Displaying data sets 161501 - 161600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G12930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-5 73 9 89.02% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.36552 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12920 ERF1-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12920 ERF1-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '267.45'
Avg. expression score in LCM sample: '154.622'
Tissue used: 'pure endosperm, no chalazal'
AT1G12920 ERF1-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12920 ERF1-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12920 ERF1-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '460.753'
Avg. expression score in LCM sample: '154.622'
Tissue used: 'full endosperm'
AT1G12920 ERF1-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '387.811'
Avg. embryo expression (LCM): '562.637'
AT1G12910 ATAN11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.15904 x 10-1 131 160 35 40 45.02% 53.33% 291 75 TAIR8 Avg. embryo expression (dissected): '635.84'
Avg. embryo expression (LCM): '463.06'
AT1G12910 ATAN11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.27795 x 10-1 260 111 70.08% 371 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12910 ATAN11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6 x 10-6 259 64 80.19% 323 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12910 ATAN11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 92 65 33 107 58.60% 76.43% 157 140 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.915889'
Avg. expression score for this sample: '296.654'
Avg. expression score in LCM sample: '294.164'
Tissue used: 'full endosperm'
AT1G12910 ATAN11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.9332 x 10-2 83 26 76.15% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12910 ATAN11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.42148 x 10-1 144 93 80 191 60.76% 70.48% 237 271 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.915889'
Avg. expression score for this sample: '488.857'
Avg. expression score in LCM sample: '294.164'
Tissue used: 'pure endosperm, no chalazal'
AT1G12900 GAPA-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1267.06'
Avg. expression score in LCM sample: '505.976'
Tissue used: 'pure endosperm, no chalazal'
AT1G12900 GAPA-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12900 GAPA-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2876.57'
Avg. embryo expression (LCM): '1700.78'
AT1G12900 GAPA-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12900 GAPA-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12900 GAPA-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1050.9'
Avg. expression score in LCM sample: '505.976'
Tissue used: 'full endosperm'
AT1G12890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.63989'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G12890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.1735'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G12890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.881096'
Avg. embryo expression (LCM): '0'
AT1G12880 NUDT12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.49385'
Avg. embryo expression (LCM): '1.25586'
AT1G12880 NUDT12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 32 0 100.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12880 NUDT12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12880 NUDT12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12880 NUDT12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.8 x 10-10 59 0 0 24 100.00% 100.00% 59 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.2e-12'
Avg. expression score for this sample: '106.675'
Avg. expression score in LCM sample: '1.46979'
Tissue used: 'full endosperm'
AT1G12880 NUDT12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9656 x 10-2 18 0 0 1 100.00% 100.00% 18 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.2e-12'
Avg. expression score for this sample: '22.9552'
Avg. expression score in LCM sample: '1.46979'
Tissue used: 'pure endosperm, no chalazal'
AT1G12870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G12870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G12870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G12870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12860 SCRM2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5 x 10-12 151 27 84.83% 178 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12860 SCRM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-14 305 740 230 892 29.19% 79.50% 1045 1122 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.1e-11'
Avg. expression score for this sample: '151.945'
Avg. expression score in LCM sample: '174.699'
Tissue used: 'full endosperm'
AT1G12860 SCRM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.4669 x 10-2 514 629 357 1271 44.97% 78.07% 1143 1628 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.1e-11'
Avg. expression score for this sample: '307.183'
Avg. expression score in LCM sample: '174.699'
Tissue used: 'pure endosperm, no chalazal'
AT1G12860 SCRM2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.545 x 10-2 41 44 48.24% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12860 SCRM2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.845 x 10-3 23 3 88.46% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12860 SCRM2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.965 x 10-3 198 372 95 143 34.74% 60.08% 570 238 TAIR8 Avg. embryo expression (dissected): '149.137'
Avg. embryo expression (LCM): '65.2669'
AT1G12850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.48416 x 10-1 62 34 13 8 64.58% 38.10% 96 21 TAIR8 Avg. embryo expression (dissected): '43.1013'
Avg. embryo expression (LCM): '52.1307'
AT1G12850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.8 x 10-14 314 27 92.08% 341 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-7 112 9 92.56% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.69694 x 10-1 95 30 38 72 76.00% 65.45% 125 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.298864'
Avg. expression score for this sample: '46.0868'
Avg. expression score in LCM sample: '25.3392'
Tissue used: 'full endosperm'
AT1G12850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.4016 x 10-1 20 11 64.52% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.8847 x 10-1 61 15 24 29 80.26% 54.72% 76 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.298864'
Avg. expression score for this sample: '30.5032'
Avg. expression score in LCM sample: '25.3392'
Tissue used: 'pure endosperm, no chalazal'
AT1G12845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.451481'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G12845 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12845 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '13.3404'
Avg. embryo expression (LCM): '0'
AT1G12845 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12845 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.80182'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G12840 DET3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.2375 x 10-2 43 9 13 37 82.69% 74.00% 52 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015899'
Avg. expression score for this sample: '92.7205'
Avg. expression score in LCM sample: '53.6327'
Tissue used: 'full endosperm'
