Displaying data sets 162601 - 162700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G11340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.39782'
Avg. expression score in LCM sample: '1.63147'
Tissue used: 'pure endosperm, no chalazal'
AT1G11340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.8412'
Avg. expression score in LCM sample: '1.63147'
Tissue used: 'full endosperm'
AT1G11340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.2727'
Avg. embryo expression (LCM): '0'
AT1G11330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 2 6 1 2 25.00% 66.67% 8 3 TAIR8 Avg. embryo expression (dissected): '132.824'
Avg. embryo expression (LCM): '73.3798'
AT1G11330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 2 2 5 60.00% 71.43% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.715987'
Avg. expression score for this sample: '31.7613'
Avg. expression score in LCM sample: '2.57214'
Tissue used: 'full endosperm'
AT1G11330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.96 x 10-4 55 2 96.49% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.04653 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85714 x 10-1 1 3 0 0 25.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.715987'
Avg. expression score for this sample: '11.2734'
Avg. expression score in LCM sample: '2.57214'
Tissue used: 'pure endosperm, no chalazal'
AT1G11330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.378 x 10-2 24 1 96.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 6 2 6 60.00% 75.00% 15 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.5913'
Avg. expression score in LCM sample: '9.59774'
Tissue used: 'full endosperm'
AT1G11320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 3 8 1 1 27.27% 50.00% 11 2 TAIR8 Avg. embryo expression (dissected): '29.1549'
Avg. embryo expression (LCM): '19.6793'
AT1G11320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 5 70.59% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.1187'
Avg. expression score in LCM sample: '9.59774'
Tissue used: 'pure endosperm, no chalazal'
AT1G11310 MLO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.33007 x 10-1 106 28 27 16 79.10% 37.21% 134 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.135349'
Avg. expression score for this sample: '45.381'
Avg. expression score in LCM sample: '14.1394'
Tissue used: 'pure endosperm, no chalazal'
AT1G11310 MLO2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.82186 x 10-1 9 6 60.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11310 MLO2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-15 254 13 95.13% 267 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11310 MLO2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0258 x 10-1 67 19 33 84 77.91% 71.79% 86 117 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.135349'
Avg. expression score for this sample: '38.4136'
Avg. expression score in LCM sample: '14.1394'
Tissue used: 'full endosperm'
AT1G11310 MLO2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2305 x 10-2 21 1 95.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11310 MLO2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.41597 x 10-1 432 359 211 115 54.61% 35.28% 791 326 TAIR8 Avg. embryo expression (dissected): '416.946'
Avg. embryo expression (LCM): '185.729'
AT1G11300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.9499'
Avg. embryo expression (LCM): '4.44574'
AT1G11300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.69787'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'full endosperm'
AT1G11300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.25059'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'pure endosperm, no chalazal'
AT1G11300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11290 CRR22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11290 CRR22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11290 CRR22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.253'
Avg. expression score in LCM sample: '16.3441'
Tissue used: 'full endosperm'
AT1G11290 CRR22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '26.2708'
Avg. embryo expression (LCM): '31.5346'
AT1G11290 CRR22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11290 CRR22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.07674'
Avg. expression score in LCM sample: '16.3441'
Tissue used: 'pure endosperm, no chalazal'
AT1G11280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.27669 x 10-1 21 15 12 24 58.33% 66.67% 36 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53299'
Avg. expression score for this sample: '14.6897'
Avg. expression score in LCM sample: '6.55527'
Tissue used: 'pure endosperm, no chalazal'
AT1G11280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.87373 x 10-1 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-5 48 4 92.31% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.21127 x 10-1 23 14 12 19 62.16% 61.29% 37 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53299'
Avg. expression score for this sample: '15.3152'
Avg. expression score in LCM sample: '6.55527'
Tissue used: 'full endosperm'
AT1G11280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.521 x 10-3 21 2 91.30% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.55129 x 10-1 52 84 12 28 38.24% 70.00% 136 40 TAIR8 Avg. embryo expression (dissected): '52.8426'
Avg. embryo expression (LCM): '45.2737'
AT1G11270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.2034'
Avg. embryo expression (LCM): '44.3569'
AT1G11270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '57.6862'
Avg. expression score in LCM sample: '47.5919'
Tissue used: 'full endosperm'
AT1G11270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '95.0226'
Avg. expression score in LCM sample: '47.5919'
Tissue used: 'pure endosperm, no chalazal'
AT1G11270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11260 STP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.41513 x 10-1 346 0 100.00% 346 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11260 STP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0254 x 10-1 609 7 98.86% 616 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11260 STP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 142 5 5 1617 96.60% 99.69% 147 1622 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '947.896'
Avg. expression score in LCM sample: '3.86555'
Tissue used: 'full endosperm'
AT1G11260 STP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 7 2 0 3 77.78% 100.00% 9 3 TAIR8 Avg. embryo expression (dissected): '70.953'
Avg. embryo expression (LCM): '13.8772'
