Displaying data sets 163601 - 163700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G09840 SK41 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.01134 x 10-1 109 96 26 39 53.17% 60.00% 205 65 TAIR8 Avg. embryo expression (dissected): '93.2939'
Avg. embryo expression (LCM): '67.9168'
AT1G09840 SK41 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 676 41 94.28% 717 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09830 PUR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-27 474 50 90.46% 524 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09830 PUR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.99054 x 10-1 274 166 62.27% 440 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09830 PUR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.79157 x 10-1 134 60 72 121 69.07% 62.69% 194 193 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.760643'
Avg. expression score for this sample: '64.2623'
Avg. expression score in LCM sample: '53.4857'
Tissue used: 'pure endosperm, no chalazal'
AT1G09830 PUR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.0256 379 264 81 55 58.94% 40.44% 643 136 TAIR8 Avg. embryo expression (dissected): '189.319'
Avg. embryo expression (LCM): '247.517'
AT1G09830 PUR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.3786 x 10-1 133 48 116 184 73.48% 61.33% 181 300 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.760643'
Avg. expression score for this sample: '60.5726'
Avg. expression score in LCM sample: '53.4857'
Tissue used: 'full endosperm'
AT1G09830 PUR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.60078 x 10-1 42 31 57.53% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 48 17 73.85% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.4503 x 10-2 92 139 40 34 39.83% 45.95% 231 74 TAIR8 Avg. embryo expression (dissected): '116.993'
Avg. embryo expression (LCM): '77.3859'
AT1G09820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.1 x 10-5 262 73 123 346 78.21% 73.77% 335 469 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00012'
Avg. expression score for this sample: '144.095'
Avg. expression score in LCM sample: '47.0186'
Tissue used: 'full endosperm'
AT1G09820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.10139 x 10-1 351 110 76.14% 461 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.22993 x 10-1 109 69 32 132 61.24% 80.49% 178 164 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00012'
Avg. expression score for this sample: '81.1594'
Avg. expression score in LCM sample: '47.0186'
Tissue used: 'pure endosperm, no chalazal'
AT1G09820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-13 416 47 89.85% 463 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09815 POLD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9319 x 10-2 281 108 72.24% 389 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09815 POLD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.62948 x 10-1 471 145 204 221 76.46% 52.00% 616 425 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.712029'
Avg. expression score for this sample: '799.063'
Avg. expression score in LCM sample: '302.468'
Tissue used: 'pure endosperm, no chalazal'
AT1G09815 POLD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.65565 x 10-1 224 58 135 202 79.43% 59.94% 282 337 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.712029'
Avg. expression score for this sample: '330.494'
Avg. expression score in LCM sample: '302.468'
Tissue used: 'full endosperm'
AT1G09815 POLD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 94 46 67.14% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09815 POLD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.19703 x 10-1 406 354 72 56 53.42% 43.75% 760 128 TAIR8 Avg. embryo expression (dissected): '936.233'
Avg. embryo expression (LCM): '702.59'
AT1G09815 POLD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-5 255 67 79.19% 322 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09812 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09812 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.33006'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G09812 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09812 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.3579'
Avg. embryo expression (LCM): '3.26523'
AT1G09812 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.4341'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G09812 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09810 ECT11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.9089 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09810 ECT11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.31799 x 10-1 19 10 2 4 65.52% 66.67% 29 6 TAIR8 Avg. embryo expression (dissected): '32.795'
Avg. embryo expression (LCM): '57.6062'
AT1G09810 ECT11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.32816 x 10-1 21 15 13 26 58.33% 66.67% 36 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.570992'
Avg. expression score for this sample: '24.7236'
Avg. expression score in LCM sample: '16.6527'
Tissue used: 'full endosperm'
AT1G09810 ECT11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.3449 x 10-2 31 8 79.49% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09810 ECT11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.35773 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09810 ECT11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.00028 x 10-1 17 10 3 4 62.96% 57.14% 27 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.570992'
Avg. expression score for this sample: '18.249'
Avg. expression score in LCM sample: '16.6527'
Tissue used: 'pure endosperm, no chalazal'
AT1G09800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.1501'
