GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G134424	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.83767 x 10^-1	702	335	403	805	67.70%	66.64%	1037	1208	RefGen V2	χ2 p-value for B73 x Mo17: '.4823609' χ2 p-value for Mo17 x B73: '.983767' Biased in favor of strain: ''
GRMZM2G134424	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.7 x 10^-6	1025	622	854	675	62.23%	44.15%	1647	1529	RefGen V2	χ2 p-value for B73 x Mo17: '3.08e-23' χ2 p-value for Mo17 x B73: '4.70e-06' Biased in favor of strain: 'B73'
GRMZM2G134398	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.51 x 10^-7	389	197	326	205	66.38%	38.61%	586	531	RefGen V2	χ2 p-value for B73 x Mo17: '2.17e-15' χ2 p-value for Mo17 x B73: '1.51e-07' Biased in favor of strain: 'B73'
GRMZM2G134398	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.86356 x 10^-2	474	194	232	291	70.96%	55.64%	668	523	RefGen V2	χ2 p-value for B73 x Mo17: '.0186356' χ2 p-value for Mo17 x B73: '8.84e-08' Biased in favor of strain: ''
GRMZM2G134396	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.574791 x 10^-1	224	127	148	252	63.82%	63.00%	351	400	RefGen V2	χ2 p-value for B73 x Mo17: '.2574791' χ2 p-value for Mo17 x B73: '.1197947' Biased in favor of strain: ''
GRMZM2G134396	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.5202 x 10^-3	300	171	230	173	63.69%	42.93%	471	403	RefGen V2	χ2 p-value for B73 x Mo17: '2.78e-09' χ2 p-value for Mo17 x B73: '.0045202' Biased in favor of strain: 'B73'
GRMZM2G134389	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.150823 x 10^-1	35	21	27	32	62.50%	54.24%	56	59	RefGen V2	χ2 p-value for B73 x Mo17: '.0613688' χ2 p-value for Mo17 x B73: '.5150823' Biased in favor of strain: ''
GRMZM2G134389	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.88823 x 10^-2	49	13	24	19	79.03%	44.19%	62	43	RefGen V2	χ2 p-value for B73 x Mo17: '.0388823' χ2 p-value for Mo17 x B73: '.0017651' Biased in favor of strain: ''
GRMZM2G134382	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.1993 x 10^-2	17	3	13	2	85.00%	13.33%	20	15	RefGen V2	χ2 p-value for B73 x Mo17: '.081993' χ2 p-value for Mo17 x B73: '.0000118' Biased in favor of strain: ''
GRMZM2G134382	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.892554 x 10^-1	28	19	13	28	59.57%	68.29%	47	41	RefGen V2	χ2 p-value for B73 x Mo17: '.1892554' χ2 p-value for Mo17 x B73: '.0191496' Biased in favor of strain: ''
GRMZM2G134367	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.11 x 10^-18	619	337	628	355	64.75%	36.11%	956	983	RefGen V2	χ2 p-value for B73 x Mo17: '7.48e-20' χ2 p-value for Mo17 x B73: '3.11e-18' Biased in favor of strain: 'B73'
GRMZM2G134367	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1316	274	865	875	82.77%	50.29%	1590	1740	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G134341	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.297661 x 10^-1	76	17	31	47	81.72%	60.26%	93	78	RefGen V2	χ2 p-value for B73 x Mo17: '.0020731' χ2 p-value for Mo17 x B73: '.2297661' Biased in favor of strain: ''
GRMZM2G134341	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.0669 x 10^-3	236	103	243	188	69.62%	43.62%	339	431	RefGen V2	χ2 p-value for B73 x Mo17: '5.06e-13' χ2 p-value for Mo17 x B73: '.0080669' Biased in favor of strain: 'B73'
GRMZM2G134340	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3406 x 10^-3	40	16	38	10	71.43%	20.83%	56	48	RefGen V2	χ2 p-value for B73 x Mo17: '.0013406' χ2 p-value for Mo17 x B73: '.0000531' Biased in favor of strain: 'B73'
GRMZM2G134340	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.62 x 10^-5	69	3	24	14	95.83%	36.84%	72	38	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-07' χ2 p-value for Mo17 x B73: '.0000962' Biased in favor of strain: 'B73'
