| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G06730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '41.6269' Avg. expression score in LCM sample: '31.4535' Tissue used: 'full endosperm' |
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| AT1G06720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.47273 x 10-1 | 62 | 26 | 42 | 62 | 70.45% | 59.62% | 88 | 104 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.707521' Avg. expression score for this sample: '253.166' Avg. expression score in LCM sample: '27.8672' Tissue used: 'full endosperm' |
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| AT1G06720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 5 | 64.29% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 22 | 9 | 12 | 17 | 70.97% | 58.62% | 31 | 29 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.707521' Avg. expression score for this sample: '105.922' Avg. expression score in LCM sample: '27.8672' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G06720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.11976 x 10-1 | 122 | 47 | 72.19% | 169 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.75576 x 10-1 | 51 | 35 | 9 | 13 | 59.30% | 59.09% | 86 | 22 | TAIR8 |
Avg. embryo expression (dissected): '267.225' Avg. embryo expression (LCM): '421.73' |
||||
| AT1G06720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.6 x 10-6 | 169 | 32 | 84.08% | 201 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 4 | 73.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.00323 x 10-1 | 6 | 0 | 3 | 2 | 100.00% | 40.00% | 6 | 5 | TAIR8 |
Avg. embryo expression (dissected): '25.8976' Avg. embryo expression (LCM): '30.9569' |
||||
| AT1G06710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 2 | 2 | 5 | 60.00% | 71.43% | 5 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '10.6769' Avg. expression score in LCM sample: '4.14481' Tissue used: 'full endosperm' |
|||||
| AT1G06710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.84035 x 10-1 | 10 | 9 | 52.63% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.0827' Avg. expression score in LCM sample: '4.14481' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G06700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 4 | 3 | 5 | 71.43% | 62.50% | 14 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.175115' Avg. expression score for this sample: '81.2152' Avg. expression score in LCM sample: '51.9718' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G06700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.72651 x 10-1 | 67 | 31 | 68.37% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.54117 x 10-1 | 16 | 16 | 1 | 7 | 50.00% | 87.50% | 32 | 8 | TAIR8 |
Avg. embryo expression (dissected): '179.719' Avg. embryo expression (LCM): '115.137' |
||||
| AT1G06700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.40966 x 10-1 | 52 | 21 | 71.23% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.1768 | 41 | 10 | 16 | 39 | 80.39% | 70.91% | 51 | 55 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.175115' Avg. expression score for this sample: '143.594' Avg. expression score in LCM sample: '51.9718' Tissue used: 'full endosperm' |
|||||
| AT1G06700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.57957 x 10-1 | 14 | 2 | 87.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.3787 x 10-2 | 1 | 4 | 20.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 15 | 0 | 9 | 6 | 100.00% | 40.00% | 15 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.644334' Avg. expression score for this sample: '25.0074' Avg. expression score in LCM sample: '27.7056' Tissue used: 'full endosperm' |
|||||
| AT1G06690 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.27447 x 10-1 | 5 | 4 | 55.56% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06690 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.77617 x 10-1 | 9 | 0 | 3 | 2 | 100.00% | 40.00% | 9 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.644334' Avg. expression score for this sample: '19.8256' Avg. expression score in LCM sample: '27.7056' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G06690 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.46696 x 10-1 | 11 | 6 | 64.71% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06690 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.81251 x 10-1 | 13 | 6 | 5 | 2 | 68.42% | 28.57% | 19 | 7 | TAIR8 |
Avg. embryo expression (dissected): '39.7368' Avg. embryo expression (LCM): '25.4939' |
||||
| AT1G06680 | PSBP-1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4390.35' Avg. embryo expression (LCM): '1380' |
|||||
| AT1G06680 | PSBP-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06680 | PSBP-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1098.05' Avg. expression score in LCM sample: '828.948' Tissue used: 'full endosperm' |
||||||
