Displaying data sets 168901 - 169000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G01860 PFC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '61.3861'
Avg. embryo expression (LCM): '44.9471'
AT1G01860 PFC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01860 PFC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.8936'
Avg. expression score in LCM sample: '40.5515'
Tissue used: 'full endosperm'
AT1G01860 PFC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01860 PFC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01860 PFC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.3581'
Avg. expression score in LCM sample: '40.5515'
Tissue used: 'pure endosperm, no chalazal'
AT1G01840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.5474'
Avg. expression score in LCM sample: '3.58629'
Tissue used: 'pure endosperm, no chalazal'
AT1G01840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '41.1834'
Avg. embryo expression (LCM): '35.1766'
AT1G01840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.6577'
Avg. expression score in LCM sample: '3.58629'
Tissue used: 'full endosperm'
AT1G01830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '60.6312'
Avg. expression score in LCM sample: '41.1836'
Tissue used: 'full endosperm'
AT1G01830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '114.997'
Avg. expression score in LCM sample: '41.1836'
Tissue used: 'pure endosperm, no chalazal'
AT1G01830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '68.1293'
Avg. embryo expression (LCM): '51.8795'
AT1G01830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01820 PEX11C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01820 PEX11C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '246.146'
Avg. embryo expression (LCM): '131.626'
AT1G01820 PEX11C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '245.891'
Avg. expression score in LCM sample: '66.4199'
Tissue used: 'full endosperm'
AT1G01820 PEX11C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01820 PEX11C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01820 PEX11C endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '217.784'
Avg. expression score in LCM sample: '66.4199'
Tissue used: 'pure endosperm, no chalazal'
AT1G01810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.683'
Avg. expression score in LCM sample: '2.30757'
Tissue used: 'pure endosperm, no chalazal'
AT1G01810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.85266'
Avg. embryo expression (LCM): '17.7202'
AT1G01810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.4471'
Avg. expression score in LCM sample: '2.30757'
Tissue used: 'full endosperm'
AT1G01800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 13 10 38 31.58% 79.17% 19 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.73768'
Avg. expression score for this sample: '216.392'
Avg. expression score in LCM sample: '78.2811'
Tissue used: 'full endosperm'
AT1G01800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 2 6 0 3 25.00% 100.00% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.73768'
Avg. expression score for this sample: '176.081'
Avg. expression score in LCM sample: '78.2811'
Tissue used: 'pure endosperm, no chalazal'
AT1G01800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8556 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '248.222'
Avg. embryo expression (LCM): '167.217'
AT1G01790 KEA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.4449 x 10-1 39 23 11 8 62.90% 42.11% 62 19 TAIR8 Avg. embryo expression (dissected): '23.2448'
Avg. embryo expression (LCM): '30.5048'
AT1G01790 KEA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.60102 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01790 KEA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.65708 x 10-1 31 14 25 36 68.89% 59.02% 45 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.473113'
Avg. expression score for this sample: '12.9267'
Avg. expression score in LCM sample: '7.7605'
Tissue used: 'full endosperm'
AT1G01790 KEA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.497 x 10-3 54 13 80.60% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01790 KEA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.60828 x 10-1 19 6 76.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01790 KEA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.17323 x 10-1 17 14 5 10 54.84% 66.67% 31 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.473113'
Avg. expression score for this sample: '9.39355'
Avg. expression score in LCM sample: '7.7605'
Tissue used: 'pure endosperm, no chalazal'
AT1G01780 PLIM2b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 3 66.67% 100.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.620031'
Avg. expression score for this sample: '28.6377'
Avg. expression score in LCM sample: '18.3136'
Tissue used: 'pure endosperm, no chalazal'
AT1G01780 PLIM2b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.275 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01780 PLIM2b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01780 PLIM2b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.14286 x 10-1 4 0 0 0 100.00% 4 0 TAIR8 Avg. embryo expression (dissected): '31.3769'
Avg. embryo expression (LCM): '13.6888'
AT1G01780 PLIM2b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.89294 x 10-1 9 6 3 15 60.00% 83.33% 15 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.620031'
Avg. expression score for this sample: '26.5197'
Avg. expression score in LCM sample: '18.3136'
Tissue used: 'full endosperm'
AT1G01780 PLIM2b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.50336 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 4 12 10 81.82% 45.45% 22 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5239.83'
Avg. expression score in LCM sample: '1819.75'
Tissue used: 'full endosperm'
AT1G01770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2004 x 10-2 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 1 2 75.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3525.1'
Avg. expression score in LCM sample: '1819.75'