GRMZM2G134334	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.13 x 10^-9	67	0	73	9	100.00%	10.98%	67	82	RefGen V2	χ2 p-value for B73 x Mo17: '7.13e-09' χ2 p-value for Mo17 x B73: '1.04e-26' Biased in favor of strain: 'B73'
GRMZM2G134334	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	734	26	256	9	96.58%	3.40%	760	265	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G134332	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.47 x 10^-4	75	39	105	46	65.79%	30.46%	114	151	RefGen V2	χ2 p-value for B73 x Mo17: '.000747' χ2 p-value for Mo17 x B73: '1.58e-06' Biased in favor of strain: 'B73'
GRMZM2G134332	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.63 x 10^-7	177	36	142	53	83.10%	27.18%	213	195	RefGen V2	χ2 p-value for B73 x Mo17: '3.63e-07' χ2 p-value for Mo17 x B73: '1.32e-31' Biased in favor of strain: 'B73'
GRMZM2G134329	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	1	6	5	88.89%	45.45%	9	11	RefGen V2	χ2 p-value for B73 x Mo17: '.157302' χ2 p-value for Mo17 x B73: '.135593' Biased in favor of strain: ''
GRMZM2G134329	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.456028 x 10^-1	18	20	14	5	47.37%	26.32%	38	19	RefGen V2	χ2 p-value for B73 x Mo17: '.7456028' χ2 p-value for Mo17 x B73: '.0389475' Biased in favor of strain: ''
GRMZM2G134313	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.9635 x 10^-3	218	166	245	139	56.77%	36.20%	384	384	RefGen V2	χ2 p-value for B73 x Mo17: '.0079635' χ2 p-value for Mo17 x B73: '6.33e-08' Biased in favor of strain: 'B73'
GRMZM2G134313	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.43 x 10^-11	156	17	76	18	90.17%	19.15%	173	94	RefGen V2	χ2 p-value for B73 x Mo17: '5.43e-11' χ2 p-value for Mo17 x B73: '1.47e-22' Biased in favor of strain: 'B73'
GRMZM2G134308	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.09 x 10^-7	165	26	79	71	86.39%	47.33%	191	150	RefGen V2	χ2 p-value for B73 x Mo17: '7.40e-09' χ2 p-value for Mo17 x B73: '5.09e-07' Biased in favor of strain: 'B73'
GRMZM2G134308	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.67 x 10^-21	493	237	462	198	67.53%	30.00%	730	660	RefGen V2	χ2 p-value for B73 x Mo17: '2.67e-21' χ2 p-value for Mo17 x B73: '9.02e-25' Biased in favor of strain: 'B73'
GRMZM2G134295	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.082209 x 10^-1	380	244	280	268	60.90%	48.91%	624	548	RefGen V2	χ2 p-value for B73 x Mo17: '5.20e-08' χ2 p-value for Mo17 x B73: '.6082209' Biased in favor of strain: ''
GRMZM2G134295	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.37285 x 10^-2	534	223	263	427	70.54%	61.88%	757	690	RefGen V2	χ2 p-value for B73 x Mo17: '.0237285' χ2 p-value for Mo17 x B73: '.007699' Biased in favor of strain: ''
GRMZM2G134279	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	8	0		0.00%	0	8	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G134279	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.485063 x 10^-1	16	9	11	14	64.00%	56.00%	25	25	RefGen V2	χ2 p-value for B73 x Mo17: '.1615133' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: ''
GRMZM2G134270	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.13 x 10^-5	243	423	253	349	36.49%	57.97%	666	602	RefGen V2	χ2 p-value for B73 x Mo17: '3.06e-12' χ2 p-value for Mo17 x B73: '.0000913' Biased in favor of strain: 'Mo17'
GRMZM2G134270	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.39 x 10^-8	326	298	151	504	52.24%	76.95%	624	655	RefGen V2	χ2 p-value for B73 x Mo17: '2.12e-14' χ2 p-value for Mo17 x B73: '2.39e-08' Biased in favor of strain: 'Mo17'
