Displaying data sets 16601 - 16700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G43050 NPQ6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.582 x 10-3 54 11 83.08% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43050 NPQ6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-5 69 9 88.46% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.09195'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.61632'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.8897'
Avg. embryo expression (LCM): '4.55876'
AT5G43040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.8832'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.4004'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.610837'
Avg. embryo expression (LCM): '0'
AT5G43030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.31577 x 10-1 66 66 22 77 50.00% 77.78% 132 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00802'
Avg. expression score for this sample: '55.3288'
Avg. expression score in LCM sample: '19.8863'
Tissue used: 'pure endosperm, no chalazal'
AT5G43020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1 x 10-5 89 49 46 272 64.49% 85.53% 138 318 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00802'
Avg. expression score for this sample: '75.8853'
Avg. expression score in LCM sample: '19.8863'
Tissue used: 'full endosperm'
AT5G43020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7736 x 10-2 511 660 145 173 43.64% 54.40% 1171 318 TAIR8 Avg. embryo expression (dissected): '480.544'
Avg. embryo expression (LCM): '387.947'
AT5G43020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.2838 x 10-2 51 10 83.61% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.26 x 10-4 39 1 97.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.821 x 10-3 57 40 58.76% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43010 RPT4A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.62643 x 10-1 132 50 56 126 72.53% 69.23% 182 182 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-06'
Avg. expression score for this sample: '102.627'
Avg. expression score in LCM sample: '54.7791'
Tissue used: 'pure endosperm, no chalazal'
AT5G43010 RPT4A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-8 156 34 37 203 82.11% 84.58% 190 240 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-06'
Avg. expression score for this sample: '101.271'
Avg. expression score in LCM sample: '54.7791'
Tissue used: 'full endosperm'
AT5G43010 RPT4A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.9975 x 10-1 148 146 39 22 50.34% 36.07% 294 61 TAIR8 Avg. embryo expression (dissected): '161.689'
Avg. embryo expression (LCM): '204.68'
AT5G43010 RPT4A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5006 x 10-2 60 30 66.67% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43010 RPT4A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.70393 x 10-1 408 140 74.45% 548 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43010 RPT4A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.35 x 10-4 444 73 85.88% 517 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.42424 x 10-1 1 4 1 0 20.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240482'
Avg. expression score for this sample: '10.3387'
Avg. expression score in LCM sample: '15.5945'
Tissue used: 'pure endosperm, no chalazal'
AT5G43000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 2 1 100.00% 33.33% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240482'
Avg. expression score for this sample: '7.256'
Avg. expression score in LCM sample: '15.5945'
Tissue used: 'full endosperm'
AT5G43000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.342361'
Avg. embryo expression (LCM): '1.48191'
AT5G43000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.16667 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42990 UBC18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.14152 x 10-1 85 17 46 47 83.33% 50.54% 102 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '75.1506'
Avg. expression score in LCM sample: '24.3985'
Tissue used: 'pure endosperm, no chalazal'
AT5G42990 UBC18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.59398 x 10-1 127 31 67 59 80.38% 46.83% 158 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '118.187'
Avg. expression score in LCM sample: '24.3985'
Tissue used: 'full endosperm'
AT5G42990 UBC18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.08215 x 10-1 92 48 24 11 65.71% 31.43% 140 35 TAIR8 Avg. embryo expression (dissected): '99.3703'
Avg. embryo expression (LCM): '93.0214'
AT5G42990 UBC18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.0075 x 10-1 20 12 62.50% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42990 UBC18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0 x 10-7 45 1 97.83% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42990 UBC18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-11 115 7 94.26% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42980 TRX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.5603 x 10-2 1003 450 578 842 69.03% 59.30% 1453 1420 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.0e-06'
Avg. expression score for this sample: '1273.3'
Avg. expression score in LCM sample: '371.049'
Tissue used: 'pure endosperm, no chalazal'
AT5G42980 TRX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2 x 10-13 1559 776 603 2218 66.77% 78.62% 2335 2821 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.0e-06'
Avg. expression score for this sample: '1959.27'
Avg. expression score in LCM sample: '371.049'
Tissue used: 'full endosperm'
AT5G42980 TRX3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.7659 x 10-2 782 612 142 110 56.10% 43.65% 1394 252 TAIR8 Avg. embryo expression (dissected): '1028.65'
Avg. embryo expression (LCM): '882.454'
AT5G42980 TRX3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8 x 10-6 661 191 77.58% 852 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42980 TRX3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5 x 10-9 2015 642 75.84% 2657 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42980 TRX3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-28 2308 557 80.56% 2865 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42970 COP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.81552 x 10-1 523 187 193 334 73.66% 63.38% 710 527 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000082'
Avg. expression score for this sample: '365.956'
Avg. expression score in LCM sample: '276.174'
Tissue used: 'pure endosperm, no chalazal'
AT5G42970 COP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-5 340 104 136 406 76.58% 74.91% 444 542 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000082'
Avg. expression score for this sample: '205.758'
Avg. expression score in LCM sample: '276.174'
Tissue used: 'full endosperm'
AT5G42970 COP8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.378 x 10-3 239 147 47 50 61.92% 51.55% 386 97 TAIR8 Avg. embryo expression (dissected): '247.263'
Avg. embryo expression (LCM): '249.577'
