Displaying data sets 16501 - 16600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G43185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.453454'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43185 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G43185 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43185 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43185 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.9681 x 10-2 13 1 0 5 92.86% 100.00% 14 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-06'
Avg. expression score for this sample: '43.0956'
Avg. expression score in LCM sample: '5.07078'
Tissue used: 'pure endosperm, no chalazal'
AT5G43180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1 x 10-5 18 0 0 20 100.00% 100.00% 18 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-06'
Avg. expression score for this sample: '51.1155'
Avg. expression score in LCM sample: '5.07078'
Tissue used: 'full endosperm'
AT5G43180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.90407'
Avg. embryo expression (LCM): '0'
AT5G43180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.35024 x 10-1 370 3 99.20% 373 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43175 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G43175 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43175 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43175 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43170 ZF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.81504 x 10-1 16 2 10 0 88.89% 0.00% 18 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.8046'
Avg. expression score in LCM sample: '8.39251'
Tissue used: 'pure endosperm, no chalazal'
AT5G43170 ZF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.84973 x 10-1 23 0 8 1 100.00% 11.11% 23 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.7208'
Avg. expression score in LCM sample: '8.39251'
Tissue used: 'full endosperm'
AT5G43170 ZF3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.5846 x 10-2 15 0 4 0 100.00% 0.00% 15 4 TAIR8 Avg. embryo expression (dissected): '20.1452'
Avg. embryo expression (LCM): '8.95427'
AT5G43170 ZF3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.021 x 10-3 0 7 0.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43170 ZF3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.12824 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43170 ZF3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-7 74 1 98.67% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43160 QWRF9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 15 2 17 58.33% 89.47% 36 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.28302'
Avg. expression score for this sample: '8.69911'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'pure endosperm, no chalazal'
AT5G43160 QWRF9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.12728 x 10-1 47 11 7 13 81.03% 65.00% 58 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.28302'
Avg. expression score for this sample: '13.4189'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'full endosperm'
AT5G43160 QWRF9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.94796 x 10-1 8 17 12 7 32.00% 36.84% 25 19 TAIR8 Avg. embryo expression (dissected): '17.2676'
Avg. embryo expression (LCM): '15.0703'
AT5G43160 QWRF9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.4434 x 10-2 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43160 QWRF9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.79243 x 10-1 6 5 54.55% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43160 QWRF9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8 x 10-6 51 0 100.00% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.826 x 10-2 98 6 97 48 94.23% 33.10% 104 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.900853'
Avg. expression score for this sample: '187.017'
Avg. expression score in LCM sample: '123.551'
Tissue used: 'pure endosperm, no chalazal'
AT5G43150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.2402 x 10-2 201 42 46 44 82.72% 48.89% 243 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.900853'
Avg. expression score for this sample: '222.526'
Avg. expression score in LCM sample: '123.551'
Tissue used: 'full endosperm'
AT5G43150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 1 1 60.00% 50.00% 5 2 TAIR8 Avg. embryo expression (dissected): '11.0947'
Avg. embryo expression (LCM): '2.19775'
AT5G43150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.40041 x 10-1 67 29 69.79% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.0 x 10-5 34 1 97.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-13 82 0 100.00% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.31218 x 10-1 23 6 12 7 79.31% 36.84% 29 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272214'
Avg. expression score for this sample: '26.3472'
Avg. expression score in LCM sample: '21.2091'
Tissue used: 'pure endosperm, no chalazal'
AT5G43140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.00017 x 10-1 48 6 19 39 88.89% 67.24% 54 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272214'
Avg. expression score for this sample: '45.3838'
Avg. expression score in LCM sample: '21.2091'
Tissue used: 'full endosperm'
AT5G43140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.11838 x 10-1 18 23 5 1 43.90% 16.67% 41 6 TAIR8 Avg. embryo expression (dissected): '42.9232'
Avg. embryo expression (LCM): '46.6049'
AT5G43140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.29743 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2245 x 10-1 28 7 80.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.963 x 10-3 68 8 89.47% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43130 TAF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.35208 x 10-1 155 66 80 205 70.14% 71.93% 221 285 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-07'
Avg. expression score for this sample: '140.175'
Avg. expression score in LCM sample: '127.74'
Tissue used: 'pure endosperm, no chalazal'
AT5G43130 TAF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-8 305 60 105 321 83.56% 75.35% 365 426 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-07'
Avg. expression score for this sample: '173.835'
Avg. expression score in LCM sample: '127.74'
Tissue used: 'full endosperm'
AT5G43130 TAF4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.70496 x 10-1 124 126 66 59 49.60% 47.20% 250 125 TAIR8 Avg. embryo expression (dissected): '154.727'
Avg. embryo expression (LCM): '153.943'
AT5G43130 TAF4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.5544 x 10-2 93 17 84.55% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43130 TAF4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.31603 x 10-1 443 120 78.69% 563 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43130 TAF4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2 x 10-22 690 58 92.25% 748 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.292706'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.81179'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.843074'
Avg. embryo expression (LCM): '0'
AT5G43120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43110 PUM14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485714'
Avg. expression score for this sample: '.500917'
Avg. expression score in LCM sample: '.940667'