GRMZM2G134260	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999804 x 10^-1	12	6	6	32	66.67%	84.21%	18	38	RefGen V2	χ2 p-value for B73 x Mo17: '.9999804' χ2 p-value for Mo17 x B73: '.0217815' Biased in favor of strain: ''
GRMZM2G134260	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.93464 x 10^-2	13	5	29	3	72.22%	9.38%	18	32	RefGen V2	χ2 p-value for B73 x Mo17: '.0593464' χ2 p-value for Mo17 x B73: '4.30e-06' Biased in favor of strain: ''
GRMZM2G134256	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0 x 10^-30	1375	835	1782	1064	62.22%	37.39%	2210	2846	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G134256	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.31474 x 10^-2	193	200	89	229	49.11%	72.01%	393	318	RefGen V2	χ2 p-value for B73 x Mo17: '1.54e-13' χ2 p-value for Mo17 x B73: '.0431474' Biased in favor of strain: ''
GRMZM2G134251	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.10682 x 10^-2	852	369	342	572	69.78%	62.58%	1221	914	RefGen V2	χ2 p-value for B73 x Mo17: '.0210682' χ2 p-value for Mo17 x B73: '.008804' Biased in favor of strain: ''
GRMZM2G134251	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.76454 x 10^-2	529	413	521	459	56.16%	46.84%	942	980	RefGen V2	χ2 p-value for B73 x Mo17: '.0001572' χ2 p-value for Mo17 x B73: '.0476454' Biased in favor of strain: 'B73'
GRMZM2G134235	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.34 x 10^-8	427	281	423	278	60.31%	39.66%	708	701	RefGen V2	χ2 p-value for B73 x Mo17: '4.09e-08' χ2 p-value for Mo17 x B73: '4.34e-08' Biased in favor of strain: 'B73'
GRMZM2G134235	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.599454 x 10^-1	60	33	20	63	64.52%	75.90%	93	83	RefGen V2	χ2 p-value for B73 x Mo17: '.6599454' χ2 p-value for Mo17 x B73: '.0742377' Biased in favor of strain: ''
GRMZM2G134230	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.074192 x 10^-1	1223	596	827	1076	67.23%	56.54%	1819	1903	RefGen V2	χ2 p-value for B73 x Mo17: '.6074192' χ2 p-value for Mo17 x B73: '7.32e-21' Biased in favor of strain: ''
GRMZM2G134230	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.98 x 10^-11	2598	3235	2367	2847	44.54%	54.60%	5833	5214	RefGen V2	χ2 p-value for B73 x Mo17: '7.40e-17' χ2 p-value for Mo17 x B73: '2.98e-11' Biased in favor of strain: 'Mo17'
GRMZM2G134227	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.737178 x 10^-1	56	45	53	41	55.45%	43.62%	101	94	RefGen V2	χ2 p-value for B73 x Mo17: '.2737178' χ2 p-value for Mo17 x B73: '.2158253' Biased in favor of strain: ''
GRMZM2G134227	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.226548 x 10^-1	39	24	28	37	61.90%	56.92%	63	65	RefGen V2	χ2 p-value for B73 x Mo17: '.4226548' χ2 p-value for Mo17 x B73: '.0956316' Biased in favor of strain: ''
GRMZM2G134214	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.226089 x 10^-1	327	160	193	364	67.15%	65.35%	487	557	RefGen V2	χ2 p-value for B73 x Mo17: '.8226089' χ2 p-value for Mo17 x B73: '.5098028' Biased in favor of strain: ''
GRMZM2G134214	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.986517 x 10^-1	327	236	269	240	58.08%	47.15%	563	509	RefGen V2	χ2 p-value for B73 x Mo17: '.0001255' χ2 p-value for Mo17 x B73: '.1986517' Biased in favor of strain: ''
GRMZM2G134192	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	4	0	100.00%	0.00%	7	4	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G134192	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	0	100.00%	0.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: ''
GRMZM2G134182	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		121	3	6	2	97.58%	25.00%	124	8	RefGen V2	χ2 p-value for B73 x Mo17: '2.83e-13' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: ''