Avg. expression score in LCM sample: '5.12957'
Tissue used: 'pure endosperm, no chalazal'
AT1G09800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.11011 x 10-1 19 5 79.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 4 5 100.00% 55.56% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.7969'
Avg. expression score in LCM sample: '5.12957'
Tissue used: 'full endosperm'
AT1G09800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 4 0 0 55.56% 9 0 TAIR8 Avg. embryo expression (dissected): '55.5044'
Avg. embryo expression (LCM): '42.0964'
AT1G09800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.24506 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09795 ATP-PRT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-5 188 40 82.46% 228 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09795 ATP-PRT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.6707 x 10-2 128 39 76.65% 167 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09795 ATP-PRT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.46008 x 10-1 162 87 75 168 65.06% 69.14% 249 243 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.242298'
Avg. expression score for this sample: '177.269'
Avg. expression score in LCM sample: '69.3448'
Tissue used: 'pure endosperm, no chalazal'
AT1G09795 ATP-PRT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.3408 x 10-1 234 203 71 57 53.55% 44.53% 437 128 TAIR8 Avg. embryo expression (dissected): '308.82'
Avg. embryo expression (LCM): '242.833'
AT1G09795 ATP-PRT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.48747 x 10-1 239 71 118 213 77.10% 64.35% 310 331 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.242298'
Avg. expression score for this sample: '142.414'
Avg. expression score in LCM sample: '69.3448'
Tissue used: 'full endosperm'
AT1G09795 ATP-PRT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.047 x 10-3 58 47 55.24% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09790 COBL6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 107 2 98.17% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09790 COBL6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '3.55469'
Avg. embryo expression (LCM): '0'
AT1G09790 COBL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 106 0 5 380 100.00% 98.70% 106 385 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '154.544'
Avg. expression score in LCM sample: '34.5842'
Tissue used: 'full endosperm'
AT1G09790 COBL6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.03 x 10-3 642 1 99.84% 643 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09790 COBL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.137 x 10-3 19 1 3 23 95.00% 88.46% 20 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.7588'
Avg. expression score in LCM sample: '34.5842'
Tissue used: 'pure endosperm, no chalazal'
AT1G09790 COBL6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 249 4 98.42% 253 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09780 iPGAM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.71361 x 10-1 1474 493 74.94% 1967 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09780 iPGAM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.4055 x 10-1 56 30 42 96 65.12% 69.57% 86 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001124'
Avg. expression score for this sample: '178.169'
Avg. expression score in LCM sample: '322.678'
Tissue used: 'pure endosperm, no chalazal'
AT1G09780 iPGAM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7 x 10-5 94 28 47 204 77.05% 81.27% 122 251 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001124'
Avg. expression score for this sample: '173.308'
Avg. expression score in LCM sample: '322.678'
Tissue used: 'full endosperm'
AT1G09780 iPGAM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.43 x 10-4 60 4 93.75% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09780 iPGAM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.18728 x 10-1 26 24 10 17 52.00% 62.96% 50 27 TAIR8 Avg. embryo expression (dissected): '81.1011'
Avg. embryo expression (LCM): '40.2377'
AT1G09780 iPGAM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.01682 x 10-1 744 224 76.86% 968 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09770 CDC5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3784 758 83.31% 4542 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09770 CDC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.813 x 10-3 1263 490 582 1188 72.05% 67.12% 1753 1770 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-15'
Avg. expression score for this sample: '1094.6'
Avg. expression score in LCM sample: '411.336'
Tissue used: 'pure endosperm, no chalazal'
AT1G09770 CDC5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.488 x 10-3 2731 933 74.54% 3664 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09770 CDC5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.90542 x 10-1 991 980 346 323 50.28% 48.28% 1971 669 TAIR8 Avg. embryo expression (dissected): '1201.76'
Avg. embryo expression (LCM): '733.371'
AT1G09770 CDC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7 x 10-15 2297 791 979 2486 74.38% 71.75% 3088 3465 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-15'
Avg. expression score for this sample: '1289.58'
Avg. expression score in LCM sample: '411.336'
Tissue used: 'full endosperm'
AT1G09770 CDC5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.68447 x 10-1 381 133 74.12% 514 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09760 U2A' endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.68929 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09760 U2A' embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 45 44 14 11 50.56% 44.00% 89 25 TAIR8 Avg. embryo expression (dissected): '75.0596'