| AT1G06680 | PSBP-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06680 | PSBP-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2063.26' Avg. expression score in LCM sample: '828.948' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G06680 | PSBP-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06670 | NIH | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.7 x 10-5 | 48 | 3 | 94.12% | 51 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G06670 | NIH | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.66331 x 10-1 | 33 | 20 | 8 | 44 | 62.26% | 84.62% | 53 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.706963' Avg. expression score for this sample: '223.383' Avg. expression score in LCM sample: '108.294' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G06670 | NIH | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.28 x 10-4 | 53 | 6 | 89.83% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G06670 | NIH | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.95177 x 10-1 | 50 | 68 | 8 | 10 | 42.37% | 55.56% | 118 | 18 | TAIR8 |
Avg. embryo expression (dissected): '369.006' Avg. embryo expression (LCM): '384.104' |
|||
| AT1G06670 | NIH | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.4322 x 10-2 | 6 | 8 | 42.86% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G06670 | NIH | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.04135 x 10-1 | 32 | 16 | 37 | 69 | 66.67% | 65.09% | 48 | 106 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.706963' Avg. expression score for this sample: '284.11' Avg. expression score in LCM sample: '108.294' Tissue used: 'full endosperm' |
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| AT1G06660 | JASON | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 3 | 2 | 6 | 25.00% | 75.00% | 4 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '47.4574' Avg. expression score in LCM sample: '129.812' Tissue used: 'full endosperm' |
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| AT1G06660 | JASON | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G06660 | JASON | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 1 | 3 | 4 | 80.00% | 57.14% | 5 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '167.041' Avg. expression score in LCM sample: '129.812' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G06660 | JASON | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.78643 x 10-1 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G06660 | JASON | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 4 | 2 | 3 | 20.00% | 60.00% | 5 | 5 | TAIR8 |
Avg. embryo expression (dissected): '229.429' Avg. embryo expression (LCM): '124.317' |
|||
| AT1G06660 | JASON | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.4 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G06650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '14.9232' Avg. embryo expression (LCM): '6.85698' |
||||||
| AT1G06650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '20.1718' Avg. expression score in LCM sample: '5.73219' Tissue used: 'full endosperm' |
|||||||
| AT1G06650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '12.0583' Avg. expression score in LCM sample: '5.73219' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G06640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 30 | 0 | 14 | 0 | 100.00% | 0.00% | 30 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004409' Avg. expression score for this sample: '40.2144' Avg. expression score in LCM sample: '26.662' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G06640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.616 x 10-3 | 19 | 16 | 54.29% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.277 x 10-2 | 20 | 0 | 6 | 0 | 100.00% | 0.00% | 20 | 6 | TAIR8 |
Avg. embryo expression (dissected): '22.1922' Avg. embryo expression (LCM): '4.55876' |
||||
| AT1G06640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.9 x 10-13 | 193 | 0 | 100.00% | 193 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.142 x 10-3 | 122 | 5 | 21 | 2 | 96.06% | 8.70% | 127 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004409' Avg. expression score for this sample: '83.148' Avg. expression score in LCM sample: '26.662' Tissue used: 'full endosperm' |
|||||
| AT1G06640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.397 x 10-3 | 1 | 5 | 16.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.07633 x 10-1 | 58 | 19 | 75.32% | 77 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.2592 x 10-2 | 133 | 45 | 55 | 156 | 74.72% | 73.93% | 178 | 211 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.06958' Avg. expression score for this sample: '123.833' Avg. expression score in LCM sample: '73.7394' Tissue used: 'full endosperm' |
|||||
| AT1G06630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.56563 x 10-1 | 169 | 61 | 73.48% | 230 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.05955 x 10-1 | 99 | 50 | 59 | 130 | 66.44% | 68.78% | 149 | 189 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.06958' Avg. expression score for this sample: '138.719' Avg. expression score in LCM sample: '73.7394' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G06630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.5 x 10-15 | 261 | 21 | 92.55% | 282 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.31803 x 10-1 | 87 | 51 | 21 | 15 | 63.04% | 41.67% | 138 | 36 | TAIR8 |
Avg. embryo expression (dissected): '127.974' Avg. embryo expression (LCM): '50.0585' |
||||
| AT1G06620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.80276' Avg. embryo expression (LCM): '0' |
||||||