Tissue used: 'pure endosperm, no chalazal'
AT5G43110 PUM14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.85714 x 10-1 1 2 1 0 33.33% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485714'
Avg. expression score for this sample: '.439635'
Avg. expression score in LCM sample: '.940667'
Tissue used: 'full endosperm'
AT5G43110 PUM14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G43110 PUM14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43110 PUM14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2399 x 10-2 27 3 90.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43110 PUM14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.61538 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3 x 10-9 311 144 109 589 68.35% 84.38% 455 698 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '182.722'
Avg. expression score in LCM sample: '128.019'
Tissue used: 'pure endosperm, no chalazal'
AT5G43100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 558 198 180 1206 73.81% 87.01% 756 1386 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '280.879'
Avg. expression score in LCM sample: '128.019'
Tissue used: 'full endosperm'
AT5G43100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14816 x 10-1 219 229 63 119 48.88% 65.38% 448 182 TAIR8 Avg. embryo expression (dissected): '169.106'
Avg. embryo expression (LCM): '87.6212'
AT5G43100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2 x 10-6 298 29 91.13% 327 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5 x 10-22 2661 311 89.54% 2972 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.46 x 10-3 1627 302 84.34% 1929 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43090 PUM13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 9 1 1 0 90.00% 0.00% 10 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.83878'
Avg. expression score in LCM sample: '66.0965'
Tissue used: 'pure endosperm, no chalazal'
AT5G43090 PUM13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.51317 x 10-1 7 2 7 5 77.78% 41.67% 9 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.90654'
Avg. expression score in LCM sample: '66.0965'
Tissue used: 'full endosperm'
AT5G43090 PUM13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '.367728'
Avg. embryo expression (LCM): '0'
AT5G43090 PUM13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43090 PUM13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.526 x 10-3 247 348 41.51% 595 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43090 PUM13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.92854 x 10-1 143 44 76.47% 187 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43080 CYCA3;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 7 1 6 50.00% 85.71% 14 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485393'
Avg. expression score for this sample: '5.34764'
Avg. expression score in LCM sample: '8.31902'
Tissue used: 'pure endosperm, no chalazal'
AT5G43080 CYCA3;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.99792 x 10-1 0 3 6 9 0.00% 60.00% 3 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.485393'
Avg. expression score for this sample: '3.54347'
Avg. expression score in LCM sample: '8.31902'
Tissue used: 'full endosperm'
AT5G43080 CYCA3;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02478 x 10-1 11 16 2 3 40.74% 60.00% 27 5 TAIR8 Avg. embryo expression (dissected): '13.7869'
Avg. embryo expression (LCM): '35.5157'
AT5G43080 CYCA3;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43080 CYCA3;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.29071 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43080 CYCA3;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.22672 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43070 WPP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 46 13 19 20 77.97% 51.28% 59 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.472055'
Avg. expression score for this sample: '41.593'
Avg. expression score in LCM sample: '34.79'
Tissue used: 'pure endosperm, no chalazal'
AT5G43070 WPP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.29642 x 10-1 54 13 20 35 80.60% 63.64% 67 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.472055'
Avg. expression score for this sample: '33.095'
Avg. expression score in LCM sample: '34.79'
Tissue used: 'full endosperm'
AT5G43070 WPP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.20656 x 10-1 51 30 12 6 62.96% 33.33% 81 18 TAIR8 Avg. embryo expression (dissected): '54.7965'
Avg. embryo expression (LCM): '152.336'
AT5G43070 WPP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.7472 x 10-2 5 6 45.45% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43070 WPP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.46411 x 10-1 27 8 77.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43070 WPP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-7 46 0 100.00% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43066 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43066 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43066 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G43066 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43066 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43066 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43060 RD21B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.9 x 10-11 1438 239 588 947 85.75% 61.69% 1677 1535 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '902.058'
Avg. expression score in LCM sample: '431.237'
Tissue used: 'pure endosperm, no chalazal'
AT5G43060 RD21B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1817 125 215 1656 93.56% 88.51% 1942 1871 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '834.223'
Avg. expression score in LCM sample: '431.237'
Tissue used: 'full endosperm'
AT5G43060 RD21B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.59465 x 10-1 300 310 81 77 49.18% 48.73% 610 158 TAIR8 Avg. embryo expression (dissected): '283.207'
Avg. embryo expression (LCM): '162.948'
AT5G43060 RD21B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9 x 10-9 706 69 91.10% 775 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43060 RD21B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3 x 10-13 5544 1510 78.59% 7054 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43060 RD21B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-6 4266 657 86.65% 4923 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43050 NPQ6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.67316 x 10-1 82 41 47 72 66.67% 60.50% 123 119 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '126.194'
Avg. expression score in LCM sample: '76.2381'
Tissue used: 'pure endosperm, no chalazal'
AT5G43050 NPQ6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.4594 x 10-1 68 34 35 90 66.67% 72.00% 102 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '116.223'
Avg. expression score in LCM sample: '76.2381'
Tissue used: 'full endosperm'
AT5G43050 NPQ6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.7292 x 10-2 110 63 18 15 63.58% 45.45% 173 33 TAIR8 Avg. embryo expression (dissected): '165.854'
Avg. embryo expression (LCM): '133.912'
AT5G43050 NPQ6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 6 68.42% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'