x 10^-1	64	56	72	58	53.33%	44.62%	120	130	RefGen V2	χ2 p-value for B73 x Mo17: '.4652088' χ2 p-value for Mo17 x B73: '.2194916' Biased in favor of strain: ''
GRMZM5G832300	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.94 x 10^-5	50	3	38	28	94.34%	42.42%	53	66	RefGen V2	χ2 p-value for B73 x Mo17: '.0000192' χ2 p-value for Mo17 x B73: '.0000294' Biased in favor of strain: 'B73'
GRMZM5G832281	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.336183 x 10^-1	15	3	3	17	83.33%	85.00%	18	20	RefGen V2	χ2 p-value for B73 x Mo17: '.1336183' χ2 p-value for Mo17 x B73: '.0819903' Biased in favor of strain: ''
GRMZM5G832281	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.35547 x 10^-2	29	13	36	9	69.05%	20.00%	42	45	RefGen V2	χ2 p-value for B73 x Mo17: '.0135547' χ2 p-value for Mo17 x B73: '.000057' Biased in favor of strain: 'B73'
GRMZM5G832175	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.32 x 10^-14	169	57	147	35	74.78%	19.23%	226	182	RefGen V2	χ2 p-value for B73 x Mo17: '9.32e-14' χ2 p-value for Mo17 x B73: '1.02e-16' Biased in favor of strain: 'B73'
GRMZM5G832175	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.04 x 10^-9	117	12	56	16	90.70%	22.22%	129	72	RefGen V2	χ2 p-value for B73 x Mo17: '7.04e-09' χ2 p-value for Mo17 x B73: '1.24e-15' Biased in favor of strain: 'B73'
GRMZM5G832149	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	3	100.00%	75.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: ''
GRMZM5G832149	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.388827 x 10^-1	17	19	14	20	47.22%	58.82%	36	34	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.3034837' Biased in favor of strain: ''
GRMZM5G832135	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	6	1	1	57.14%	50.00%	14	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM5G832135	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.630244 x 10^-1	9	1	8	14	90.00%	63.64%	10	22	RefGen V2	χ2 p-value for B73 x Mo17: '.1175272' χ2 p-value for Mo17 x B73: '.7630244' Biased in favor of strain: ''
GRMZM5G832108	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.369794 x 10^-1	907	423	484	837	68.20%	63.36%	1330	1321	RefGen V2	χ2 p-value for B73 x Mo17: '.2369794' χ2 p-value for Mo17 x B73: '.010815' Biased in favor of strain: ''
GRMZM5G832108	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.640625 x 10^-1	734	558	552	533	56.81%	49.12%	1292	1085	RefGen V2	χ2 p-value for B73 x Mo17: '9.76e-07' χ2 p-value for Mo17 x B73: '.5640625' Biased in favor of strain: ''
GRMZM5G831993	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05042 x 10^-1	1020	595	914	846	63.16%	48.07%	1615	1760	RefGen V2	χ2 p-value for B73 x Mo17: '3.87e-26' χ2 p-value for Mo17 x B73: '.105042' Biased in favor of strain: ''
GRMZM5G831993	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.81 x 10^-9	1663	540	674	1000	75.49%	59.74%	2203	1674	RefGen V2	χ2 p-value for B73 x Mo17: '1.59e-18' χ2 p-value for Mo17 x B73: '1.81e-09' Biased in favor of strain: 'B73'
GRMZM5G831843	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.112994 x 10^-1	21	17	14	18	55.26%	56.25%	38	32	RefGen V2	χ2 p-value for B73 x Mo17: '.1358994' χ2 p-value for Mo17 x B73: '.2112994' Biased in favor of strain: ''
GRMZM5G831843	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.235 x 10^-4	82	35	72	34	70.09%	32.08%	117	106	RefGen V2	χ2 p-value for B73 x Mo17: '.0000139' χ2 p-value for Mo17 x B73: '.0002235' Biased in favor of strain: 'B73'
GRMZM5G831795	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.330289 x 10^-1	44	46	40	78	48.89%	66.10%	90	118	RefGen V2	χ2 p-value for B73 x Mo17: '.8330289' χ2 p-value for Mo17 x B73: '.0004684' Biased in favor of strain: ''
GRMZM5G831795	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.526834 x 10^-1	31	30	20	38	50.82%	65.52%	61	58	RefGen V2	χ2 p-value for B73 x Mo17: '.0086501' χ2 p-value for Mo17 x B73: '.8526834' Biased in favor of strain: ''