| AT1G06620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.129658' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G06620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G06620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G06610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G06610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G06610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G06590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.74625 x 10-1 | 12 | 1 | 5 | 19 | 92.31% | 79.17% | 13 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.15827' Avg. expression score for this sample: '23.5507' Avg. expression score in LCM sample: '39.5521' Tissue used: 'full endosperm' |
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| AT1G06590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.77453 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 6 | 1 | 10 | 57.14% | 90.91% | 14 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.15827' Avg. expression score for this sample: '47.4792' Avg. expression score in LCM sample: '39.5521' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G06590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.68257 x 10-1 | 22 | 4 | 84.62% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06590 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 8 | 9 | 2 | 5 | 47.06% | 71.43% | 17 | 7 | TAIR8 |
Avg. embryo expression (dissected): '90.7189' Avg. embryo expression (LCM): '107.501' |
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| AT1G06590 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.504 x 10-3 | 7 | 11 | 38.89% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.1 x 10-11 | 120 | 3 | 97.56% | 123 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.6553 x 10-2 | 34 | 15 | 3 | 5 | 69.39% | 62.50% | 49 | 8 | TAIR8 |
Avg. embryo expression (dissected): '40.0412' Avg. embryo expression (LCM): '22.6557' |
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| AT1G06580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.09714 x 10-1 | 5 | 6 | 45.45% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.89533 x 10-1 | 48 | 10 | 30 | 40 | 82.76% | 57.14% | 58 | 70 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.661858' Avg. expression score for this sample: '42.2025' Avg. expression score in LCM sample: '12.9048' Tissue used: 'full endosperm' |
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| AT1G06580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.42152 x 10-1 | 42 | 22 | 65.62% | 64 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.48931 x 10-1 | 29 | 6 | 13 | 16 | 82.86% | 55.17% | 35 | 29 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.661858' Avg. expression score for this sample: '30.355' Avg. expression score in LCM sample: '12.9048' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G06570 | PDS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '146.441' Avg. expression score in LCM sample: '31.2478' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G06570 | PDS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06570 | PDS1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '137.09' Avg. embryo expression (LCM): '67.1633' |
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| AT1G06570 | PDS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06570 | PDS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '357.945' Avg. expression score in LCM sample: '31.2478' Tissue used: 'full endosperm' |
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| AT1G06570 | PDS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.334 x 10-3 | 4 | 9 | 30.77% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.68428 x 10-1 | 81 | 25 | 76.42% | 106 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.12876 x 10-1 | 83 | 21 | 26 | 22 | 79.81% | 45.83% | 104 | 48 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.049174' Avg. expression score for this sample: '57.399' Avg. expression score in LCM sample: '137.132' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G06560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.9603 x 10-2 | 121 | 27 | 57 | 123 | 81.76% | 68.33% | 148 | 180 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.049174' Avg. expression score for this sample: '57.0095' Avg. expression score in LCM sample: '137.132' Tissue used: 'full endosperm' |
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| AT1G06560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 82 | 31 | 72.57% | 113 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G06560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.12792 x 10-1 | 63 | 45 | 13 | 4 | 58.33% | 23.53% | 108 | 17 | TAIR8 |
Avg. embryo expression (dissected): '64.1126' Avg. embryo expression (LCM): '88.5003' |
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| AT1G06550 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.88877 x 10-1 | 16 | 9 | 1 | 3 | 64.00% | 75.00% | 25 | 4 | TAIR8 |
Avg. embryo expression (dissected): '53.6504' Avg. embryo expression (LCM): '43.0508' |
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| AT1G06550 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.097 x 10-3 | 268 | 8 | 97.10% | 276 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |