Displaying data sets 16401 - 16500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G43330 c-NAD-MDH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.006 x 10-3 22 2 2 2 91.67% 50.00% 24 4 TAIR8 Avg. embryo expression (dissected): '53.397'
Avg. embryo expression (LCM): '38.4292'
AT5G43330 c-NAD-MDH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.25 x 10-3 32 28 53.33% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43330 c-NAD-MDH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-12 331 334 49.77% 665 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43330 c-NAD-MDH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-13 413 39 91.37% 452 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43320 ckl8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.15 x 10-4 425 139 197 492 75.35% 71.41% 564 689 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '186.549'
Avg. expression score in LCM sample: '87.2027'
Tissue used: 'pure endosperm, no chalazal'
AT5G43320 ckl8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 2460 646 639 3864 79.20% 85.81% 3106 4503 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '718.642'
Avg. expression score in LCM sample: '87.2027'
Tissue used: 'full endosperm'
AT5G43320 ckl8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.55283 x 10-1 230 246 70 90 48.32% 56.25% 476 160 TAIR8 Avg. embryo expression (dissected): '153.648'
Avg. embryo expression (LCM): '115.212'
AT5G43320 ckl8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.106 x 10-3 716 117 85.95% 833 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43320 ckl8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 4671 389 92.31% 5060 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43320 ckl8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6571 281 95.90% 6852 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.4891 x 10-1 313 241 202 467 56.50% 69.81% 554 669 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000033'
Avg. expression score for this sample: '137.96'
Avg. expression score in LCM sample: '30.1895'
Tissue used: 'pure endosperm, no chalazal'
AT5G43310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-10 642 221 373 1145 74.39% 75.43% 863 1518 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000033'
Avg. expression score for this sample: '191.739'
Avg. expression score in LCM sample: '30.1895'
Tissue used: 'full endosperm'
AT5G43310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.168 x 10-3 370 603 154 218 38.03% 58.60% 973 372 TAIR8 Avg. embryo expression (dissected): '231.548'
Avg. embryo expression (LCM): '112.625'
AT5G43310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1 x 10-6 235 44 84.23% 279 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 605 57 91.39% 662 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1043 88 92.22% 1131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43300 GDPD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.5671 0 0 4 2 33.33% 0 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.61927'
Avg. expression score for this sample: '4.77767'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43300 GDPD3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.61927'
Avg. expression score for this sample: '2.62017'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43300 GDPD3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.05928'
Avg. embryo expression (LCM): '0'
AT5G43300 GDPD3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43300 GDPD3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.44444 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43300 GDPD3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.90909 x 10-1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43290 WRKY49 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.37985 x 10-1 4 71 2 170 5.33% 98.84% 75 172 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.04584'
Avg. expression score for this sample: '79.7838'
Avg. expression score in LCM sample: '25.6479'
Tissue used: 'pure endosperm, no chalazal'
AT5G43290 WRKY49 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1059 x 10-2 7 170 28 484 3.95% 94.53% 177 512 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.04584'
Avg. expression score for this sample: '149.132'
Avg. expression score in LCM sample: '25.6479'
Tissue used: 'full endosperm'
AT5G43290 WRKY49 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 0 1 33.33% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '2.43357'
Avg. embryo expression (LCM): '1.15539'
AT5G43290 WRKY49 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43290 WRKY49 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43290 WRKY49 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.9 x 10-12 0 21 0.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43285 LURE1.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43285 LURE1.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43285 LURE1.1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G43285 LURE1.1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43285 LURE1.1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43285 LURE1.1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43280 DCI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.3954 x 10-1 75 45 29 107 62.50% 78.68% 120 136 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.5e-22'
Avg. expression score for this sample: '126.798'
Avg. expression score in LCM sample: '48.3267'
Tissue used: 'pure endosperm, no chalazal'
AT5G43280 DCI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2 x 10-27 250 43 41 444 85.32% 91.55% 293 485 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.5e-22'
Avg. expression score for this sample: '202.971'
Avg. expression score in LCM sample: '48.3267'
Tissue used: 'full endosperm'
AT5G43280 DCI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 41 44 5 10 48.24% 66.67% 85 15 TAIR8 Avg. embryo expression (dissected): '77.1073'
Avg. embryo expression (LCM): '53.9014'
AT5G43280 DCI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.84158 x 10-1 71 7 91.03% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43280 DCI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.68015 x 10-1 789 126 86.23% 915 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43280 DCI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0 x 10-9 1124 92 92.43% 1216 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43270 SPL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 0 2 0 100.00% 0.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.37919'
Avg. expression score in LCM sample: '.881875'
Tissue used: 'pure endosperm, no chalazal'
AT5G43270 SPL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.09859 x 10-1 5 0 5 0 100.00% 0.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.18858'
Avg. expression score in LCM sample: '.881875'
Tissue used: 'full endosperm'
AT5G43270 SPL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.87187 x 10-1 17 4 5 4 80.95% 44.44% 21 9 TAIR8 Avg. embryo expression (dissected): '13.8117'
