Displaying data sets 161601 - 161700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G12780 UGE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 1 2 100.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.4e-28'
Avg. expression score for this sample: '77.8185'
Avg. expression score in LCM sample: '38.4057'
Tissue used: 'pure endosperm, no chalazal'
AT1G12780 UGE1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.8269 x 10-2 43 3 93.48% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12780 UGE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4737 x 10-2 217 0 100.00% 217 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12780 UGE1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12775 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.12821 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12775 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0304 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12775 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12775 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 4 2 0 50.00% 0.00% 8 2 TAIR8 Avg. embryo expression (dissected): '29.3095'
Avg. embryo expression (LCM): '22.3543'
AT1G12775 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 2 2 75.00% 50.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.5787'
Avg. expression score in LCM sample: '21.797'
Tissue used: 'pure endosperm, no chalazal'
AT1G12775 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.07985 x 10-1 7 2 2 6 77.78% 75.00% 9 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '32.2226'
Avg. expression score in LCM sample: '21.797'
Tissue used: 'full endosperm'
AT1G12770 EMB1586 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.27131 x 10-1 20 0 4 7 100.00% 63.64% 20 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180344'
Avg. expression score for this sample: '108.67'
Avg. expression score in LCM sample: '50.4873'
Tissue used: 'full endosperm'
AT1G12770 EMB1586 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 4 2 1 73.33% 33.33% 15 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.180344'
Avg. expression score for this sample: '106.999'
Avg. expression score in LCM sample: '50.4873'
Tissue used: 'pure endosperm, no chalazal'
AT1G12770 EMB1586 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2941 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12770 EMB1586 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.9892 x 10-2 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12770 EMB1586 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.89855 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12770 EMB1586 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.70223 x 10-1 26 10 5 1 72.22% 16.67% 36 6 TAIR8 Avg. embryo expression (dissected): '350.321'
Avg. embryo expression (LCM): '326.875'
AT1G12760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.78541 x 10-1 67 124 35 58 35.08% 62.37% 191 93 TAIR8 Avg. embryo expression (dissected): '121.283'
Avg. embryo expression (LCM): '52.1307'
AT1G12760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.79434 x 10-1 108 54 40 132 66.67% 76.74% 162 172 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057249'
Avg. expression score for this sample: '97.1405'
Avg. expression score in LCM sample: '49.6202'
Tissue used: 'pure endosperm, no chalazal'
AT1G12760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.25206 x 10-1 144 80 54 179 64.29% 76.82% 224 233 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057249'
Avg. expression score for this sample: '114.747'
Avg. expression score in LCM sample: '49.6202'
Tissue used: 'full endosperm'
AT1G12760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.6 x 10-6 114 13 89.76% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.091 x 10-3 131 29 81.88% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8 x 10-7 97 7 93.27% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12750 RBL6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0 x 10-6 2 13 13.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12750 RBL6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.965 x 10-3 24 0 100.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12750 RBL6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1844 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12750 RBL6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.197 x 10-3 76 27 10 12 73.79% 54.55% 103 22 TAIR8 Avg. embryo expression (dissected): '86.8824'
Avg. embryo expression (LCM): '45.6881'
AT1G12750 RBL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.22883 x 10-1 95 23 28 52 80.51% 65.00% 118 80 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.041568'
Avg. expression score for this sample: '61.8563'
Avg. expression score in LCM sample: '10.9059'
Tissue used: 'full endosperm'
AT1G12750 RBL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.60405 x 10-1 39 8 5 8 82.98% 61.54% 47 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.041568'
Avg. expression score for this sample: '30.0322'
Avg. expression score in LCM sample: '10.9059'
Tissue used: 'pure endosperm, no chalazal'
AT1G12740 CYP87A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.682678'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G12740 CYP87A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.467007'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G12740 CYP87A2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12740 CYP87A2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12740 CYP87A2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12740 CYP87A2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '1.80755'
Avg. embryo expression (LCM): '.665605'
AT1G12730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 3 10 0 3 23.08% 100.00% 13 3 TAIR8 Avg. embryo expression (dissected): '21.3859'
Avg. embryo expression (LCM): '27.2396'
AT1G12730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 4 6 13 63.64% 68.42% 11 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.6085'
Avg. expression score in LCM sample: '11.1998'
Tissue used: 'full endosperm'
AT1G12730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 2 3 80.00% 60.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.99423'
Avg. expression score in LCM sample: '11.1998'
Tissue used: 'pure endosperm, no chalazal'
AT1G12730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-5 76 2 97.44% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1841 x 10-2 31 3 91.18% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12710 PP2-A12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12710 PP2-A12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12710 PP2-A12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12710 PP2-A12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.31229'
Avg. embryo expression (LCM): '3.95595'
AT1G12710 PP2-A12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.91716'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'pure endosperm, no chalazal'
AT1G12710 PP2-A12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.777'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'full endosperm'
