Displaying data sets 165301 - 165400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G07340 STP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.215262'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G07340 STP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07340 STP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G07340 STP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07340 STP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.172708'
Avg. embryo expression (LCM): '0'
AT1G07340 STP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.35184'
Avg. embryo expression (LCM): '1.21818'
AT1G07330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 0 2 66.67% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.87742'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G07330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.749019'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G07320 RPL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1700.93'
Avg. expression score in LCM sample: '469.055'
Tissue used: 'pure endosperm, no chalazal'
AT1G07320 RPL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5620.28'
Avg. embryo expression (LCM): '2963.99'
AT1G07320 RPL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07320 RPL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07320 RPL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1141.77'
Avg. expression score in LCM sample: '469.055'
Tissue used: 'full endosperm'
AT1G07320 RPL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 206 413 33.28% 619 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.23258 x 10-1 494 35 286 157 93.38% 35.44% 529 443 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006435'
Avg. expression score for this sample: '900.358'
Avg. expression score in LCM sample: '726.797'
Tissue used: 'full endosperm'
AT1G07310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.8 x 10-5 357 30 308 76 92.25% 19.79% 387 384 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006435'
Avg. expression score for this sample: '1265.41'
Avg. expression score in LCM sample: '726.797'
Tissue used: 'pure endosperm, no chalazal'
AT1G07310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.9 x 10-12 50 103 32.68% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.0775 x 10-1 140 37 100 15 79.10% 13.04% 177 115 TAIR8 Avg. embryo expression (dissected): '806.749'
Avg. embryo expression (LCM): '332.124'
AT1G07310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 702 43 94.23% 745 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-6 39 1 97.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.92569 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 3 0 71.43% 0.00% 7 3 TAIR8 Avg. embryo expression (dissected): '33.4078'
Avg. embryo expression (LCM): '10.2604'
AT1G07300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.85393 x 10-1 12 10 7 10 54.55% 58.82% 22 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.347916'
Avg. expression score for this sample: '45.2884'
Avg. expression score in LCM sample: '6.01145'
Tissue used: 'full endosperm'
AT1G07300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.51317 x 10-1 9 3 6 3 75.00% 33.33% 12 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.347916'
Avg. expression score for this sample: '36.621'
Avg. expression score in LCM sample: '6.01145'
Tissue used: 'pure endosperm, no chalazal'
AT1G07290 GONST2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.5066'
Avg. expression score in LCM sample: '24.7072'
Tissue used: 'pure endosperm, no chalazal'
AT1G07290 GONST2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.40679'
Avg. embryo expression (LCM): '2.34845'
AT1G07290 GONST2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07290 GONST2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07290 GONST2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07290 GONST2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.94203'
Avg. expression score in LCM sample: '24.7072'
Tissue used: 'full endosperm'
AT1G07280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 704 238 222 1281 74.73% 85.23% 942 1503 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-30'
Avg. expression score for this sample: '396.663'
Avg. expression score in LCM sample: '62.6866'
Tissue used: 'full endosperm'
AT1G07280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1302 9 99.31% 1311 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.11 x 10-4 294 124 144 453 70.33% 75.88% 418 597 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-30'
Avg. expression score for this sample: '209.839'
Avg. expression score in LCM sample: '62.6866'
Tissue used: 'pure endosperm, no chalazal'
AT1G07280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.62 x 10-4 393 66 85.62% 459 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.81866 x 10-1 20 8 8 7 71.43% 46.67% 28 15 TAIR8 Avg. embryo expression (dissected): '11.828'
Avg. embryo expression (LCM): '3.01406'
AT1G07280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1537 5 99.68% 1542 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.64663'
Avg. embryo expression (LCM): '8.36401'
AT1G07270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.667625'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'full endosperm'
AT1G07270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.03791'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'pure endosperm, no chalazal'
AT1G07260 UGT71C3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 4 6 6 71.43% 50.00% 14 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '188.427'
Avg. expression score in LCM sample: '70.7264'
Tissue used: 'pure endosperm, no chalazal'
AT1G07260 UGT71C3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 1 2 0 80.00% 0.00% 5 2 TAIR8 Avg. embryo expression (dissected): '45.2522'
Avg. embryo expression (LCM): '11.6544'
AT1G07260 UGT71C3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.87614 x 10-1 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07260 UGT71C3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.47619 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07260 UGT71C3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 0 9 13 100.00% 59.09% 7 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '65.1083'
Avg. expression score in LCM sample: '70.7264'
Tissue used: 'full endosperm'
AT1G07260 UGT71C3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.31579 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07250 UGT71C4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.01171 x 10-1 1409 118 92.27% 1527 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07250 UGT71C4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1094 27 65 634 97.59% 90.70% 1121 699 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '392.178'