GRMZM2G134182	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	3	3	1	82.35%	25.00%	17	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0076329' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G134178	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	1	100.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G134178	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G134176	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.4576 x 10^-3	697	290	344	551	70.62%	61.56%	987	895	RefGen V2	χ2 p-value for B73 x Mo17: '.0084576' χ2 p-value for Mo17 x B73: '.0012032' Biased in favor of strain: 'B73'
GRMZM2G134176	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.493059 x 10^-1	327	180	229	205	64.50%	47.24%	507	434	RefGen V2	χ2 p-value for B73 x Mo17: '6.64e-11' χ2 p-value for Mo17 x B73: '.2493059' Biased in favor of strain: ''
GRMZM2G134162	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.356 x 10^-3	56	31	127	26	64.37%	16.99%	87	153	RefGen V2	χ2 p-value for B73 x Mo17: '.007356' χ2 p-value for Mo17 x B73: '3.20e-16' Biased in favor of strain: 'B73'
GRMZM2G134162	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		23	0	8	0	100.00%	0.00%	23	8	RefGen V2	χ2 p-value for B73 x Mo17: '.000696' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: ''
GRMZM2G134149	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7 x 10^-5	142	31	70	20	82.08%	22.22%	173	90	RefGen V2	χ2 p-value for B73 x Mo17: '.000017' χ2 p-value for Mo17 x B73: '3.74e-19' Biased in favor of strain: 'B73'
GRMZM2G134149	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.16 x 10^-19	137	19	144	28	87.82%	16.28%	156	172	RefGen V2	χ2 p-value for B73 x Mo17: '3.47e-21' χ2 p-value for Mo17 x B73: '9.16e-19' Biased in favor of strain: 'B73'
GRMZM2G134134	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.079589 x 10^-1	50	45	55	43	52.63%	43.88%	95	98	RefGen V2	χ2 p-value for B73 x Mo17: '.6079589' χ2 p-value for Mo17 x B73: '.2254423' Biased in favor of strain: ''
GRMZM2G134134	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.511133 x 10^-1	19	4	18	23	82.61%	56.10%	23	41	RefGen V2	χ2 p-value for B73 x Mo17: '.1048367' χ2 p-value for Mo17 x B73: '.1511133' Biased in favor of strain: ''
GRMZM2G134130	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.299 x 10^-4	50	6	29	15	89.29%	34.09%	56	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0003299' χ2 p-value for Mo17 x B73: '4.57e-06' Biased in favor of strain: 'B73'
GRMZM2G134130	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	8	5	15	5	61.54%	25.00%	13	20	RefGen V2	χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G134113	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.948866 x 10^-1	12	14	27	34	46.15%	55.74%	26	61	RefGen V2	χ2 p-value for B73 x Mo17: '.6948866' χ2 p-value for Mo17 x B73: '.3701149' Biased in favor of strain: ''
GRMZM2G134113	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.365937 x 10^-1	32	15	11	14	68.09%	56.00%	47	25	RefGen V2	χ2 p-value for B73 x Mo17: '.8365937' χ2 p-value for Mo17 x B73: '.2578989' Biased in favor of strain: ''
GRMZM2G134073	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.76 x 10^-13	562	86	263	287	86.73%	52.18%	648	550	RefGen V2	χ2 p-value for B73 x Mo17: '2.40e-27' χ2 p-value for Mo17 x B73: '5.76e-13' Biased in favor of strain: 'B73'
GRMZM2G134073	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.89044 x 10^-2	326	142	361	318	69.66%	46.83%	468	679	RefGen V2	χ2 p-value for B73 x Mo17: '1.81e-17' χ2 p-value for Mo17 x B73: '.0989044' Biased in favor of strain: ''