Tissue used: 'pure endosperm, no chalazal'
AT1G01770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0066 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '3643.96'
Avg. embryo expression (LCM): '1704.37'
AT1G01760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.37186 x 10-1 3 1 5 0 75.00% 0.00% 4 5 TAIR8 Avg. embryo expression (dissected): '43.2876'
Avg. embryo expression (LCM): '30.869'
AT1G01760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.1572'
Avg. expression score in LCM sample: '22.576'
Tissue used: 'full endosperm'
AT1G01760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.28571 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.65734 x 10-1 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 0 2 0 100.00% 0.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.4653'
Avg. expression score in LCM sample: '22.576'
Tissue used: 'pure endosperm, no chalazal'
AT1G01750 ADF11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.9271'
Avg. expression score in LCM sample: '5.76158'
Tissue used: 'pure endosperm, no chalazal'
AT1G01750 ADF11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01750 ADF11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01750 ADF11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '50.8755'
Avg. embryo expression (LCM): '32.7904'
AT1G01750 ADF11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01750 ADF11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '31.1322'
Avg. expression score in LCM sample: '5.76158'
Tissue used: 'full endosperm'
AT1G01740 BSK4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 2 0 100.00% 0.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.18379'
Avg. expression score in LCM sample: '1.01416'
Tissue used: 'full endosperm'
AT1G01740 BSK4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01740 BSK4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01740 BSK4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.42538'
Avg. expression score in LCM sample: '1.01416'
Tissue used: 'pure endosperm, no chalazal'
AT1G01740 BSK4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01740 BSK4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '14.1249'
Avg. embryo expression (LCM): '16.5396'
AT1G01730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.49917 x 10-1 3 6 1 0 33.33% 0.00% 9 1 TAIR8 Avg. embryo expression (dissected): '71.5367'
Avg. embryo expression (LCM): '83.075'
AT1G01730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.07985 x 10-1 9 2 2 4 81.82% 66.67% 11 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '112.481'
Avg. expression score in LCM sample: '68.066'
Tissue used: 'full endosperm'
AT1G01730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.63781 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.08515 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.33222 x 10-1 9 3 5 1 75.00% 16.67% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '94.7274'
Avg. expression score in LCM sample: '68.066'
Tissue used: 'pure endosperm, no chalazal'
AT1G01725 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '406.383'
Avg. expression score in LCM sample: '127.093'
Tissue used: 'pure endosperm, no chalazal'
AT1G01725 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01725 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01725 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '119.686'
Avg. embryo expression (LCM): '80.7516'
AT1G01725 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '473.654'
Avg. expression score in LCM sample: '127.093'
Tissue used: 'full endosperm'
AT1G01725 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01720 ATAF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.4 x 10-9 155 16 90.64% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01720 ATAF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.0 x 10-8 269 178 166 811 60.18% 83.01% 447 977 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000099'
Avg. expression score for this sample: '330.113'
Avg. expression score in LCM sample: '15.668'
Tissue used: 'full endosperm'
AT1G01720 ATAF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8 x 10-11 290 39 88.15% 329 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01720 ATAF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.87384 x 10-1 320 187 116 260 63.12% 69.15% 507 376 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000099'
Avg. expression score for this sample: '325.452'
Avg. expression score in LCM sample: '15.668'
Tissue used: 'pure endosperm, no chalazal'
AT1G01720 ATAF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-15 651 108 85.77% 759 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01720 ATAF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.11372 x 10-1 155 211 42 48 42.35% 53.33% 366 90 TAIR8 Avg. embryo expression (dissected): '274.388'
Avg. embryo expression (LCM): '46.8686'
AT1G01710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 3 6 2 0 33.33% 0.00% 9 2 TAIR8 Avg. embryo expression (dissected): '31.532'
Avg. embryo expression (LCM): '21.8394'
AT1G01710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 3 0 3 70.00% 100.00% 10 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.523097'
Avg. expression score for this sample: '52.6737'
Avg. expression score in LCM sample: '8.92163'
Tissue used: 'full endosperm'
AT1G01710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6087 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6486 x 10-2 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 2 3 100.00% 60.00% 4 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.523097'
Avg. expression score for this sample: '22.8974'
Avg. expression score in LCM sample: '8.92163'
Tissue used: 'pure endosperm, no chalazal'
AT1G01700 ROPGEF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.176716'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G01700 ROPGEF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01700 ROPGEF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G01700 ROPGEF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.02652'
Avg. embryo expression (LCM): '1.73308'