Displaying data sets 164801 - 164900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G08040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '145.283'
Avg. expression score in LCM sample: '35.7159'
Tissue used: 'pure endosperm, no chalazal'
AT1G08040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '175.893'
Avg. embryo expression (LCM): '128.324'
AT1G08035 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.59989'
Avg. embryo expression (LCM): '11.2525'
AT1G08035 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08035 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.03675'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G08035 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.54304'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G08035 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08035 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08030 TPST endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.16001 x 10-1 50 9 84.75% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08030 TPST endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6048 x 10-2 43 12 13 58 78.18% 81.69% 55 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.10258'
Avg. expression score for this sample: '33.8178'
Avg. expression score in LCM sample: '35.5837'
Tissue used: 'full endosperm'
AT1G08030 TPST endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 30 9 18 20 76.92% 52.63% 39 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.10258'
Avg. expression score for this sample: '27.371'
Avg. expression score in LCM sample: '35.5837'
Tissue used: 'pure endosperm, no chalazal'
AT1G08030 TPST embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.89414 x 10-1 36 17 11 4 67.92% 26.67% 53 15 TAIR8 Avg. embryo expression (dissected): '37.8541'
Avg. embryo expression (LCM): '49.4934'
AT1G08030 TPST endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.17 x 10-4 108 12 90.00% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08030 TPST endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.04214 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08010 GATA11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.14211 x 10-1 10 6 62.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08010 GATA11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.8654 x 10-2 48 32 60.00% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08010 GATA11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.14886 x 10-1 49 11 81.67% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08010 GATA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 4 13 17 78.95% 56.67% 19 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208203'
Avg. expression score for this sample: '171.34'
Avg. expression score in LCM sample: '131.311'
Tissue used: 'pure endosperm, no chalazal'
AT1G08010 GATA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7033 x 10-1 95 38 40 110 71.43% 73.33% 133 150 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.208203'
Avg. expression score for this sample: '185.634'
Avg. expression score in LCM sample: '131.311'
Tissue used: 'full endosperm'
AT1G08010 GATA11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.18505 x 10-1 19 14 3 2 57.58% 40.00% 33 5 TAIR8 Avg. embryo expression (dissected): '190.531'
Avg. embryo expression (LCM): '156.53'
AT1G08005 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.73845'
Avg. embryo expression (LCM): '0'
AT1G08005 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.21514'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G08005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.17064'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G08005 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08005 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08000 GATA10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.4945 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08000 GATA10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 1 2 2 80.00% 50.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.9539'
Avg. expression score in LCM sample: '34.3343'
Tissue used: 'full endosperm'
AT1G08000 GATA10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '74.94'
Avg. expression score in LCM sample: '34.3343'
Tissue used: 'pure endosperm, no chalazal'
AT1G08000 GATA10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 1 0 50.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '117.059'
Avg. embryo expression (LCM): '97.1657'
AT1G08000 GATA10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08000 GATA10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5682 x 10-2 18 11 62.07% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 2 6 50.00% 75.00% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.070294'
Avg. expression score for this sample: '357.339'
Avg. expression score in LCM sample: '80.9708'
Tissue used: 'pure endosperm, no chalazal'
AT1G07990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.26311 x 10-1 26 3 89.66% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0604 x 10-2 15 1 1 12 93.75% 92.31% 16 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.070294'
Avg. expression score for this sample: '333.919'
Avg. expression score in LCM sample: '80.9708'
Tissue used: 'full endosperm'
AT1G07990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 0 1 2 0 0.00% 0.00% 1 2 TAIR8 Avg. embryo expression (dissected): '359.952'
Avg. embryo expression (LCM): '164.492'
AT1G07985 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '33.5883'
Avg. embryo expression (LCM): '0'
AT1G07985 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07985 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.9115'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G07985 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07985 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.04202'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G07985 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07980 NF-YC10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.198 x 10-3 365 97 79.00% 462 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07980 NF-YC10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.71877 x 10-1 148 48 55 112 75.51% 67.07% 196 167 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050039'
Avg. expression score for this sample: '396.654'
Avg. expression score in LCM sample: '100.754'
Tissue used: 'pure endosperm, no chalazal'
