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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G65340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65330 AGL78 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.75112'
Avg. expression score in LCM sample: '8.59828'
Tissue used: 'pure endosperm, no chalazal'
AT5G65330 AGL78 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.96037'
Avg. expression score in LCM sample: '8.59828'
Tissue used: 'full endosperm'
AT5G65330 AGL78 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '1.13296'
Avg. embryo expression (LCM): '0'
AT5G65330 AGL78 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65330 AGL78 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.93939 x 10-1 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65330 AGL78 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G65320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65310 HB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.03373 x 10-1 7 9 1 1 43.75% 50.00% 16 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231799'
Avg. expression score for this sample: '6.04069'
Avg. expression score in LCM sample: '2.41046'
Tissue used: 'pure endosperm, no chalazal'
AT5G65310 HB5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.33222 x 10-1 3 1 7 7 75.00% 50.00% 4 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231799'
Avg. expression score for this sample: '3.3171'
Avg. expression score in LCM sample: '2.41046'
Tissue used: 'full endosperm'
AT5G65310 HB5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.89757 x 10-1 44 32 15 14 57.89% 48.28% 76 29 TAIR8 Avg. embryo expression (dissected): '51.9306'
Avg. embryo expression (LCM): '37.7385'
AT5G65310 HB5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65310 HB5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.529 x 10-3 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65310 HB5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8 x 10-11 75 0 100.00% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65305 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65305 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G65305 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65305 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65305 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 3 0 4 50.00% 100.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020151'
Avg. expression score for this sample: '21.9623'
Avg. expression score in LCM sample: '9.42136'
Tissue used: 'pure endosperm, no chalazal'
AT5G65300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.949 x 10-3 14 7 7 59 66.67% 89.39% 21 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020151'
Avg. expression score for this sample: '81.6501'
Avg. expression score in LCM sample: '9.42136'
Tissue used: 'full endosperm'
AT5G65300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '3.98455'
Avg. embryo expression (LCM): '2.00937'
AT5G65300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.61911 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.20753 x 10-1 20 2 90.91% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3985 x 10-1 16 5 76.19% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54545 x 10-1 2 0 0 4 100.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '80.904'
Avg. expression score in LCM sample: '32.6441'
Tissue used: 'pure endosperm, no chalazal'
AT5G65290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 0 1 33.33% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '85.5537'
Avg. expression score in LCM sample: '32.6441'
Tissue used: 'full endosperm'
AT5G65290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '54.1663'
Avg. embryo expression (LCM): '21.2742'
AT5G65290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.80805 x 10-1 7 5 58.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.21267 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65280 GCL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.48154 x 10-1 28 8 19 34 77.78% 64.15% 36 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034872'
Avg. expression score for this sample: '54.3804'
Avg. expression score in LCM sample: '34.4225'
Tissue used: 'pure endosperm, no chalazal'
AT5G65280 GCL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.011 x 10-3 25 2 7 40 92.59% 85.11% 27 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034872'
Avg. expression score for this sample: '35.7555'
Avg. expression score in LCM sample: '34.4225'
Tissue used: 'full endosperm'
AT5G65280 GCL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '2.29091'
Avg. embryo expression (LCM): '0'
AT5G65280 GCL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.47525 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65280 GCL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 37 11 77.08% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65280 GCL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9585 x 10-2 101 15 87.07% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65274 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 4 6 100.00% 60.00% 5 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.098952'
Avg. expression score for this sample: '8.97677'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65274 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.7175 x 10-2 18 2 2 12 90.00% 85.71% 20 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.098952'
Avg. expression score for this sample: '12.3005'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65274 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Avg. embryo expression (dissected): '1.43724'
Avg. embryo expression (LCM): '0'
AT5G65274 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65274 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.55982 x 10-1 44 4 91.67% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65274 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1223 x 10-2 45 1 97.83% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65270 RABA4a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.87039 x 10-1 24 10 11 31 70.59% 73.81% 34 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001038'
Avg. expression score for this sample: '355.017'
Avg. expression score in LCM sample: '362.818'
Tissue used: 'pure endosperm, no chalazal'
AT5G65270 RABA4a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.73 x 10-4 29 5 6 60 85.29% 90.91% 34 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001038'
Avg. expression score for this sample: '395.511'
Avg. expression score in LCM sample: '362.818'
Tissue used: 'full endosperm'
AT5G65270 RABA4a embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 20 3 7 42.86% 70.00% 35 10 TAIR8 Avg. embryo expression (dissected): '284.734'
