Displaying data sets 163101 - 163200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G10590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.00147 x 10-1 105 36 55 126 74.47% 69.61% 141 181 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.954889'
Avg. expression score for this sample: '1113.61'
Avg. expression score in LCM sample: '666.168'
Tissue used: 'full endosperm'
AT1G10590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.92594 x 10-1 23 14 62.16% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2821 x 10-2 156 55 73.93% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 140 142 35 35 49.65% 50.00% 282 70 TAIR8 Avg. embryo expression (dissected): '2900.43'
Avg. embryo expression (LCM): '1843.13'
AT1G10588 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.977512'
Avg. embryo expression (LCM): '0'
AT1G10588 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10588 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.21837'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G10588 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10588 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G10588 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10586 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10586 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10586 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10586 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G10586 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G10586 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G10585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G10585 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G10585 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10585 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10585 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G10580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1057.39'
Avg. embryo expression (LCM): '884.136'
AT1G10580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '821.651'
Avg. expression score in LCM sample: '447.111'
Tissue used: 'pure endosperm, no chalazal'
AT1G10580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '857.49'
Avg. expression score in LCM sample: '447.111'
Tissue used: 'full endosperm'
AT1G10570 OTS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9885 x 10-2 39 4 10 27 90.70% 72.97% 43 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012614'
Avg. expression score for this sample: '45.966'
Avg. expression score in LCM sample: '25.2363'
Tissue used: 'full endosperm'
AT1G10570 OTS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7091 x 10-2 29 18 61.70% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10570 OTS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1841 x 10-1 68 8 89.47% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10570 OTS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 6 3 3 4 66.67% 57.14% 9 7 TAIR8 Avg. embryo expression (dissected): '35.1802'
Avg. embryo expression (LCM): '29.3996'
AT1G10570 OTS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.15252 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10570 OTS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.81987 x 10-1 17 9 3 23 65.38% 88.46% 26 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012614'
Avg. expression score for this sample: '37.4221'
Avg. expression score in LCM sample: '25.2363'
Tissue used: 'pure endosperm, no chalazal'
AT1G10560 PUB18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040741'
Avg. expression score for this sample: '17.9806'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G10560 PUB18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10560 PUB18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0741 x 10-2 7 0 0 7 100.00% 100.00% 7 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040741'
Avg. expression score for this sample: '28.6741'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G10560 PUB18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10560 PUB18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10560 PUB18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '5.09078'
Avg. embryo expression (LCM): '0'
AT1G10550 XTH33 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.272859'
Avg. embryo expression (LCM): '0'
AT1G10550 XTH33 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10550 XTH33 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10550 XTH33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.168582'
Avg. expression score for this sample: '2.67397'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G10550 XTH33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.10777 x 10-1 2 0 1 8 100.00% 88.89% 2 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.168582'
Avg. expression score for this sample: '3.37641'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G10550 XTH33 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.72499 x 10-1 41 8 83.67% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10540 NAT8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 709 5 99.30% 714 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10540 NAT8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.55274 x 10-1 364 537 120 847 40.40% 87.59% 901 967 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003939'
Avg. expression score for this sample: '399.053'
Avg. expression score in LCM sample: '207.917'
Tissue used: 'full endosperm'
AT1G10540 NAT8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 713 11 98.48% 724 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10540 NAT8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.36531 x 10-1 12 7 8 8 63.16% 50.00% 19 16 TAIR8 Avg. embryo expression (dissected): '17.6096'
Avg. embryo expression (LCM): '1.94658'
AT1G10540 NAT8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5 x 10-13 206 21 90.75% 227 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10540 NAT8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.5 x 10-8 255 361 110 1142 41.40% 91.21% 616 1252 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003939'
Avg. expression score for this sample: '460.535'
Avg. expression score in LCM sample: '207.917'
Tissue used: 'pure endosperm, no chalazal'
AT1G10530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.04113'
Avg. expression score in LCM sample: '4.43877'
Tissue used: 'pure endosperm, no chalazal'
AT1G10530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.78631'