Avg. embryo expression (LCM): '93.4986'
AT1G09760 U2A' endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.17783 x 10-1 50 15 21 43 76.92% 67.19% 65 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.114568'
Avg. expression score for this sample: '51.4015'
Avg. expression score in LCM sample: '27.3528'
Tissue used: 'full endosperm'
AT1G09760 U2A' endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5961 x 10-2 119 22 84.40% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09760 U2A' endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.00252 x 10-1 79 32 71.17% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09760 U2A' endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.94059 x 10-1 37 19 10 50 66.07% 83.33% 56 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.114568'
Avg. expression score for this sample: '43.6634'
Avg. expression score in LCM sample: '27.3528'
Tissue used: 'pure endosperm, no chalazal'
AT1G09750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.96496 x 10-1 76 15 28 18 83.52% 39.13% 91 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000276'
Avg. expression score for this sample: '149.047'
Avg. expression score in LCM sample: '.925969'
Tissue used: 'pure endosperm, no chalazal'
AT1G09750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-7 30 16 82 25 65.22% 23.36% 46 107 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000276'
Avg. expression score for this sample: '82.5135'
Avg. expression score in LCM sample: '.925969'
Tissue used: 'full endosperm'
AT1G09750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6 x 10-7 862 440 226 103 66.21% 31.31% 1302 329 TAIR8 Avg. embryo expression (dissected): '2992.15'
Avg. embryo expression (LCM): '195.236'
AT1G09750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.48492 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.23077 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '19.3213'
Avg. embryo expression (LCM): '13.4879'
AT1G09740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.44505 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '12.0554'
Avg. expression score in LCM sample: '10.5237'
Tissue used: 'pure endosperm, no chalazal'
AT1G09740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 5 0 0 2 100.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.635117'
Avg. expression score for this sample: '10.98'
Avg. expression score in LCM sample: '10.5237'
Tissue used: 'full endosperm'
AT1G09740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1801 x 10-2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 43 50 18 94 46.24% 83.93% 93 112 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.457113'
Avg. expression score for this sample: '124.144'
Avg. expression score in LCM sample: '41.551'
Tissue used: 'full endosperm'
AT1G09730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.3489 x 10-1 13 26 6 6 33.33% 50.00% 39 12 TAIR8 Avg. embryo expression (dissected): '86.9663'
Avg. embryo expression (LCM): '58.7867'
AT1G09730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.40884 x 10-1 75 23 76.53% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.04227 x 10-1 20 7 5 31 74.07% 86.11% 27 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.457113'
Avg. expression score for this sample: '80.9619'
Avg. expression score in LCM sample: '41.551'
Tissue used: 'pure endosperm, no chalazal'
AT1G09730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-7 123 11 91.79% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09720 NET2B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0171 x 10-2 11 10 52.38% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09720 NET2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '1.02158'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G09720 NET2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 5 0 0 1 100.00% 100.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230769'
Avg. expression score for this sample: '.964568'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G09720 NET2B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09720 NET2B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.51515 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09720 NET2B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.104245'
Avg. embryo expression (LCM): '.904218'
AT1G09710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 3 4 40.00% 57.14% 5 7 TAIR8 Avg. embryo expression (dissected): '22.5458'
Avg. embryo expression (LCM): '25.9335'
AT1G09710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.461 x 10-3 70 7 90.91% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 3 6 7 78.57% 53.85% 14 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.622315'
Avg. expression score for this sample: '19.167'
Avg. expression score in LCM sample: '35.8629'
Tissue used: 'pure endosperm, no chalazal'
AT1G09710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.01824 x 10-1 19 4 82.61% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G09710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.48985 x 10-1 26 10 6 17 72.22% 73.91% 36 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.622315'
Avg. expression score for this sample: '22.5007'
Avg. expression score in LCM sample: '35.8629'
Tissue used: 'full endosperm'
AT1G09700 HYL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.43 x 10-4 308 25 85 60 92.49% 41.38% 333 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016981'
Avg. expression score for this sample: '197.279'
Avg. expression score in LCM sample: '85.4831'
Tissue used: 'full endosperm'
AT1G09700 HYL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7 x 10-4 16 21 43.24% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'