GRMZM5G831780	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.71 x 10^-9	875	292	447	422	74.98%	48.56%	1167	869	RefGen V2	χ2 p-value for B73 x Mo17: '1.71e-09' χ2 p-value for Mo17 x B73: '1.02e-29' Biased in favor of strain: 'B73'
GRMZM5G831780	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.06 x 10^-18	670	365	485	248	64.73%	33.83%	1035	733	RefGen V2	χ2 p-value for B73 x Mo17: '2.53e-21' χ2 p-value for Mo17 x B73: '2.06e-18' Biased in favor of strain: 'B73'
GRMZM5G831577	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	671	249	776	287	72.93%	27.00%	920	1063	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G831577	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.51 x 10^-5	80	13	45	25	86.02%	35.71%	93	70	RefGen V2	χ2 p-value for B73 x Mo17: '.0000751' χ2 p-value for Mo17 x B73: '3.94e-08' Biased in favor of strain: 'B73'
GRMZM5G831408	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.72 x 10^-23	1221	336	567	586	78.42%	50.82%	1557	1153	RefGen V2	χ2 p-value for B73 x Mo17: '7.72e-23' χ2 p-value for Mo17 x B73: '3.65e-30' Biased in favor of strain: 'B73'
GRMZM5G831408	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.47 x 10^-11	600	376	566	365	61.48%	39.21%	976	931	RefGen V2	χ2 p-value for B73 x Mo17: '7.50e-13' χ2 p-value for Mo17 x B73: '4.47e-11' Biased in favor of strain: 'B73'
GRMZM5G831142	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.216 x 10^-4	733	591	718	588	55.36%	45.02%	1324	1306	RefGen V2	χ2 p-value for B73 x Mo17: '.0000952' χ2 p-value for Mo17 x B73: '.0003216' Biased in favor of strain: 'B73'
GRMZM5G831142	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.13231 x 10^-1	328	177	163	365	64.95%	69.13%	505	528	RefGen V2	χ2 p-value for B73 x Mo17: '.413231' χ2 p-value for Mo17 x B73: '.2300846' Biased in favor of strain: ''
GRMZM5G831102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.89819 x 10^-2	93	33	73	92	73.81%	55.76%	126	165	RefGen V2	χ2 p-value for B73 x Mo17: '.0889819' χ2 p-value for Mo17 x B73: '.0029529' Biased in favor of strain: ''
GRMZM5G831102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.243817 x 10^-1	188	146	223	221	56.29%	49.77%	334	444	RefGen V2	χ2 p-value for B73 x Mo17: '.021554' χ2 p-value for Mo17 x B73: '.9243817' Biased in favor of strain: ''
GRMZM5G831025	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.31409 x 10^-2	24	10	26	12	70.59%	31.58%	34	38	RefGen V2	χ2 p-value for B73 x Mo17: '.0163512' χ2 p-value for Mo17 x B73: '.0231409' Biased in favor of strain: 'B73'
GRMZM5G831025	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G831009	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G831009	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	3	0.00%	100.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM5G830983	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.7258 x 10^-3	73	41	68	29	64.04%	29.90%	114	97	RefGen V2	χ2 p-value for B73 x Mo17: '.0027258' χ2 p-value for Mo17 x B73: '.000075' Biased in favor of strain: 'B73'
GRMZM5G830983	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1546 x 10^-3	90	22	51	61	80.36%	54.46%	112	112	RefGen V2	χ2 p-value for B73 x Mo17: '.0021159' χ2 p-value for Mo17 x B73: '.0061546' Biased in favor of strain: 'B73'
GRMZM5G830932	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	497	13	199	27	97.45%	11.95%	510	226	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G830932	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	650	10	643	14	98.48%	2.13%	660	657	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G830874	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	151	125	109	109	54.71%	50.00%	276	218	RefGen V2	χ2 p-value for B73 x Mo17: '.1175791' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM5G830874	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.309865 x 10^-1	110	48	67	74	69.62%	52.48%	158	141	RefGen V2	χ2 p-value for B73 x Mo17: '.4309865' χ2 p-value for Mo17 x B73: '.000353' Biased in favor of strain: ''
GRMZM5G830776	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.472456 x 10^-1	94	39	52	115	70.68%	68.86%	133	167	RefGen V2	χ2 p-value for B73 x Mo17: '.3266068' χ2 p-value for Mo17 x B73: '.5472456' Biased in favor of strain: ''
GRMZM5G830776	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.5263 x 10^-3	38	18	26	7	67.86%	21.21%	56	33	RefGen V2	χ2 p-value for B73 x Mo17: '.0075263' χ2 p-value for Mo17 x B73: '.0009414' Biased in favor of strain: 'B73'
GRMZM5G830695	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1498	720	1466	677	67.54%	31.59%	2218	2143	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G830695	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.74 x 10^-17	815	190	414	472	81.09%	53.27%	1005	886	RefGen V2	χ2 p-value for B73 x Mo17: '2.94e-22' χ2 p-value for Mo17 x B73: '2.74e-17' Biased in favor of strain: 'B73'
GRMZM5G830596	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.023432 x 10^-1	34	9	19	28	79.07%	59.57%	43	47	RefGen V2	χ2 p-value for B73 x Mo17: '.0844736' χ2 p-value for Mo17 x B73: '.3023432' Biased in favor of strain: ''
GRMZM5G830596	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.769439 x 10^-1	83	72	46	35	53.55%	43.21%	155	81	RefGen V2	χ2 p-value for B73 x Mo17: '.3769439' χ2 p-value for Mo17 x B73: '.2216236' Biased in favor of strain: ''
GRMZM5G830545	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.21679 x 10^-2	5	35	14	29	12.50%	67.44%	40	43	RefGen V2	χ2 p-value for B73 x Mo17: '2.10e-06' χ2 p-value for Mo17 x B73: '.0221679' Biased in favor of strain: 'Mo17'
GRMZM5G830545	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	2	100.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G830436	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.740152 x 10^-1	23	8	8	40	74.19%	83.33%	31	48	RefGen V2	χ2 p-value for B73 x Mo17: '.3740152' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM5G830436	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.840857 x 10^-1	78	73	63	49	51.66%	43.75%	151	112	RefGen V2	χ2 p-value for B73 x Mo17: '.6840857' χ2 p-value for Mo17 x B73: '.1858767' Biased in favor of strain: ''
GRMZM5G830403	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.028286 x 10^-1	246	193	198	203	56.04%	50.62%	439	401	RefGen V2	χ2 p-value for B73 x Mo17: '.0114208' χ2 p-value for Mo17 x B73: '.8028286' Biased in favor of strain: ''
GRMZM5G830403	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.077778 x 10^-1	288	121	158	388	70.42%	71.06%	409	546	RefGen V2	χ2 p-value for B73 x Mo17: '.1077778' χ2 p-value for Mo17 x B73: '.0293452' Biased in favor of strain: ''
GRMZM5G830365	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	PEG	0.0	8	308	651	34	2.53%	4.96%	316	685	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM5G830365	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	PEG	1.32 x 10^-18	10	104	171	14	8.77%	7.57%	114	185	RefGen V2	χ2 p-value for B73 x Mo17: '1.32e-18' χ2 p-value for Mo17 x B73: '8.02e-31' Biased in favor of strain: ''
GRMZM5G830269	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	316	24	320	13	92.94%	3.90%	340	333	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G830269	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	775	36	444	63	95.56%	12.43%	811	507	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G829955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.366763 x 10^-1	83	50	37	63	62.41%	63.00%	133	100	RefGen V2	χ2 p-value for B73 x Mo17: '.2972286' χ2 p-value for Mo17 x B73: '.4366763' Biased in favor of strain: ''