Avg. expression score in LCM sample: '65.2881'
Tissue used: 'full endosperm'
AT1G07250 UGT71C4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.1 x 10-29 588 61 42 213 90.60% 83.53% 649 255 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '321.796'
Avg. expression score in LCM sample: '65.2881'
Tissue used: 'pure endosperm, no chalazal'
AT1G07250 UGT71C4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.1 x 10-8 461 6 98.72% 467 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07250 UGT71C4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.1 x 10-5 385 215 87 84 64.17% 49.12% 600 171 TAIR8 Avg. embryo expression (dissected): '373.624'
Avg. embryo expression (LCM): '223.128'
AT1G07250 UGT71C4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-7 3063 130 95.93% 3193 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07240 UGT71C5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07240 UGT71C5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.03406 x 10-1 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07240 UGT71C5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.88383'
Avg. embryo expression (LCM): '.715839'
AT1G07240 UGT71C5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 5 7 66.67% 58.33% 3 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '62.1535'
Avg. expression score in LCM sample: '16.6968'
Tissue used: 'full endosperm'
AT1G07240 UGT71C5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.58824 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07240 UGT71C5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '51.452'
Avg. expression score in LCM sample: '16.6968'
Tissue used: 'pure endosperm, no chalazal'
AT1G07230 NPC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 2.8117 x 10-2 51 14 14 53 78.46% 79.10% 65 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-09'
Avg. expression score for this sample: '58.8413'
Avg. expression score in LCM sample: '33.5553'
Tissue used: 'pure endosperm, no chalazal'
AT1G07230 NPC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.2282 x 10-2 35 16 5 8 68.63% 61.54% 51 13 TAIR8 Avg. embryo expression (dissected): '34.6615'
Avg. embryo expression (LCM): '15.8615'
AT1G07230 NPC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-22 596 13 97.87% 609 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G07230 NPC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.43846 x 10-1 62 16 79.49% 78 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G07230 NPC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.3 x 10-8 356 25 93.44% 381 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G07230 NPC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 5.5 x 10-8 167 32 48 208 83.92% 81.25% 199 256 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-09'
Avg. expression score for this sample: '99.0621'
Avg. expression score in LCM sample: '33.5553'
Tissue used: 'full endosperm'
AT1G07220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.87368 x 10-1 7 6 2 18 53.85% 90.00% 13 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604715'
Avg. expression score for this sample: '14.0575'
Avg. expression score in LCM sample: '.837781'
Tissue used: 'full endosperm'
AT1G07220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2117 x 10-2 21 1 95.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604715'
Avg. expression score for this sample: '4.40788'
Avg. expression score in LCM sample: '.837781'
Tissue used: 'pure endosperm, no chalazal'
AT1G07220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.40071 x 10-1 2 7 3 2 22.22% 40.00% 9 5 TAIR8 Avg. embryo expression (dissected): '10.828'
Avg. embryo expression (LCM): '17.1299'
AT1G07220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.47471 x 10-1 18 4 81.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.04116 x 10-1 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.55184 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.08392 x 10-1 5 2 0 0 71.43% 7 0 TAIR8 Avg. embryo expression (dissected): '460.792'
Avg. embryo expression (LCM): '659.539'
AT1G07210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.90459 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.77617 x 10-1 5 1 2 6 83.33% 75.00% 6 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733718'
Avg. expression score for this sample: '526.57'
Avg. expression score in LCM sample: '103.576'
Tissue used: 'full endosperm'
AT1G07210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 2 60.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733718'
Avg. expression score for this sample: '179.442'
Avg. expression score in LCM sample: '103.576'
Tissue used: 'pure endosperm, no chalazal'
AT1G07200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 7 1 6 56.25% 85.71% 16 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.621949'
Avg. expression score for this sample: '24.0911'
Avg. expression score in LCM sample: '2.89549'
Tissue used: 'pure endosperm, no chalazal'
AT1G07200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.16301 x 10-1 13 13 4 7 50.00% 63.64% 26 11 TAIR8 Avg. embryo expression (dissected): '54.246'
Avg. embryo expression (LCM): '30.2411'
AT1G07200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5024 x 10-2 36 9 80.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.912 x 10-3 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.60513 x 10-1 19 15 8 15 55.88% 65.22% 34 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.621949'
Avg. expression score for this sample: '51.0415'
Avg. expression score in LCM sample: '2.89549'
Tissue used: 'full endosperm'
AT1G07200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.68646 x 10-1 23 8 74.19% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G07190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G07190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G07190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07180 NDA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-6 0 11 0.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07180 NDA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07180 NDA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '9.45165'
Avg. embryo expression (LCM): '4.93552'
AT1G07180 NDA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.11128 x 10-1 28 9 5 18 75.68% 78.26% 37 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232494'
Avg. expression score for this sample: '76.6946'
Avg. expression score in LCM sample: '4.13011'
Tissue used: 'full endosperm'