| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G133802 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.59 x 10-13 | 224 | 29 | 179 | 42 | 88.54% | 19.00% | 253 | 221 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.59e-13' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133802 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2414 | 1055 | 2607 | 946 | 69.59% | 26.63% | 3469 | 3553 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133793 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 11 | 11 | 9 | 8 | 50.00% | 47.06% | 22 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: '' |
||||
| GRMZM2G133793 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 2 | 2 | 100.00% | 50.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
|||||
| GRMZM2G133781 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.381507 x 10-1 | 40 | 50 | 66 | 152 | 44.44% | 69.72% | 90 | 218 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '.3381507' Biased in favor of strain: '' |
||||
| GRMZM2G133781 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.23546 x 10-2 | 20 | 7 | 31 | 12 | 74.07% | 27.91% | 27 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0123546' χ2 p-value for Mo17 x B73: '.0037618' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133764 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.09 x 10-11 | 2457 | 1603 | 2035 | 1624 | 60.52% | 44.38% | 4060 | 3659 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.09e-11' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133764 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.73 x 10-22 | 3359 | 1213 | 1712 | 2415 | 73.47% | 58.52% | 4572 | 4127 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.73e-22' χ2 p-value for Mo17 x B73: '1.17e-28' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133757 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.864761 x 10-1 | 14 | 1 | 10 | 14 | 93.33% | 58.33% | 15 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0284605' χ2 p-value for Mo17 x B73: '.3864761' Biased in favor of strain: '' |
||||
| GRMZM2G133757 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.553463 x 10-1 | 25 | 21 | 28 | 20 | 54.35% | 41.67% | 46 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5553463' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
||||
| GRMZM2G133756 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.44 x 10-5 | 642 | 469 | 485 | 359 | 57.79% | 42.54% | 1111 | 844 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.10e-07' χ2 p-value for Mo17 x B73: '.0000144' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133756 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.22 x 10-8 | 236 | 45 | 148 | 159 | 83.99% | 51.79% | 281 | 307 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.34e-10' χ2 p-value for Mo17 x B73: '3.22e-08' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133752 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999998 x 10-1 | 14 | 12 | 4 | 8 | 53.85% | 66.67% | 26 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655091' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: '' |
||||
| GRMZM2G133752 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.68274 x 10-2 | 66 | 37 | 45 | 25 | 64.08% | 35.71% | 103 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0042705' χ2 p-value for Mo17 x B73: '.0168274' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133749 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.32645 x 10-2 | 9 | 3 | 12 | 2 | 75.00% | 14.29% | 12 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: '' |
||||
| GRMZM2G133749 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 16 | 3 | 100.00% | 15.79% | 2 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '2.55e-06' Biased in favor of strain: '' |
|||||
| GRMZM2G133746 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 6 | 0 | 100.00% | 0.00% | 10 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
|||||
| GRMZM2G133746 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G133718 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.33 x 10-5 | 30 | 0 | 16 | 0 | 100.00% | 0.00% | 30 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133718 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5655 x 10-3 | 20 | 0 | 20 | 0 | 100.00% | 0.00% | 20 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015655' χ2 p-value for Mo17 x B73: '2.54e-10' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133716 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 6 | 66.67% | 85.71% | 3 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
|||||
| GRMZM2G133716 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.637029 x 10-1 | 65 | 52 | 40 | 35 | 55.56% | 46.67% | 117 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2294215' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
||||
| GRMZM2G133684 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.93 x 10-5 | 144 | 72 | 92 | 45 | 66.67% | 32.85% | 216 | 137 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.0000593' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133684 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.025876 x 10-1 | 31 | 24 | 10 | 22 | 56.36% | 68.75% | 55 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1050333' χ2 p-value for Mo17 x B73: '.8025876' Biased in favor of strain: '' |
||||
