Displaying data sets 168301 - 168400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G02790 PGA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 2 1 0.00% 33.33% 1 3 TAIR8 Avg. embryo expression (dissected): '14.5331'
Avg. embryo expression (LCM): '0'
AT1G02790 PGA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.5913 x 10-2 10 12 45.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02790 PGA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.58 x 10-4 0 5 8 0 0.00% 0.00% 5 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.6e-08'
Avg. expression score for this sample: '7.43284'
Avg. expression score in LCM sample: '13.331'
Tissue used: 'full endosperm'
AT1G02790 PGA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02790 PGA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.2 x 10-5 3 1 42 11 75.00% 20.75% 4 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.6e-08'
Avg. expression score for this sample: '41.9881'
Avg. expression score in LCM sample: '13.331'
Tissue used: 'pure endosperm, no chalazal'
AT1G02790 PGA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.38466 x 10-1 0 7 0.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02780 emb2386 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4295 655 86.77% 4950 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02780 emb2386 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.20391 x 10-1 2576 689 1191 1170 78.90% 49.56% 3265 2361 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.39371'
Avg. expression score for this sample: '2349.85'
Avg. expression score in LCM sample: '916.827'
Tissue used: 'pure endosperm, no chalazal'
AT1G02780 emb2386 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-11 2796 1036 72.96% 3832 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02780 emb2386 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.0 5211 2634 1122 560 66.42% 33.29% 7845 1682 TAIR8 Avg. embryo expression (dissected): '5451.18'
Avg. embryo expression (LCM): '5330.66'
AT1G02780 emb2386 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.1 x 10-15 578 474 54.94% 1052 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02780 emb2386 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.97403 x 10-1 2231 591 1445 2044 79.06% 58.58% 2822 3489 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.39371'
Avg. expression score for this sample: '1817.92'
Avg. expression score in LCM sample: '916.827'
Tissue used: 'full endosperm'
AT1G02770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.205 x 10-3 130 70 47 220 65.00% 82.40% 200 267 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027438'
Avg. expression score for this sample: '265.895'
Avg. expression score in LCM sample: '135.823'
Tissue used: 'full endosperm'
AT1G02770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7168 x 10-2 66 14 82.50% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.31565 x 10-1 83 49 51 124 62.88% 70.86% 132 175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027438'
Avg. expression score for this sample: '247.328'
Avg. expression score in LCM sample: '135.823'
Tissue used: 'pure endosperm, no chalazal'
AT1G02770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.06653 x 10-1 593 191 75.64% 784 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.77086 x 10-1 2 15 1 8 11.76% 88.89% 17 9 TAIR8 Avg. embryo expression (dissected): '37.0799'
Avg. embryo expression (LCM): '21.764'
AT1G02770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.49549 x 10-1 1214 430 73.84% 1644 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G02760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G02760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G02750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.2627'
Avg. expression score in LCM sample: '8.84814'
Tissue used: 'pure endosperm, no chalazal'
AT1G02750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '13.0647'
Avg. embryo expression (LCM): '27.7419'
AT1G02750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.9308'
Avg. expression score in LCM sample: '8.84814'
Tissue used: 'full endosperm'
AT1G02750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.6287 x 10-2 11 2 1 15 84.62% 93.75% 13 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.096048'
Avg. expression score for this sample: '13.4435'
Avg. expression score in LCM sample: '2.24878'
Tissue used: 'full endosperm'
AT1G02740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.96781 x 10-1 31 1 96.88% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.096048'
Avg. expression score for this sample: '7.89793'
Avg. expression score in LCM sample: '2.24878'
Tissue used: 'pure endosperm, no chalazal'
AT1G02740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 2 0 0 60.00% 5 0 TAIR8 Avg. embryo expression (dissected): '11.1351'
Avg. embryo expression (LCM): '16.3136'
AT1G02730 CSLD5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '529.615'
Avg. embryo expression (LCM): '514.927'
AT1G02730 CSLD5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02730 CSLD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '78.842'
Avg. expression score in LCM sample: '339.301'
Tissue used: 'full endosperm'
AT1G02730 CSLD5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02730 CSLD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '157.268'
Avg. expression score in LCM sample: '339.301'
Tissue used: 'pure endosperm, no chalazal'
AT1G02730 CSLD5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02720 GATL5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4628 30 99.36% 4658 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02720 GATL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5 x 10-16 235 31 74 374 88.35% 83.48% 266 448 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1300.22'
Avg. expression score in LCM sample: '68.8009'
Tissue used: 'pure endosperm, no chalazal'
AT1G02720 GATL5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1 x 10-5 6419 505 92.71% 6924 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02720 GATL5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 917 65 97 930 93.38% 90.56% 982 1027 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1046.22'
Avg. expression score in LCM sample: '68.8009'
Tissue used: 'full endosperm'
AT1G02720 GATL5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.9828 x 10-2 86 73 26 52 54.09% 66.67% 159 78 TAIR8 Avg. embryo expression (dissected): '556.678'
Avg. embryo expression (LCM): '167.87'
AT1G02720 GATL5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.03122 x 10-1 190 29 86.76% 219 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.823 x 10-3 20 0 0 8 100.00% 100.00% 20 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002844'
