Displaying data sets 164301 - 164400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G08820 VAP27-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08820 VAP27-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '262.42'
Avg. embryo expression (LCM): '190.664'
AT1G08820 VAP27-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.61538 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08820 VAP27-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '603.948'
Avg. expression score in LCM sample: '180.931'
Tissue used: 'pure endosperm, no chalazal'
AT1G08810 MYB60 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.0226 x 10-2 1 0 0 10 100.00% 100.00% 1 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.5582'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G08810 MYB60 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 96 0 100.00% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08810 MYB60 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08810 MYB60 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 172 2 2 335 98.85% 99.41% 174 337 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1887.36'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G08810 MYB60 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.48578 x 10-1 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08810 MYB60 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.47918'
Avg. embryo expression (LCM): '0'
AT1G08800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '9.45991'
Avg. embryo expression (LCM): '4.05642'
AT1G08800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1 x 10-6 92 3 96.84% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.68054 x 10-1 12 2 5 9 85.71% 64.29% 14 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.316964'
Avg. expression score for this sample: '118.523'
Avg. expression score in LCM sample: '44.5788'
Tissue used: 'pure endosperm, no chalazal'
AT1G08800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.82186 x 10-1 37 8 82.22% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0503 x 10-2 5 9 35.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.77684 x 10-1 15 10 5 25 60.00% 83.33% 25 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.316964'
Avg. expression score for this sample: '186.422'
Avg. expression score in LCM sample: '44.5788'
Tissue used: 'full endosperm'
AT1G08790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.633722'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G08790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G08790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G08790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08780 AIP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.324 x 10-3 191 35 84.51% 226 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08780 AIP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 63 16 24 19 79.75% 44.19% 79 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02107'
Avg. expression score for this sample: '473.919'
Avg. expression score in LCM sample: '186.487'
Tissue used: 'pure endosperm, no chalazal'
AT1G08780 AIP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.7672 x 10-1 12 5 70.59% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08780 AIP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.392 x 10-3 107 7 50 96 93.86% 65.75% 114 146 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02107'
Avg. expression score for this sample: '433.255'
Avg. expression score in LCM sample: '186.487'
Tissue used: 'full endosperm'
AT1G08780 AIP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-14 101 130 43.72% 231 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08780 AIP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.69 x 10-3 81 31 7 1 72.32% 12.50% 112 8 TAIR8 Avg. embryo expression (dissected): '760.64'
Avg. embryo expression (LCM): '566.078'
AT1G08770 PRA1.E embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.12'
Avg. embryo expression (LCM): '8.71565'
AT1G08770 PRA1.E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64472'
Avg. expression score for this sample: '13.115'
Avg. expression score in LCM sample: '20.4154'
Tissue used: 'pure endosperm, no chalazal'
AT1G08770 PRA1.E endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.93506 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08770 PRA1.E endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08770 PRA1.E endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08770 PRA1.E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4472 x 10-1 8 2 0 3 80.00% 100.00% 10 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.64472'
Avg. expression score for this sample: '13.9043'
Avg. expression score in LCM sample: '20.4154'
Tissue used: 'full endosperm'
AT1G08760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.3038 x 10-2 119 41 71 174 74.38% 71.02% 160 245 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162358'
Avg. expression score for this sample: '182.327'
Avg. expression score in LCM sample: '149.728'
Tissue used: 'full endosperm'
AT1G08760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.69 x 10-4 102 17 85.71% 119 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9527 x 10-1 33 10 76.74% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.55435 x 10-1 53 34 15 19 60.92% 55.88% 87 34 TAIR8 Avg. embryo expression (dissected): '88.5378'
Avg. embryo expression (LCM): '80.3875'
AT1G08760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3 x 10-21 253 12 95.47% 265 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.20335 x 10-1 138 56 72 129 71.13% 64.18% 194 201 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162358'
Avg. expression score for this sample: '155.05'
Avg. expression score in LCM sample: '149.728'
Tissue used: 'pure endosperm, no chalazal'
AT1G08750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 6 1 1 3 85.71% 75.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.096048'
Avg. expression score for this sample: '26.7381'
Avg. expression score in LCM sample: '18.4018'
Tissue used: 'pure endosperm, no chalazal'
AT1G08750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 20 3 86.96% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.80579 x 10-1 3 1 2 16 75.00% 88.89% 4 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.096048'
Avg. expression score for this sample: '41.3402'
Avg. expression score in LCM sample: '18.4018'
Tissue used: 'full endosperm'
AT1G08750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 5 3 1 2 62.50% 66.67% 8 3 TAIR8 Avg. embryo expression (dissected): '45.3423'
Avg. embryo expression (LCM): '48.8152'
AT1G08730 XIC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.02296'
Avg. embryo expression (LCM): '3.20244'