| GRMZM2G133675 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2339 x 10-3 | 93 | 22 | 43 | 28 | 80.87% | 39.44% | 115 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0012339' χ2 p-value for Mo17 x B73: '1.13e-06' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133675 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.92 x 10-8 | 138 | 56 | 60 | 14 | 71.13% | 18.92% | 194 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.93e-09' χ2 p-value for Mo17 x B73: '8.92e-08' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133660 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.06 x 10-19 | 1 | 82 | 3 | 93 | 1.20% | 96.88% | 83 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.06e-19' χ2 p-value for Mo17 x B73: '4.09e-20' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G133660 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999998 x 10-1 | 22 | 9 | 10 | 20 | 70.97% | 66.67% | 31 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6114703' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: '' |
||||
| GRMZM2G133657 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 0 | 2 | 6 | 100.00% | 75.00% | 11 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: '' |
|||||
| GRMZM2G133657 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G133653 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170751 x 10-1 | 32 | 26 | 34 | 30 | 55.17% | 46.88% | 58 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4307911' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: '' |
||||
| GRMZM2G133653 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.00263 x 10-2 | 25 | 22 | 17 | 97 | 53.19% | 85.09% | 47 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0500263' χ2 p-value for Mo17 x B73: '.0000302' Biased in favor of strain: '' |
||||
| GRMZM2G133652 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.557678 x 10-1 | 110 | 51 | 83 | 137 | 68.32% | 62.27% | 161 | 220 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6557678' χ2 p-value for Mo17 x B73: '.1668116' Biased in favor of strain: '' |
||||
| GRMZM2G133652 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.313639 x 10-1 | 190 | 130 | 143 | 135 | 59.38% | 48.56% | 320 | 278 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007962' χ2 p-value for Mo17 x B73: '.6313639' Biased in favor of strain: '' |
||||
| GRMZM2G133646 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.6252 x 10-3 | 54 | 16 | 41 | 17 | 77.14% | 29.31% | 70 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.58e-06' χ2 p-value for Mo17 x B73: '.0016252' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133646 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26777 x 10-1 | 99 | 32 | 34 | 80 | 75.57% | 70.18% | 131 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0305981' χ2 p-value for Mo17 x B73: '.426777' Biased in favor of strain: '' |
||||
| GRMZM2G133633 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.650229 x 10-1 | 40 | 31 | 27 | 47 | 56.34% | 63.51% | 71 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0648566' χ2 p-value for Mo17 x B73: '.5650229' Biased in favor of strain: '' |
||||
| GRMZM2G133633 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.701149 x 10-1 | 34 | 27 | 20 | 28 | 55.74% | 58.33% | 61 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3701149' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
||||
| GRMZM2G133631 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.373519 x 10-1 | 34 | 17 | 10 | 8 | 66.67% | 44.44% | 51 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0172903' χ2 p-value for Mo17 x B73: '.6373519' Biased in favor of strain: '' |
||||
| GRMZM2G133631 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.471598 x 10-1 | 70 | 48 | 33 | 51 | 59.32% | 60.71% | 118 | 84 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0905482' χ2 p-value for Mo17 x B73: '.2471598' Biased in favor of strain: '' |
||||
| GRMZM2G133621 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 3 | 66.67% | 75.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
|||||
| GRMZM2G133621 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 6 | 2 | 2 | 50.00% | 50.00% | 12 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
|||||
| GRMZM2G133620 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.927167 x 10-1 | 41 | 29 | 19 | 15 | 58.57% | 44.12% | 70 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.151494' χ2 p-value for Mo17 x B73: '.4927167' Biased in favor of strain: '' |
||||
| GRMZM2G133620 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.864556 x 10-1 | 33 | 21 | 28 | 36 | 61.11% | 56.25% | 54 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864556' χ2 p-value for Mo17 x B73: '.0770998' Biased in favor of strain: '' |
||||
| GRMZM2G133613 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.4268 x 10-3 | 39 | 6 | 34 | 16 | 86.67% | 32.00% | 45 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0044268' χ2 p-value for Mo17 x B73: '1.99e-07' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133613 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.81935 x 10-2 | 18 | 1 | 10 | 21 | 94.74% | 67.74% | 19 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000962' χ2 p-value for Mo17 x B73: '.0481935' Biased in favor of strain: '' |
||||
| GRMZM2G133566 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.05007 x 10-1 | 97 | 78 | 52 | 63 | 55.43% | 54.78% | 175 | 115 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1509269' χ2 p-value for Mo17 x B73: '.305007' Biased in favor of strain: '' |
||||
| GRMZM2G133566 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.324182 x 10-1 | 417 | 207 | 188 | 386 | 66.83% | 67.25% | 624 | 574 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9324182' χ2 p-value for Mo17 x B73: '.7678873' Biased in favor of strain: '' |
||||
| GRMZM2G133558 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 1 | 13 | 0.00% | 92.86% | 5 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015653' χ2 p-value for Mo17 x B73: '.0376353' Biased in favor of strain: '' |