GRMZM5G829955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.5087 x 10^-3	109	62	84	51	63.74%	37.78%	171	135	RefGen V2	χ2 p-value for B73 x Mo17: '.0003254' χ2 p-value for Mo17 x B73: '.0045087' Biased in favor of strain: 'B73'
GRMZM5G829946	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.005 x 10^-4	181	60	218	144	75.10%	39.78%	241	362	RefGen V2	χ2 p-value for B73 x Mo17: '6.48e-15' χ2 p-value for Mo17 x B73: '.0001005' Biased in favor of strain: 'B73'
GRMZM5G829946	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.674777 x 10^-1	92	35	48	73	72.44%	60.33%	127	121	RefGen V2	χ2 p-value for B73 x Mo17: '.1674777' χ2 p-value for Mo17 x B73: '.1392749' Biased in favor of strain: ''
GRMZM5G829897	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G829897	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.088094 x 10^-1	45	20	10	4	69.23%	28.57%	65	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0019295' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: ''
GRMZM5G829894	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	437	90	407	102	82.92%	20.04%	527	509	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G829894	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	856	77	415	145	91.75%	25.89%	933	560	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G829840	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.638316 x 10^-1	13	4	6	11	76.47%	64.71%	17	17	RefGen V2	χ2 p-value for B73 x Mo17: '.3911817' χ2 p-value for Mo17 x B73: '.8638316' Biased in favor of strain: ''
GRMZM5G829840	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8862 x 10^-3	51	18	48	22	73.91%	31.43%	69	70	RefGen V2	χ2 p-value for B73 x Mo17: '.0000711' χ2 p-value for Mo17 x B73: '.0018862' Biased in favor of strain: 'B73'
GRMZM5G829831	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.81 x 10^-5	125	69	176	77	64.43%	30.43%	194	253	RefGen V2	χ2 p-value for B73 x Mo17: '.0000581' χ2 p-value for Mo17 x B73: '4.84e-10' Biased in favor of strain: 'B73'
GRMZM5G829831	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.8201 x 10^-3	88	23	60	68	79.28%	53.12%	111	128	RefGen V2	χ2 p-value for B73 x Mo17: '.0048201' χ2 p-value for Mo17 x B73: '.001154' Biased in favor of strain: 'B73'
GRMZM5G829738	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5446 x 10^-3	604	240	401	495	71.56%	55.25%	844	896	RefGen V2	χ2 p-value for B73 x Mo17: '.0025446' χ2 p-value for Mo17 x B73: '4.10e-13' Biased in favor of strain: 'B73'
GRMZM5G829738	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.3855 x 10^-3	479	316	384	309	60.25%	44.59%	795	693	RefGen V2	χ2 p-value for B73 x Mo17: '7.43e-09' χ2 p-value for Mo17 x B73: '.0043855' Biased in favor of strain: 'B73'
GRMZM5G829563	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	3	0.00%	100.00%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM5G829563	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	5	2		28.57%	0	7	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G829554	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G829554	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	3	1	25.00%	25.00%	4	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G829476	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	715	14	1467	7	98.08%	0.47%	729	1474	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G829476	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G829396	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.164124 x 10^-1	4	10	5	14	28.57%	73.68%	14	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0024967' χ2 p-value for Mo17 x B73: '.5164124' Biased in favor of strain: ''
GRMZM5G829396	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.0908 x 10^-2	174	136	107	74	56.13%	40.88%	310	181	RefGen V2	χ2 p-value for B73 x Mo17: '.030908' χ2 p-value for Mo17 x B73: '.0141721' Biased in favor of strain: 'B73'

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