AT1G08730 XIC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08730 XIC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.495252'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G08730 XIC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08730 XIC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08730 XIC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.983051'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G08720 EDR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2415 x 10-2 95 30 50 134 76.00% 72.83% 125 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.058187'
Avg. expression score for this sample: '70.135'
Avg. expression score in LCM sample: '20.1214'
Tissue used: 'full endosperm'
AT1G08720 EDR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.94 x 10-4 105 13 88.98% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08720 EDR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.44 x 10-4 8 15 34.78% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08720 EDR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.67472 x 10-1 18 10 5 6 64.29% 54.55% 28 11 TAIR8 Avg. embryo expression (dissected): '31.0728'
Avg. embryo expression (LCM): '24.5646'
AT1G08720 EDR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.66781 x 10-1 35 14 18 37 71.43% 67.27% 49 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.058187'
Avg. expression score for this sample: '52.2484'
Avg. expression score in LCM sample: '20.1214'
Tissue used: 'pure endosperm, no chalazal'
AT1G08720 EDR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1092 x 10-2 114 22 83.82% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '219.363'
Avg. expression score in LCM sample: '63.1569'
Tissue used: 'pure endosperm, no chalazal'
AT1G08710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '200.138'
Avg. expression score in LCM sample: '63.1569'
Tissue used: 'full endosperm'
AT1G08710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '178.902'
Avg. embryo expression (LCM): '97.8188'
AT1G08700 PS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.56639 x 10-1 595 581 120 147 50.60% 55.06% 1176 267 TAIR8 Avg. embryo expression (dissected): '1111.46'
Avg. embryo expression (LCM): '651.69'
AT1G08700 PS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.19306 x 10-1 539 294 230 467 64.71% 67.00% 833 697 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078492'
Avg. expression score for this sample: '944.803'
Avg. expression score in LCM sample: '462.911'
Tissue used: 'pure endosperm, no chalazal'
AT1G08700 PS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-14 668 149 81.76% 817 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08700 PS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0 x 10-10 932 260 78.19% 1192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08700 PS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.52046 x 10-1 135 50 72.97% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08700 PS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.992 x 10-3 558 166 254 520 77.07% 67.18% 724 774 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.078492'
Avg. expression score for this sample: '784.476'
Avg. expression score in LCM sample: '462.911'
Tissue used: 'full endosperm'
AT1G08695 SCRL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G08695 SCRL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08695 SCRL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08695 SCRL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.47776'
Avg. embryo expression (LCM): '28.4326'
AT1G08695 SCRL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08695 SCRL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.983035'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G08680 ZIGA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.25596 x 10-1 7 3 6 25 70.00% 80.65% 10 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.281461'
Avg. expression score for this sample: '66.0617'
Avg. expression score in LCM sample: '48.6942'
Tissue used: 'pure endosperm, no chalazal'
AT1G08680 ZIGA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.22347 x 10-1 21 5 80.77% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08680 ZIGA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.7416 x 10-2 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08680 ZIGA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.29306 x 10-1 20 16 10 44 55.56% 81.48% 36 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.281461'
Avg. expression score for this sample: '107.547'
Avg. expression score in LCM sample: '48.6942'
Tissue used: 'full endosperm'
AT1G08680 ZIGA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9237 x 10-2 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08680 ZIGA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.31799 x 10-1 10 18 5 2 35.71% 28.57% 28 7 TAIR8 Avg. embryo expression (dissected): '83.7348'
Avg. embryo expression (LCM): '77.725'
AT1G08670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.368429'
Avg. embryo expression (LCM): '0'
AT1G08670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.97316'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G08670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.00668'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G08660 MGP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '124.639'
Avg. expression score in LCM sample: '20.1361'
Tissue used: 'full endosperm'
AT1G08660 MGP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08660 MGP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08660 MGP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '154.406'
Avg. embryo expression (LCM): '71.9481'
AT1G08660 MGP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '178.097'
Avg. expression score in LCM sample: '20.1361'
Tissue used: 'pure endosperm, no chalazal'
AT1G08660 MGP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08650 PPCK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.53371 x 10-1 44 9 83.02% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08650 PPCK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.23226 x 10-1 36 10 15 31 78.26% 67.39% 46 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055114'
Avg. expression score for this sample: '44.98'
Avg. expression score in LCM sample: '3.20415'
Tissue used: 'pure endosperm, no chalazal'
AT1G08650 PPCK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.21563 x 10-1 31 4 88.57% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08650 PPCK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7617 x 10-2 35 11 10 42 76.09% 80.77% 46 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.055114'
Avg. expression score for this sample: '77.0015'
Avg. expression score in LCM sample: '3.20415'
Tissue used: 'full endosperm'
AT1G08650 PPCK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.491 x 10-3 24 20 54.55% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G08650 PPCK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.03517 x 10-1 40 26 24 22 60.61% 47.83% 66 46 TAIR8 Avg. embryo expression (dissected): '108.175'
Avg. embryo expression (LCM): '63.986'