AT1G07980 NF-YC10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8299 x 10-1 138 51 72 166 73.02% 69.75% 189 238 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.050039'
Avg. expression score for this sample: '375.549'
Avg. expression score in LCM sample: '100.754'
Tissue used: 'full endosperm'
AT1G07980 NF-YC10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.8242 x 10-1 95 78 36 27 54.91% 42.86% 173 63 TAIR8 Avg. embryo expression (dissected): '455.337'
Avg. embryo expression (LCM): '227.875'
AT1G07980 NF-YC10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-14 395 47 89.37% 442 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07980 NF-YC10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87017 x 10-1 21 10 67.74% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '25.5382'
Avg. expression score in LCM sample: '13.9336'
Tissue used: 'pure endosperm, no chalazal'
AT1G07970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.9059'
Avg. expression score in LCM sample: '13.9336'
Tissue used: 'full endosperm'
AT1G07970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '61.8757'
Avg. embryo expression (LCM): '61.0598'
AT1G07960 PDIL5-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '89.9479'
Avg. embryo expression (LCM): '86.3025'
AT1G07960 PDIL5-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07960 PDIL5-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07960 PDIL5-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '135.051'
Avg. expression score in LCM sample: '34.8341'
Tissue used: 'full endosperm'
AT1G07960 PDIL5-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07960 PDIL5-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '91.8114'
Avg. expression score in LCM sample: '34.8341'
Tissue used: 'pure endosperm, no chalazal'
AT1G07950 MED22B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.8303'
Avg. expression score in LCM sample: '11.1263'
Tissue used: 'pure endosperm, no chalazal'
AT1G07950 MED22B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07950 MED22B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07950 MED22B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '44.196'
Avg. embryo expression (LCM): '55.4336'
AT1G07950 MED22B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '41.7159'
Avg. expression score in LCM sample: '11.1263'
Tissue used: 'full endosperm'
AT1G07950 MED22B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1388.96'
Avg. expression score in LCM sample: '2121.36'
Tissue used: 'full endosperm'
AT1G07940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2500.44'
Avg. expression score in LCM sample: '2121.36'
Tissue used: 'pure endosperm, no chalazal'
AT1G07940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4194.01'
Avg. embryo expression (LCM): '4511.23'
AT1G07940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2358 248 90.48% 2606 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.8 x 10-14 1338 641 328 160 67.61% 32.79% 1979 488 TAIR8 Avg. embryo expression (dissected): '3376.58'
Avg. embryo expression (LCM): '4229.13'
AT1G07930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.65135 x 10-1 430 90 304 352 82.69% 53.66% 520 656 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159064'
Avg. expression score for this sample: '878.81'
Avg. expression score in LCM sample: '1539.05'
Tissue used: 'full endosperm'
AT1G07930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6 x 10-7 162 164 49.69% 326 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.3969 x 10-2 581 155 323 236 78.94% 42.22% 736 559 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159064'
Avg. expression score for this sample: '1467.27'
Avg. expression score in LCM sample: '1539.05'
Tissue used: 'pure endosperm, no chalazal'
AT1G07930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.03 x 10-4 1440 963 59.93% 2403 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 82 648 11.23% 730 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.199 x 10-2 342 30 142 87 91.94% 37.99% 372 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000387'
Avg. expression score for this sample: '4575.86'
Avg. expression score in LCM sample: '2795.09'
Tissue used: 'pure endosperm, no chalazal'
AT1G07920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5 x 10-24 467 107 30 14 81.36% 31.82% 574 44 TAIR8 Avg. embryo expression (dissected): '6915.57'
Avg. embryo expression (LCM): '6228.49'
AT1G07920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1416 22 98.47% 1438 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1 x 10-22 55 149 26.96% 204 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9 x 10-7 1054 40 783 138 96.34% 14.98% 1094 921 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000387'
Avg. expression score for this sample: '2435.7'
Avg. expression score in LCM sample: '2795.09'
Tissue used: 'full endosperm'
AT1G07910 RNL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 5 50.00% 100.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.2859'
Avg. expression score in LCM sample: '11.7289'
Tissue used: 'full endosperm'
AT1G07910 RNL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07910 RNL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.8711'
Avg. expression score in LCM sample: '11.7289'
Tissue used: 'pure endosperm, no chalazal'
AT1G07910 RNL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6996 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07910 RNL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8966 x 10-2 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07910 RNL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.37186 x 10-1 6 3 0 0 66.67% 9 0 TAIR8 Avg. embryo expression (dissected): '18.373'
Avg. embryo expression (LCM): '19.0388'
AT1G07901 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.73003'
Avg. embryo expression (LCM): '8.26354'
AT1G07901 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07901 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07901 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.67922'
Avg. expression score in LCM sample: '38.6849'
Tissue used: 'full endosperm'
AT1G07901 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G07901 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.08772'
Avg. expression score in LCM sample: '38.6849'
Tissue used: 'pure endosperm, no chalazal'
AT1G07900 LBD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G07900 LBD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'