Avg. embryo expression (LCM): '307.371'
AT5G65270 RABA4a endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 22 5 81.48% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65270 RABA4a endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.82233 x 10-1 74 12 86.05% 86 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65270 RABA4a endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.79 x 10-4 132 6 95.65% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.54 x 10-4 740 449 303 1147 62.24% 79.10% 1189 1450 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-10'
Avg. expression score for this sample: '1042.44'
Avg. expression score in LCM sample: '635.376'
Tissue used: 'pure endosperm, no chalazal'
AT5G65260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-8 601 297 151 752 66.93% 83.28% 898 903 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-10'
Avg. expression score for this sample: '479.827'
Avg. expression score in LCM sample: '635.376'
Tissue used: 'full endosperm'
AT5G65260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.33589 x 10-1 385 436 137 193 46.89% 58.48% 821 330 TAIR8 Avg. embryo expression (dissected): '747.309'
Avg. embryo expression (LCM): '661.938'
AT5G65260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.2 x 10-12 293 36 89.06% 329 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-5 1307 370 77.94% 1677 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.547 x 10-3 1040 316 76.70% 1356 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 27 11 14 22 71.05% 61.11% 38 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '61.3891'
Avg. expression score in LCM sample: '32.7176'
Tissue used: 'pure endosperm, no chalazal'
AT5G65250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 63 36 47 103 63.64% 68.67% 99 150 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '84.7063'
Avg. expression score in LCM sample: '32.7176'
Tissue used: 'full endosperm'
AT5G65250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 33 37 9 11 47.14% 55.00% 70 20 TAIR8 Avg. embryo expression (dissected): '98.07'
Avg. embryo expression (LCM): '69.3736'
AT5G65250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.88303 x 10-1 21 6 77.78% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.6 x 10-5 76 11 87.36% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.0 x 10-11 120 7 94.49% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.79168 x 10-1 3 4 5 4 42.86% 44.44% 7 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.68847'
Avg. expression score for this sample: '127.641'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'pure endosperm, no chalazal'
AT5G65240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.09992 x 10-1 57 14 16 26 80.28% 61.90% 71 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.68847'
Avg. expression score for this sample: '177.493'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'full endosperm'
AT5G65240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 10 4 3 54.55% 42.86% 22 7 TAIR8 Avg. embryo expression (dissected): '176.558'
Avg. embryo expression (LCM): '62.6924'
AT5G65240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.0635 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1928 x 10-2 35 4 89.74% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65230 MYB53 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.07678 x 10-1 5 8 1 5 38.46% 83.33% 13 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.717528'
Avg. expression score for this sample: '9.45439'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65230 MYB53 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 14 2 29 17.65% 93.55% 17 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.717528'
Avg. expression score for this sample: '9.04954'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65230 MYB53 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.53358 x 10-1 25 58 14 23 30.12% 62.16% 83 37 TAIR8 Avg. embryo expression (dissected): '94.6385'
Avg. embryo expression (LCM): '26.7372'
AT5G65230 MYB53 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65230 MYB53 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.31117 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65230 MYB53 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.93066 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 25 13 4 10 65.79% 71.43% 38 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.147572'
Avg. expression score for this sample: '736.537'
Avg. expression score in LCM sample: '195.203'
Tissue used: 'pure endosperm, no chalazal'
AT5G65220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9432 x 10-2 36 5 20 50 87.80% 71.43% 41 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.147572'
Avg. expression score for this sample: '546.705'
Avg. expression score in LCM sample: '195.203'
Tissue used: 'full endosperm'
AT5G65220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.69517 x 10-1 41 29 4 7 58.57% 63.64% 70 11 TAIR8 Avg. embryo expression (dissected): '1562.93'
Avg. embryo expression (LCM): '2104.54'
AT5G65220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4639 x 10-2 8 9 47.06% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.04315 x 10-1 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65210 TGA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.141348'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65210 TGA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.56656'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65210 TGA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.315053'
Avg. embryo expression (LCM): '0'
AT5G65210 TGA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65210 TGA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65210 TGA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65207 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '97.0832'
Avg. expression score in LCM sample: '29.4693'
Tissue used: 'pure endosperm, no chalazal'
AT5G65207 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '352.779'
Avg. expression score in LCM sample: '29.4693'
Tissue used: 'full endosperm'
AT5G65207 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '48.4901'
Avg. embryo expression (LCM): '72.3876'
AT5G65207 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65207 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65207 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65205 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.0317'
Avg. expression score in LCM sample: '16.3588'
Tissue used: 'pure endosperm, no chalazal'
AT5G65205 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '38.7093'
Avg. expression score in LCM sample: '16.3588'
Tissue used: 'full endosperm'