AT1G11260 STP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.72234 x 10-1 1176 10 99.16% 1186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11260 STP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.5 x 10-7 67 2 1 17 97.10% 94.44% 69 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '456.225'
Avg. expression score in LCM sample: '3.86555'
Tissue used: 'pure endosperm, no chalazal'
AT1G11250 SYP125 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.45534'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G11250 SYP125 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11250 SYP125 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11250 SYP125 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.606463'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G11250 SYP125 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.25 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11250 SYP125 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G11240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.85487 x 10-1 1392 1522 633 663 47.77% 51.16% 2914 1296 TAIR8 Avg. embryo expression (dissected): '2388.12'
Avg. embryo expression (LCM): '1702.62'
AT1G11240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5 x 10-9 1920 851 984 2703 69.29% 73.31% 2771 3687 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000191'
Avg. expression score for this sample: '1527.93'
Avg. expression score in LCM sample: '241.839'
Tissue used: 'full endosperm'
AT1G11240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.7 x 10-12 3622 1242 74.47% 4864 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0 x 10-30 6107 1860 76.65% 7967 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.27789 x 10-1 1156 713 661 1396 61.85% 67.87% 1869 2057 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000191'
Avg. expression score for this sample: '1382.77'
Avg. expression score in LCM sample: '241.839'
Tissue used: 'pure endosperm, no chalazal'
AT1G11240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.035 x 10-3 556 191 74.43% 747 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.661528'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G11230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G11230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G11220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.26793 x 10-1 20 8 7 1 71.43% 12.50% 28 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.708985'
Avg. expression score for this sample: '25.9692'
Avg. expression score in LCM sample: '14.8155'
Tissue used: 'pure endosperm, no chalazal'
AT1G11220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6121 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 11 2 7 6 84.62% 46.15% 13 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.708985'
Avg. expression score for this sample: '10.043'
Avg. expression score in LCM sample: '14.8155'
Tissue used: 'full endosperm'
AT1G11220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.337 x 10-2 33 11 7 4 75.00% 36.36% 44 11 TAIR8 Avg. embryo expression (dissected): '78.591'
Avg. embryo expression (LCM): '79.4204'
AT1G11210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.37986 x 10-1 6 4 3 5 60.00% 62.50% 10 8 TAIR8 Avg. embryo expression (dissected): '10.942'
Avg. embryo expression (LCM): '1.04236'
AT1G11210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.153 x 10-3 55 30 32 178 64.71% 84.76% 85 210 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007161'
Avg. expression score for this sample: '65.4718'
Avg. expression score in LCM sample: '12.1405'
Tissue used: 'full endosperm'
AT1G11210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.1785 x 10-2 42 6 87.50% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.58 x 10-4 59 4 93.65% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 65 11 35 30 85.53% 46.15% 76 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007161'
Avg. expression score for this sample: '48.6174'
Avg. expression score in LCM sample: '12.1405'
Tissue used: 'pure endosperm, no chalazal'
AT1G11210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.33373 x 10-1 25 7 78.12% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.3445 x 10-2 23 4 85.19% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5 x 10-5 38 1 97.44% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.99328 x 10-1 30 13 20 53 69.77% 72.60% 43 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.907484'
Avg. expression score for this sample: '46.2402'
Avg. expression score in LCM sample: '29.4252'
Tissue used: 'full endosperm'
AT1G11200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.89073 x 10-1 10 12 0 5 45.45% 100.00% 22 5 TAIR8 Avg. embryo expression (dissected): '40.6744'
Avg. embryo expression (LCM): '43.7164'
AT1G11200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8 x 10-6 58 3 95.08% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.4156 x 10-1 10 13 8 21 43.48% 72.41% 23 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.907484'
Avg. expression score for this sample: '36.6746'
Avg. expression score in LCM sample: '29.4252'
Tissue used: 'pure endosperm, no chalazal'
AT1G11190 BFN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 2 8 1 88.24% 11.11% 17 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.378241'
Avg. expression score for this sample: '1425.46'
Avg. expression score in LCM sample: '420.61'
Tissue used: 'pure endosperm, no chalazal'
AT1G11190 BFN1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.918 x 10-3 7 15 31.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11190 BFN1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2475 x 10-1 19 5 79.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11190 BFN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.04849 x 10-1 145 29 66 16 83.33% 19.51% 174 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.378241'
Avg. expression score for this sample: '1201.3'
Avg. expression score in LCM sample: '420.61'
Tissue used: 'full endosperm'
AT1G11190 BFN1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.41119 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11190 BFN1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '164.339'
Avg. embryo expression (LCM): '8.92915'
AT1G11185 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G11185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.20324'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G11185 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G11185 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'