Avg. embryo expression (LCM): '13.513'
AT5G43270 SPL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.30019 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43270 SPL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.02933 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43270 SPL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-8 152 0 100.00% 152 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.06175 x 10-1 39 17 21 55 69.64% 72.37% 56 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.264236'
Avg. expression score for this sample: '97.5587'
Avg. expression score in LCM sample: '35.4367'
Tissue used: 'pure endosperm, no chalazal'
AT5G43260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.34865 x 10-1 36 24 15 64 60.00% 81.01% 60 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.264236'
Avg. expression score for this sample: '117.75'
Avg. expression score in LCM sample: '35.4367'
Tissue used: 'full endosperm'
AT5G43260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02478 x 10-1 8 12 5 6 40.00% 54.55% 20 11 TAIR8 Avg. embryo expression (dissected): '34.6026'
Avg. embryo expression (LCM): '32.062'
AT5G43260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0 x 10-5 53 2 96.36% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.399 x 10-3 92 16 85.19% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-8 121 7 94.53% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43250 NF-YC13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 2 4 66.67% 66.67% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.262'
Avg. expression score in LCM sample: '7.49594'
Tissue used: 'pure endosperm, no chalazal'
AT5G43250 NF-YC13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.04835'
Avg. expression score in LCM sample: '7.49594'
Tissue used: 'full endosperm'
AT5G43250 NF-YC13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.49845 x 10-1 2 6 2 0 25.00% 0.00% 8 2 TAIR8 Avg. embryo expression (dissected): '22.0858'
Avg. embryo expression (LCM): '22.4296'
AT5G43250 NF-YC13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43250 NF-YC13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9767 x 10-2 1 6 14.29% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43250 NF-YC13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.95652 x 10-1 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43245 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43245 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.4 0 0 3 0 0.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4'
Avg. expression score for this sample: '4.98039'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43245 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.43384'
Avg. embryo expression (LCM): '0'
AT5G43245 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43245 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.25 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43245 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 2 0 66.67% 0.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.682363'
Avg. expression score for this sample: '1.54799'
Avg. expression score in LCM sample: '1.76375'
Tissue used: 'pure endosperm, no chalazal'
AT5G43240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 13 8 8 15 61.90% 65.22% 21 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.682363'
Avg. expression score for this sample: '3.96705'
Avg. expression score in LCM sample: '1.76375'
Tissue used: 'full endosperm'
AT5G43240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 3 4 0 66.67% 0.00% 9 4 TAIR8 Avg. embryo expression (dissected): '3.70203'
Avg. embryo expression (LCM): '5.2746'
AT5G43240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.19537 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.83679 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.372 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.194616'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.104095'
Avg. embryo expression (LCM): '.452109'
AT5G43230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43211 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 2 0 0.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.76533'
Avg. expression score in LCM sample: '8.96573'
Tissue used: 'pure endosperm, no chalazal'
AT5G43211 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.20644'
Avg. expression score in LCM sample: '8.96573'
Tissue used: 'full endosperm'
AT5G43211 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '8.85126'
Avg. embryo expression (LCM): '7.66073'
AT5G43211 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43211 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43211 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.0951 x 10-1 3 5 3 29 37.50% 90.62% 8 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099876'
Avg. expression score for this sample: '6.3743'
Avg. expression score in LCM sample: '15.227'
Tissue used: 'pure endosperm, no chalazal'
AT5G43210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.45926 x 10-1 18 11 18 65 62.07% 78.31% 29 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099876'
Avg. expression score for this sample: '19.3528'
Avg. expression score in LCM sample: '15.227'
Tissue used: 'full endosperm'
AT5G43210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 3 11 0 2 21.43% 100.00% 14 2 TAIR8 Avg. embryo expression (dissected): '3.97281'
Avg. embryo expression (LCM): '11.3906'
AT5G43210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.19631 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.72304 x 10-1 92 22 80.70% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.62311 x 10-1 37 20 64.91% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.48918'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.36347'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G43200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.66667 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.3 x 10-8 94 5 5 32 94.95% 86.49% 99 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.7e-31'
Avg. expression score for this sample: '39.7544'
Avg. expression score in LCM sample: '4.11542'
Tissue used: 'pure endosperm, no chalazal'
AT5G43190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6 x 10-24 231 12 13 157 95.06% 92.35% 243 170 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.7e-31'
Avg. expression score for this sample: '91.437'
Avg. expression score in LCM sample: '4.11542'
Tissue used: 'full endosperm'
AT5G43190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.68598 x 10-1 20 30 5 18 40.00% 78.26% 50 23 TAIR8 Avg. embryo expression (dissected): '34.7918'
Avg. embryo expression (LCM): '25.4562'
AT5G43190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.22208 x 10-1 67 7 90.54% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2417 x 10-2 164 20 89.13% 184 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.1 x 10-7 542 5 99.09% 547 TAIR8 Mutant effect: 'N/A (not a MEG)'