GRMZM2G134072	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.51 x 10^-9	0	34	1	52	0.00%	98.11%	34	53	RefGen V2	χ2 p-value for B73 x Mo17: '5.51e-09' χ2 p-value for Mo17 x B73: '2.46e-12' Biased in favor of strain: 'Mo17'
GRMZM2G134072	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.54 x 10^-6	0	35	0	43	0.00%	100.00%	35	43	RefGen V2	χ2 p-value for B73 x Mo17: '5.93e-17' χ2 p-value for Mo17 x B73: '3.54e-06' Biased in favor of strain: 'Mo17'
GRMZM2G134064	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4616 x 10^-3	66	13	39	14	83.54%	26.42%	79	53	RefGen V2	χ2 p-value for B73 x Mo17: '.0014616' χ2 p-value for Mo17 x B73: '5.09e-10' Biased in favor of strain: 'B73'
GRMZM2G134064	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.287333 x 10^-1	45	37	34	29	54.88%	46.03%	82	63	RefGen V2	χ2 p-value for B73 x Mo17: '.376992' χ2 p-value for Mo17 x B73: '.5287333' Biased in favor of strain: ''
GRMZM2G134023	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	0	0	75.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G134023	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	2	5	100.00%	71.43%	9	7	RefGen V2	χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: ''
GRMZM2G133988	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.16 x 10^-12	0	58	0	93	0.00%	100.00%	58	93	RefGen V2	χ2 p-value for B73 x Mo17: '4.75e-27' χ2 p-value for Mo17 x B73: '9.16e-12' Biased in favor of strain: 'Mo17'
GRMZM2G133988	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.97 x 10^-9	0	36	0	49	0.00%	100.00%	36	49	RefGen V2	χ2 p-value for B73 x Mo17: '1.97e-09' χ2 p-value for Mo17 x B73: '2.56e-12' Biased in favor of strain: 'Mo17'
GRMZM2G133978	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.655179 x 10^-1	16	4	9	4	80.00%	30.77%	20	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0072904' χ2 p-value for Mo17 x B73: '.1655179' Biased in favor of strain: ''
GRMZM2G133978	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	10	10	100.00%	50.00%	8	20	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.1138462' Biased in favor of strain: ''
GRMZM2G133969	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.447117 x 10^-1	11	3	3	16	78.57%	84.21%	14	19	RefGen V2	χ2 p-value for B73 x Mo17: '.3447117' χ2 p-value for Mo17 x B73: '.1047575' Biased in favor of strain: ''
GRMZM2G133969	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.132534 x 10^-1	56	65	55	37	46.28%	40.22%	121	92	RefGen V2	χ2 p-value for B73 x Mo17: '.4132534' χ2 p-value for Mo17 x B73: '.0605689' Biased in favor of strain: ''
GRMZM2G133966	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.57899 x 10^-1	28	14	21	29	66.67%	58.00%	42	50	RefGen V2	χ2 p-value for B73 x Mo17: '.0307536' χ2 p-value for Mo17 x B73: '.257899' Biased in favor of strain: ''
GRMZM2G133966	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.267995 x 10^-1	12	2	6	7	85.71%	53.85%	14	13	RefGen V2	χ2 p-value for B73 x Mo17: '.1305732' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: ''
GRMZM2G133958	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1704 x 10^-2	150	183	153	389	45.05%	71.77%	333	542	RefGen V2	χ2 p-value for B73 x Mo17: '5.76e-17' χ2 p-value for Mo17 x B73: '.011704' Biased in favor of strain: ''
GRMZM2G133958	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.053805 x 10^-1	327	273	329	308	54.50%	48.35%	600	637	RefGen V2	χ2 p-value for B73 x Mo17: '.0274863' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: ''