Avg. expression score for this sample: '25.7402'
Avg. expression score in LCM sample: '10.1416'
Tissue used: 'pure endosperm, no chalazal'
AT1G02710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3727 x 10-2 56 0 100.00% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.66667 x 10-1 3 0 0 2 100.00% 100.00% 3 2 TAIR8 Avg. embryo expression (dissected): '4.00443'
Avg. embryo expression (LCM): '0'
AT1G02710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.10132 x 10-1 24 4 3 3 85.71% 50.00% 28 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002844'
Avg. expression score for this sample: '19.0551'
Avg. expression score in LCM sample: '10.1416'
Tissue used: 'full endosperm'
AT1G02700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.1164'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G02700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.3976'
Avg. embryo expression (LCM): '0'
AT1G02700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '56.2795'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G02690 IMPA-6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 4 9 7 80.00% 43.75% 20 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177622'
Avg. expression score for this sample: '25.057'
Avg. expression score in LCM sample: '49.5761'
Tissue used: 'pure endosperm, no chalazal'
AT1G02690 IMPA-6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.538 x 10-2 74 29 71.84% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02690 IMPA-6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.3318 x 10-2 82 37 68.91% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02690 IMPA-6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.78518 x 10-1 12 9 18 17 57.14% 48.57% 21 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177622'
Avg. expression score for this sample: '23.8658'
Avg. expression score in LCM sample: '49.5761'
Tissue used: 'full endosperm'
AT1G02690 IMPA-6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 26 25 8 8 50.98% 50.00% 51 16 TAIR8 Avg. embryo expression (dissected): '68.7944'
Avg. embryo expression (LCM): '89.2915'
AT1G02690 IMPA-6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.95964 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02680 TAF13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 17 8 68.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02680 TAF13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 352 6 98.32% 358 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02680 TAF13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.33804 x 10-1 84 18 31 30 82.35% 49.18% 102 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.436656'
Avg. expression score for this sample: '81.8691'
Avg. expression score in LCM sample: '17.9462'
Tissue used: 'pure endosperm, no chalazal'
AT1G02680 TAF13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.58721 x 10-1 50 31 11 9 61.73% 45.00% 81 20 TAIR8 Avg. embryo expression (dissected): '72.2939'
Avg. embryo expression (LCM): '75.2635'
AT1G02680 TAF13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0 x 10-5 51 54 48.57% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02680 TAF13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.42627 x 10-1 201 36 84 61 84.81% 42.07% 237 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.436656'
Avg. expression score for this sample: '124.47'
Avg. expression score in LCM sample: '17.9462'
Tissue used: 'full endosperm'
AT1G02670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.72548 x 10-1 6 6 2 2 50.00% 50.00% 12 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.549897'
Avg. expression score for this sample: '6.32358'
Avg. expression score in LCM sample: '4.36528'
Tissue used: 'full endosperm'
AT1G02670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.02401'
Avg. embryo expression (LCM): '2.4866'
AT1G02670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5508 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 2 2 66.67% 50.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.549897'
Avg. expression score for this sample: '3.07536'
Avg. expression score in LCM sample: '4.36528'
Tissue used: 'pure endosperm, no chalazal'
AT1G02670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.15351 x 10-1 9 5 64.29% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.85392 x 10-1 471 47 90.93% 518 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.2 x 10-7 221 26 45 115 89.47% 71.88% 247 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '97.2332'
Avg. expression score in LCM sample: '14.6685'
Tissue used: 'pure endosperm, no chalazal'
AT1G02660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0464 x 10-2 308 45 87.25% 353 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 299 17 41 792 94.62% 95.08% 316 833 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '227.468'
Avg. expression score in LCM sample: '14.6685'
Tissue used: 'full endosperm'
AT1G02660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7005 x 10-1 50 30 14 12 62.50% 46.15% 80 26 TAIR8 Avg. embryo expression (dissected): '37.5327'
Avg. embryo expression (LCM): '8.20075'
AT1G02660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.18021 x 10-1 118 5 95.93% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.33222 x 10-1 2 0 8 8 100.00% 50.00% 2 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.6802'
Avg. expression score in LCM sample: '12.4197'
Tissue used: 'pure endosperm, no chalazal'
AT1G02650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '4.19858'
Avg. embryo expression (LCM): '.816307'
AT1G02650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.80115 x 10-1 5 2 2 11 71.43% 84.62% 7 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.71581'
Avg. expression score in LCM sample: '12.4197'
Tissue used: 'full endosperm'
AT1G02640 BXL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '2.28358'
Avg. expression score in LCM sample: '.573219'
Tissue used: 'full endosperm'
AT1G02640 BXL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.03567 x 10-1 8 4 1 1 66.67% 50.00% 12 2 TAIR8 Avg. embryo expression (dissected): '35.7288'
Avg. embryo expression (LCM): '19.4784'
AT1G02640 BXL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02640 BXL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02640 BXL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.05495 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02640 BXL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '5.1986'
Avg. expression score in LCM sample: '.573219'
Tissue used: 'pure endosperm, no chalazal'
AT1G02630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G02630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G02630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'