Avg. expression score in LCM sample: '4.43877'
Tissue used: 'full endosperm'
AT1G10530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.16947'
Avg. embryo expression (LCM): '0'
AT1G10522 PRIN2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.2571 x 10-2 80 47 4 11 62.99% 73.33% 127 15 TAIR8 Avg. embryo expression (dissected): '224.897'
Avg. embryo expression (LCM): '284.364'
AT1G10522 PRIN2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.07424 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10522 PRIN2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1575 x 10-2 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10522 PRIN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.04753 x 10-1 24 16 5 4 60.00% 44.44% 40 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.350363'
Avg. expression score for this sample: '70.7693'
Avg. expression score in LCM sample: '39.1552'
Tissue used: 'pure endosperm, no chalazal'
AT1G10522 PRIN2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.78216 x 10-1 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10522 PRIN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 4 1 2 55.56% 66.67% 9 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.350363'
Avg. expression score for this sample: '30.5715'
Avg. expression score in LCM sample: '39.1552'
Tissue used: 'full endosperm'
AT1G10520 Pol{lambda} endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 4 3 75.00% 42.86% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '20.5019'
Avg. expression score in LCM sample: '9.33318'
Tissue used: 'full endosperm'
AT1G10520 Pol{lambda} endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10520 Pol{lambda} endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.85714 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10520 Pol{lambda} embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 1 3 50.00% 75.00% 6 4 TAIR8 Avg. embryo expression (dissected): '32.0395'
Avg. embryo expression (LCM): '38.2534'
AT1G10520 Pol{lambda} endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10520 Pol{lambda} endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 1 2 40.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '12.6135'
Avg. expression score in LCM sample: '9.33318'
Tissue used: 'pure endosperm, no chalazal'
AT1G10510 emb2004 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340644'
Avg. expression score for this sample: '8.48601'
Avg. expression score in LCM sample: '5.51172'
Tissue used: 'pure endosperm, no chalazal'
AT1G10510 emb2004 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.51927 x 10-1 3 9 25.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10510 emb2004 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.03373 x 10-1 7 0 10 1 100.00% 9.09% 7 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340644'
Avg. expression score for this sample: '15.5688'
Avg. expression score in LCM sample: '5.51172'
Tissue used: 'full endosperm'
AT1G10510 emb2004 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7619 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10510 emb2004 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.636 x 10-3 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10510 emb2004 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 9 1 1 0 90.00% 0.00% 10 1 TAIR8 Avg. embryo expression (dissected): '28.1952'
Avg. embryo expression (LCM): '35.3398'
AT1G10500 CPISCA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 10 4 3 2 71.43% 40.00% 14 5 TAIR8 Avg. embryo expression (dissected): '60.7257'
Avg. embryo expression (LCM): '49.0412'
AT1G10500 CPISCA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.1384 x 10-2 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10500 CPISCA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2029 x 10-2 77 3 96.25% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10500 CPISCA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.5912 x 10-2 18 1 3 11 94.74% 78.57% 19 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000011'
Avg. expression score for this sample: '72.4547'
Avg. expression score in LCM sample: '17.3876'
Tissue used: 'pure endosperm, no chalazal'
AT1G10500 CPISCA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.08 x 10-4 40 6 7 61 86.96% 89.71% 46 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000011'
Avg. expression score for this sample: '171.253'
Avg. expression score in LCM sample: '17.3876'
Tissue used: 'full endosperm'
AT1G10500 CPISCA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.91976 x 10-1 38 6 86.36% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.76 x 10-4 219 31 87.60% 250 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0003 73 37 43 222 66.36% 83.77% 110 265 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000474'
Avg. expression score for this sample: '41.2935'
Avg. expression score in LCM sample: '9.24499'
Tissue used: 'full endosperm'
AT1G10490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-5 288 34 89.44% 322 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.78317 x 10-1 21 21 6 15 50.00% 71.43% 42 21 TAIR8 Avg. embryo expression (dissected): '21.371'
Avg. embryo expression (LCM): '38.1781'
AT1G10490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.46622 x 10-1 38 7 84.44% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.25813 x 10-1 25 11 11 29 69.44% 72.50% 36 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000474'
Avg. expression score for this sample: '13.0714'
Avg. expression score in LCM sample: '9.24499'
Tissue used: 'pure endosperm, no chalazal'
AT1G10480 ZFP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G10480 ZFP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G10480 ZFP5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10480 ZFP5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10480 ZFP5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10480 ZFP5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G10470 ARR4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.31534'
Avg. embryo expression (LCM): '2.96382'
AT1G10470 ARR4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10470 ARR4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10470 ARR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.22091'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G10470 ARR4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G10470 ARR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.28062'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'