GRMZM2G133943	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.936464 x 10^-1	18	11	8	16	62.07%	66.67%	29	24	RefGen V2	χ2 p-value for B73 x Mo17: '.1936464' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G133943	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.13505 x 10^-1	38	9	18	31	80.85%	63.27%	47	49	RefGen V2	χ2 p-value for B73 x Mo17: '.03913' χ2 p-value for Mo17 x B73: '.613505' Biased in favor of strain: ''
GRMZM2G133941	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.367063 x 10^-1	42	28	51	51	60.00%	50.00%	70	102	RefGen V2	χ2 p-value for B73 x Mo17: '.2367063' χ2 p-value for Mo17 x B73: '.000356' Biased in favor of strain: ''
GRMZM2G133941	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.48635 x 10^-1	194	151	173	156	56.23%	47.42%	345	329	RefGen V2	χ2 p-value for B73 x Mo17: '.0206106' χ2 p-value for Mo17 x B73: '.348635' Biased in favor of strain: ''
GRMZM2G133937	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.434293 x 10^-1	558	481	391	433	53.71%	52.55%	1039	824	RefGen V2	χ2 p-value for B73 x Mo17: '.0169027' χ2 p-value for Mo17 x B73: '.1434293' Biased in favor of strain: ''
GRMZM2G133937	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.473925 x 10^-1	242	136	164	318	64.02%	65.98%	378	482	RefGen V2	χ2 p-value for B73 x Mo17: '.2751914' χ2 p-value for Mo17 x B73: '.7473925' Biased in favor of strain: ''
GRMZM2G133919	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G133919	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G133895	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.34356 x 10^-2	148	36	63	40	80.43%	38.83%	184	103	RefGen V2	χ2 p-value for B73 x Mo17: '1.50e-16' χ2 p-value for Mo17 x B73: '.0234356' Biased in favor of strain: 'B73'
GRMZM2G133895	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.361392 x 10^-1	70	26	61	126	72.92%	67.38%	96	187	RefGen V2	χ2 p-value for B73 x Mo17: '.1939453' χ2 p-value for Mo17 x B73: '.8361392' Biased in favor of strain: ''
GRMZM2G133854	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.16 x 10^-7	326	90	174	186	78.37%	51.67%	416	360	RefGen V2	χ2 p-value for B73 x Mo17: '4.16e-07' χ2 p-value for Mo17 x B73: '1.57e-09' Biased in favor of strain: 'B73'
GRMZM2G133854	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.58 x 10^-7	432	262	391	263	62.25%	40.21%	694	654	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-10' χ2 p-value for Mo17 x B73: '5.58e-07' Biased in favor of strain: 'B73'
GRMZM2G133838	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.42 x 10^-26	627	145	458	190	81.22%	29.32%	772	648	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.42e-26' Biased in favor of strain: 'B73'
GRMZM2G133838	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.74 x 10^-15	549	129	261	183	80.97%	41.22%	678	444	RefGen V2	χ2 p-value for B73 x Mo17: '2.74e-15' χ2 p-value for Mo17 x B73: '5.50e-30' Biased in favor of strain: 'B73'
GRMZM2G133836	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	0	2	100.00%	100.00%	8	2	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G133836	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.89475 x 10^-2	14	5	22	8	73.68%	26.67%	19	30	RefGen V2	χ2 p-value for B73 x Mo17: '.0389475' χ2 p-value for Mo17 x B73: '.0105871' Biased in favor of strain: 'B73'
GRMZM2G133819	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	19	14	8	8	57.58%	50.00%	33	16	RefGen V2	χ2 p-value for B73 x Mo17: '.3840882' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G133819	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.547207 x 10^-1	13	11	4	6	54.17%	60.00%	24	10	RefGen V2	χ2 p-value for B73 x Mo17: '.1939214' χ2 p-value for Mo17 x B73: '.6547207' Biased in favor of strain: ''

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