AT1G12840 DET3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.47129 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12840 DET3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.65322 x 10-1 13 1 2 7 92.86% 77.78% 14 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015899'
Avg. expression score for this sample: '56.3946'
Avg. expression score in LCM sample: '53.6327'
Tissue used: 'pure endosperm, no chalazal'
AT1G12840 DET3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.796 x 10-2 92 11 89.32% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12840 DET3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1221 x 10-1 52 15 77.61% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12840 DET3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 5 0 1 54.55% 100.00% 11 1 TAIR8 Avg. embryo expression (dissected): '59.9662'
Avg. embryo expression (LCM): '67.0377'
AT1G12830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08145 x 10-1 122 105 25 22 53.74% 46.81% 227 47 TAIR8 Avg. embryo expression (dissected): '1095.96'
Avg. embryo expression (LCM): '1052.46'
AT1G12830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.23699 x 10-1 557 175 76.09% 732 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0005 515 256 66.80% 771 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.5 x 10-5 35 33 51.47% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.331 x 10-3 160 51 82 254 75.83% 75.60% 211 336 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000298'
Avg. expression score for this sample: '621.502'
Avg. expression score in LCM sample: '193.307'
Tissue used: 'full endosperm'
AT1G12830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.1228 x 10-2 161 38 52 82 80.90% 61.19% 199 134 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000298'
Avg. expression score for this sample: '704.045'
Avg. expression score in LCM sample: '193.307'
Tissue used: 'pure endosperm, no chalazal'
AT1G12820 AFB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 2 4 66.67% 0 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.09616'
Avg. expression score for this sample: '214.484'
Avg. expression score in LCM sample: '95.7863'
Tissue used: 'pure endosperm, no chalazal'
AT1G12820 AFB3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.76539 x 10-1 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12820 AFB3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 6 5 0 2 54.55% 100.00% 11 2 TAIR8 Avg. embryo expression (dissected): '291.186'
Avg. embryo expression (LCM): '151.268'
AT1G12820 AFB3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4464 x 10-2 28 1 96.55% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12820 AFB3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.6133 x 10-2 23 4 5 20 85.19% 80.00% 27 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.09616'
Avg. expression score for this sample: '344.761'
Avg. expression score in LCM sample: '95.7863'
Tissue used: 'full endosperm'
AT1G12820 AFB3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.5046 x 10-2 90 28 76.27% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1739 x 10-2 567 233 157 380 70.88% 70.76% 800 537 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.539744'
Avg. expression score for this sample: '561.903'
Avg. expression score in LCM sample: '97.991'
Tissue used: 'full endosperm'
AT1G12810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.90298 x 10-1 523 135 338 323 79.48% 48.87% 658 661 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.539744'
Avg. expression score for this sample: '708.566'
Avg. expression score in LCM sample: '97.991'
Tissue used: 'pure endosperm, no chalazal'
AT1G12810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-8 166 27 86.01% 193 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5514 x 10-2 144 49 74.61% 193 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.5 x 10-7 273 123 35 42 68.94% 54.55% 396 77 TAIR8 Avg. embryo expression (dissected): '418.356'
Avg. embryo expression (LCM): '172.366'
AT1G12805 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 17 16 5 4 51.52% 44.44% 33 9 TAIR8 Avg. embryo expression (dissected): '89.2166'
Avg. embryo expression (LCM): '161.189'
AT1G12805 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.06067 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12805 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12805 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 104 45 29 45 69.80% 60.81% 149 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.808456'
Avg. expression score for this sample: '304.24'
Avg. expression score in LCM sample: '30.9685'
Tissue used: 'full endosperm'
AT1G12805 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.6668 x 10-2 5 8 38.46% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12805 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.85282 x 10-1 36 15 23 50 70.59% 68.49% 51 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.808456'
Avg. expression score for this sample: '138.919'
Avg. expression score in LCM sample: '30.9685'
Tissue used: 'pure endosperm, no chalazal'
AT1G12800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.64356 x 10-1 17 14 13 32 54.84% 71.11% 31 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177653'
Avg. expression score for this sample: '125.254'
Avg. expression score in LCM sample: '51.3839'
Tissue used: 'pure endosperm, no chalazal'
AT1G12800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.00426 x 10-1 67 16 80.72% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.48604 x 10-1 65 94 15 15 40.88% 50.00% 159 30 TAIR8 Avg. embryo expression (dissected): '259.194'
Avg. embryo expression (LCM): '293.657'
AT1G12800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-5 77 6 92.77% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.66643 x 10-1 45 20 69.23% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8657 x 10-2 73 39 40 145 65.18% 78.38% 112 185 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177653'
Avg. expression score for this sample: '200.941'
Avg. expression score in LCM sample: '51.3839'
Tissue used: 'full endosperm'
AT1G12790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.58483 x 10-1 26 11 2 10 70.27% 83.33% 37 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.851385'
Avg. expression score for this sample: '9.5992'
Avg. expression score in LCM sample: '2.52804'
Tissue used: 'full endosperm'
AT1G12790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.15987 x 10-1 4 3 4 5 57.14% 55.56% 7 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.851385'
Avg. expression score for this sample: '4.66167'
Avg. expression score in LCM sample: '2.52804'
Tissue used: 'pure endosperm, no chalazal'
AT1G12790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6344 x 10-2 38 4 90.48% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.10438 x 10-1 19 6 76.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G12790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.6842 x 10-2 9 2 0 2 81.82% 100.00% 11 2 TAIR8 Avg. embryo expression (dissected): '5.2743'
Avg. embryo expression (LCM): '10.8004'
AT1G12780 UGE1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '15.0164'
Avg. embryo expression (LCM): '13.8144'
AT1G12780 UGE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4737 x 10-2 217 0 100.00% 217 TAIR8 Mutant effect: 'N/A (not a MEG)'