|||||
| GRMZM2G133558 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.63512 x 10-2 | 10 | 24 | 6 | 36 | 29.41% | 85.71% | 34 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163512' χ2 p-value for Mo17 x B73: '3.67e-06' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G133552 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.655179 x 10-1 | 9 | 4 | 5 | 22 | 69.23% | 81.48% | 13 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.0010692' Biased in favor of strain: '' |
||||
| GRMZM2G133552 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G133512 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.07046 x 10-1 | 55 | 74 | 72 | 113 | 42.64% | 61.08% | 129 | 185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.04e-09' χ2 p-value for Mo17 x B73: '.107046' Biased in favor of strain: '' |
||||
| GRMZM2G133512 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.175791 x 10-1 | 28 | 41 | 7 | 24 | 40.58% | 77.42% | 69 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1175791' χ2 p-value for Mo17 x B73: '.0022635' Biased in favor of strain: '' |
||||
| GRMZM2G133464 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.26 x 10-5 | 261 | 179 | 243 | 143 | 59.32% | 37.05% | 440 | 386 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000926' χ2 p-value for Mo17 x B73: '3.58e-07' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133464 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06443 x 10-2 | 185 | 64 | 149 | 160 | 74.30% | 51.78% | 249 | 309 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0106443' χ2 p-value for Mo17 x B73: '2.84e-08' Biased in favor of strain: '' |
||||
| GRMZM2G133444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.330655 x 10-1 | 742 | 407 | 359 | 817 | 64.58% | 69.47% | 1149 | 1176 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1330655' χ2 p-value for Mo17 x B73: '.0412166' Biased in favor of strain: '' |
||||
| GRMZM2G133444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.067 x 10-4 | 383 | 283 | 268 | 182 | 57.51% | 40.44% | 666 | 450 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001067' χ2 p-value for Mo17 x B73: '.0000503' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133430 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.668543 x 10-1 | 44 | 10 | 10 | 7 | 81.48% | 41.18% | 54 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.71e-06' χ2 p-value for Mo17 x B73: '.4668543' Biased in favor of strain: '' |
||||
| GRMZM2G133430 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.54974 x 10-2 | 8 | 10 | 24 | 157 | 44.44% | 86.74% | 18 | 181 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454974' χ2 p-value for Mo17 x B73: '1.01e-08' Biased in favor of strain: '' |
||||
| GRMZM2G133421 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.572991 x 10-1 | 31 | 6 | 16 | 20 | 83.78% | 55.56% | 37 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0271967' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: '' |
||||
| GRMZM2G133421 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.980247 x 10-1 | 41 | 22 | 20 | 15 | 65.08% | 42.86% | 63 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.016676' χ2 p-value for Mo17 x B73: '.3980247' Biased in favor of strain: '' |
||||
| GRMZM2G133413 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.1 x 10-28 | 281 | 23 | 197 | 31 | 92.43% | 13.60% | 304 | 228 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.10e-28' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133413 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53478 x 10-2 | 10 | 0 | 11 | 1 | 100.00% | 8.33% | 10 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: '' |
||||
| GRMZM2G133407 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 370 | 1 | 463 | 64 | 99.73% | 12.14% | 371 | 527 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133407 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1108 | 73 | 1451 | 86 | 93.82% | 5.60% | 1181 | 1537 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133396 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1591 | 845 | 1610 | 995 | 65.31% | 38.20% | 2436 | 2605 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.95e-33' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133396 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 6.1219 x 10-3 | 872 | 508 | 845 | 1378 | 63.19% | 61.99% | 1380 | 2223 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0061219' χ2 p-value for Mo17 x B73: '2.88e-06' Biased in favor of strain: '' |
||||
| GRMZM2G133394 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
|||||
| GRMZM2G133394 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.7122 x 10-3 | 316 | 393 | 369 | 448 | 44.57% | 54.83% | 709 | 817 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0038305' χ2 p-value for Mo17 x B73: '.0057122' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G133382 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 1 | 38 | 30 | 87.50% | 44.12% | 8 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '.3319755' Biased in favor of strain: '' |
|||||
| GRMZM2G133382 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 44 | 27 | 38.03% | 0 | 71 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G133370 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.69 x 10-17 | 143 | 1 | 635 | 177 | 99.31% | 21.80% | 144 | 812 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.69e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133370 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8 x 10-29 | 170 | 3 | 320 | 92 | 98.27% | 22.33% | 173 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.16e-37' χ2 p-value for Mo17 x B73: '2.82e-29' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133331 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 5 | 4 | 6 | 37.50% | 60.00% | 8 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795001' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: '' |