AT5G42970 COP8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 102 39 72.34% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42970 COP8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.44149 x 10-1 2993 1060 73.85% 4053 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42970 COP8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-5 1568 794 66.38% 2362 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42965 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '19.1894'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42965 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '71.3472'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42965 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.5866'
Avg. embryo expression (LCM): '9.68266'
AT5G42965 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42965 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42965 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.61161 x 10-1 32 23 15 31 58.18% 67.39% 55 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.83235'
Avg. expression score for this sample: '54.581'
Avg. expression score in LCM sample: '26.809'
Tissue used: 'pure endosperm, no chalazal'
AT5G42960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.79016 x 10-1 22 15 16 45 59.46% 73.77% 37 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.83235'
Avg. expression score for this sample: '50.6561'
Avg. expression score in LCM sample: '26.809'
Tissue used: 'full endosperm'
AT5G42960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.03517 x 10-1 52 41 9 10 55.91% 52.63% 93 19 TAIR8 Avg. embryo expression (dissected): '103.716'
Avg. embryo expression (LCM): '113.19'
AT5G42960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.05905 x 10-1 7 9 43.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.52986 x 10-1 29 10 74.36% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-6 51 2 96.23% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42957 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.48014'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42957 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.514'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42957 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G42957 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42957 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42957 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42955 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G42955 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.00295'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G42955 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.602327'
Avg. embryo expression (LCM): '0'
AT5G42955 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42955 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42955 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 12 3 23 36.84% 88.46% 19 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.039481'
Avg. expression score for this sample: '173.365'
Avg. expression score in LCM sample: '137.102'
Tissue used: 'pure endosperm, no chalazal'
AT5G42950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5313 x 10-2 29 22 19 115 56.86% 85.82% 51 134 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.039481'
Avg. expression score for this sample: '202.715'
Avg. expression score in LCM sample: '137.102'
Tissue used: 'full endosperm'
AT5G42950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.0759 x 10-2 4 26 4 9 13.33% 69.23% 30 13 TAIR8 Avg. embryo expression (dissected): '252.588'
Avg. embryo expression (LCM): '190.25'
AT5G42950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.4048 x 10-2 18 1 94.74% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.14887 x 10-1 186 47 79.83% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.91502 x 10-1 92 27 77.31% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.34233 x 10-1 100 26 41 72 79.37% 63.72% 126 113 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004486'
Avg. expression score for this sample: '243.067'
Avg. expression score in LCM sample: '220.616'
Tissue used: 'pure endosperm, no chalazal'
AT5G42940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.776 x 10-3 141 39 73 191 78.33% 72.35% 180 264 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004486'
Avg. expression score for this sample: '329.494'
Avg. expression score in LCM sample: '220.616'
Tissue used: 'full endosperm'
AT5G42940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.50639 x 10-1 29 16 7 6 64.44% 46.15% 45 13 TAIR8 Avg. embryo expression (dissected): '141.652'
Avg. embryo expression (LCM): '118.591'
AT5G42940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 22 8 73.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.4808 x 10-1 407 143 74.00% 550 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9458 x 10-2 370 93 79.91% 463 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.2 x 10-26 90 0 0 133 100.00% 100.00% 90 133 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '87.0665'
Avg. expression score in LCM sample: '1.30811'
Tissue used: 'pure endosperm, no chalazal'
AT5G42930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 163 2 4 579 98.79% 99.31% 165 583 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '161.667'
Avg. expression score in LCM sample: '1.30811'
Tissue used: 'full endosperm'
AT5G42930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.43 x 10-4 16 1 0 10 94.12% 100.00% 17 10 TAIR8 Avg. embryo expression (dissected): '16.966'
Avg. embryo expression (LCM): '0'
AT5G42930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 89 0 100.00% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1101 x 10-2 4447 10 99.78% 4457 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.76156 x 10-1 1564 7 99.55% 1571 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42920 THO5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.88105 x 10-1 160 77 71 168 67.51% 70.29% 237 239 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000362'
Avg. expression score for this sample: '83.3274'
Avg. expression score in LCM sample: '67.1989'
Tissue used: 'pure endosperm, no chalazal'
AT5G42920 THO5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.51 x 10-4 306 132 152 508 69.86% 76.97% 438 660 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000362'
Avg. expression score for this sample: '115.525'
Avg. expression score in LCM sample: '67.1989'
Tissue used: 'full endosperm'
AT5G42920 THO5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.44455 x 10-1 165 212 61 60 43.77% 49.59% 377 121 TAIR8 Avg. embryo expression (dissected): '118.413'
Avg. embryo expression (LCM): '124.656'
AT5G42920 THO5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.584 x 10-3 80 13 86.02% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42920 THO5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8 x 10-8 760 164 82.25% 924 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42920 THO5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2 x 10-10 684 133 83.72% 817 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G42910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 2 50.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.71546'
Avg. expression score in LCM sample: '7.11379'
Tissue used: 'pure endosperm, no chalazal'
AT5G42910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.12521'
Avg. expression score in LCM sample: '7.11379'
Tissue used: 'full endosperm'