AT1G12700 RPF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.79168 x 10-1 6 3 6 1 66.67% 14.29% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.747527'
Avg. expression score for this sample: '11.7122'
Avg. expression score in LCM sample: '2.95428'
Tissue used: 'full endosperm'
AT1G12700 RPF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.747527'
Avg. expression score for this sample: '4.99182'
Avg. expression score in LCM sample: '2.95428'
Tissue used: 'pure endosperm, no chalazal'
AT1G12700 RPF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.4472 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12700 RPF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5462 x 10-2 23 4 85.19% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12700 RPF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.26987 x 10-1 3 6 33.33% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12700 RPF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 7 4 8 0 63.64% 0.00% 11 8 TAIR8 Avg. embryo expression (dissected): '13.6828'
Avg. embryo expression (LCM): '9.10497'
AT1G12680 PEPKR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 6 8 4 3 42.86% 42.86% 14 7 TAIR8 Avg. embryo expression (dissected): '175.633'
Avg. embryo expression (LCM): '71.609'
AT1G12680 PEPKR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.39669 x 10-1 21 17 3 12 55.26% 80.00% 38 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.200568'
Avg. expression score for this sample: '162.567'
Avg. expression score in LCM sample: '67.8162'
Tissue used: 'pure endosperm, no chalazal'
AT1G12680 PEPKR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7584 x 10-2 22 9 1 31 70.97% 96.88% 31 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.200568'
Avg. expression score for this sample: '219.719'
Avg. expression score in LCM sample: '67.8162'
Tissue used: 'full endosperm'
AT1G12680 PEPKR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.67919 x 10-1 29 8 78.38% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12680 PEPKR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.85 x 10-4 41 1 97.62% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12680 PEPKR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.12523 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12665 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12665 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 616 155 79.90% 771 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12665 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.05552 x 10-1 166 132 55.70% 298 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12665 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G12665 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.04987'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G12665 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G12663 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G12663 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.96606'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G12663 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G12663 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12663 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12663 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G12660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.497054'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G12660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G12650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 38 20 20 42 65.52% 67.74% 58 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.799866'
Avg. expression score for this sample: '66.8518'
Avg. expression score in LCM sample: '20.9298'
Tissue used: 'pure endosperm, no chalazal'
AT1G12650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.47279 x 10-1 32 36 26 104 47.06% 80.00% 68 130 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.799866'
Avg. expression score for this sample: '84.6674'
Avg. expression score in LCM sample: '20.9298'
Tissue used: 'full endosperm'
AT1G12650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.68182 x 10-1 20 4 83.33% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.77365 x 10-1 145 77 65.32% 222 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.0219 x 10-2 121 38 76.10% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.96928 x 10-1 33 62 9 17 34.74% 65.38% 95 26 TAIR8 Avg. embryo expression (dissected): '87.585'
Avg. embryo expression (LCM): '68.3689'
AT1G12640 LPLAT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.42237 x 10-1 21 26 8 19 44.68% 70.37% 47 27 TAIR8 Avg. embryo expression (dissected): '36.7089'
Avg. embryo expression (LCM): '32.3258'
AT1G12640 LPLAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7 x 10-11 133 35 23 220 79.17% 90.53% 168 243 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.6e-09'
Avg. expression score for this sample: '99.8783'
Avg. expression score in LCM sample: '31.2478'
Tissue used: 'full endosperm'
AT1G12640 LPLAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.86388 x 10-1 49 27 19 71 64.47% 78.89% 76 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.6e-09'
Avg. expression score for this sample: '54.2776'
Avg. expression score in LCM sample: '31.2478'
Tissue used: 'pure endosperm, no chalazal'
AT1G12640 LPLAT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9 x 10-6 462 43 91.49% 505 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12640 LPLAT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.00346 x 10-1 67 9 88.16% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12640 LPLAT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.97284 x 10-1 338 61 84.71% 399 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.495428'
Avg. embryo expression (LCM): '0'
AT1G12630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.0606 x 10-2 0 5 1 0 0.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060606'
Avg. expression score for this sample: '3.50752'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G12630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060606'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G12620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.17168 x 10-1 169 54 82 147 75.78% 64.19% 223 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.612127'
Avg. expression score for this sample: '101.229'
Avg. expression score in LCM sample: '39.1112'
Tissue used: 'full endosperm'
AT1G12620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.1198 x 10-2 123 70 94 128 63.73% 57.66% 193 222 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.612127'
Avg. expression score for this sample: '83.6251'
Avg. expression score in LCM sample: '39.1112'
Tissue used: 'pure endosperm, no chalazal'
AT1G12620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2379 x 10-2 36 8 81.82% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0 x 10-13 129 9 93.48% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-22 199 9 95.67% 208 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.13419 x 10-1 133 91 38 21 59.38% 35.59% 224 59 TAIR8 Avg. embryo expression (dissected): '102.659'
Avg. embryo expression (LCM): '80.4126'