|||||
| GRMZM2G133331 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 1 | 0 | 100.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
|||||
| GRMZM2G133314 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.852329 x 10-1 | 45 | 29 | 29 | 30 | 60.81% | 50.85% | 74 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2852329' χ2 p-value for Mo17 x B73: '.0099486' Biased in favor of strain: '' |
||||
| GRMZM2G133314 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.694171 x 10-1 | 118 | 86 | 75 | 73 | 57.84% | 49.32% | 204 | 148 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0250618' χ2 p-value for Mo17 x B73: '.8694171' Biased in favor of strain: '' |
||||
| GRMZM2G133311 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327676 x 10-1 | 3 | 15 | 15 | 11 | 16.67% | 42.31% | 18 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.4327676' Biased in favor of strain: '' |
||||
| GRMZM2G133311 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G133308 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.955327 x 10-1 | 14 | 2 | 10 | 19 | 87.50% | 65.52% | 16 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0771021' χ2 p-value for Mo17 x B73: '.8955327' Biased in favor of strain: '' |
||||
| GRMZM2G133308 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.112996 x 10-1 | 37 | 27 | 38 | 19 | 57.81% | 33.33% | 64 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2112996' χ2 p-value for Mo17 x B73: '.0118489' Biased in favor of strain: '' |
||||
| GRMZM2G133291 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482131 x 10-1 | 8 | 4 | 14 | 1 | 66.67% | 6.67% | 12 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2482131' χ2 p-value for Mo17 x B73: '.0007891' Biased in favor of strain: '' |
||||
| GRMZM2G133291 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G133282 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1541 x 10-3 | 30 | 2 | 19 | 8 | 93.75% | 29.63% | 32 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011541' χ2 p-value for Mo17 x B73: '.0000446' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133282 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.8409 x 10-3 | 86 | 54 | 96 | 62 | 61.43% | 39.24% | 140 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0068409' χ2 p-value for Mo17 x B73: '.0068326' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133226 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.935106 x 10-1 | 124 | 108 | 131 | 91 | 53.45% | 40.99% | 232 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2935106' χ2 p-value for Mo17 x B73: '.0072611' Biased in favor of strain: '' |
||||
| GRMZM2G133226 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.999341 x 10-1 | 52 | 110 | 46 | 115 | 32.10% | 71.43% | 162 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.03e-20' χ2 p-value for Mo17 x B73: '.1999341' Biased in favor of strain: '' |
||||
| GRMZM2G133203 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 842 | 100 | 327 | 140 | 89.38% | 29.98% | 942 | 467 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133203 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.83 x 10-11 | 390 | 199 | 259 | 127 | 66.21% | 32.90% | 589 | 386 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.55e-15' χ2 p-value for Mo17 x B73: '1.83e-11' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133189 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.513491 x 10-1 | 43 | 33 | 57 | 36 | 56.58% | 38.71% | 76 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2513491' χ2 p-value for Mo17 x B73: '.0294359' Biased in favor of strain: '' |
||||
| GRMZM2G133189 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.80133 x 10-1 | 58 | 30 | 30 | 57 | 65.91% | 65.52% | 88 | 87 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.880133' χ2 p-value for Mo17 x B73: '.8200895' Biased in favor of strain: '' |
||||
| GRMZM2G133169 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.164242 x 10-1 | 14 | 5 | 8 | 23 | 73.68% | 74.19% | 19 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5164242' χ2 p-value for Mo17 x B73: '.3740027' Biased in favor of strain: '' |
||||
| GRMZM2G133169 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.918648 x 10-1 | 182 | 177 | 153 | 171 | 50.70% | 52.78% | 359 | 324 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7918648' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
||||
| GRMZM2G133168 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 19 | 0 | 6 | 0.00% | 100.00% | 19 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
|||||
| GRMZM2G133168 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G133146 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G133146 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.77796 x 10-2 | 11 | 3 | 8 | 2 | 78.57% | 20.00% | 14 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325094' χ2 p-value for Mo17 x B73: '.0577796' Biased in favor of strain: '' |
||||
| GRMZM2G133121 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.65 x 10-7 | 411 | 274 | 415 | 247 | 60.00% | 37.31% | 685 | 662 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.65e-07' χ2 p-value for Mo17 x B73: '6.60e-11' Biased in favor of strain: 'B73' |
||||
| GRMZM2G133121 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.03 x 10-14 | 544 | 130 | 352 | 198 | 80.71% | 36.00% | 674 | 550 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.03e-14' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |