GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G136341	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	5.05 x 10^-25	648	1431	725	867	31.17%	54.46%	2079	1592	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.05e-25' Biased in favor of strain: ''
GRMZM2G136341	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.93393 x 10^-2	806	878	1072	955	47.86%	47.11%	1684	2027	RefGen V2	χ2 p-value for B73 x Mo17: '.0793393' χ2 p-value for Mo17 x B73: '.0093573' Biased in favor of strain: ''
GRMZM2G136311	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.587153 x 10^-1	151	132	146	101	53.36%	40.89%	283	247	RefGen V2	χ2 p-value for B73 x Mo17: '.2587153' χ2 p-value for Mo17 x B73: '.0041928' Biased in favor of strain: ''
GRMZM2G136311	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	4.2314 x 10^-3	61	52	95	1	53.98%	1.04%	113	96	RefGen V2	χ2 p-value for B73 x Mo17: '.0042314' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G136306	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4529 x 10^-3	260	88	175	148	74.71%	45.82%	348	323	RefGen V2	χ2 p-value for B73 x Mo17: '.0014529' χ2 p-value for Mo17 x B73: '1.90e-15' Biased in favor of strain: 'B73'
GRMZM2G136306	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.028091 x 10^-1	143	99	140	114	59.09%	44.88%	242	254	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.1028091' Biased in favor of strain: ''
GRMZM2G136296	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15 x 10^-9	1136	1454	991	1276	43.86%	56.29%	2590	2267	RefGen V2	χ2 p-value for B73 x Mo17: '4.14e-10' χ2 p-value for Mo17 x B73: '2.15e-09' Biased in favor of strain: 'Mo17'
GRMZM2G136296	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1819	1603	1002	3751	53.16%	78.92%	3422	4753	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G136268	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05 x 10^-17	244	23	174	48	91.39%	21.62%	267	222	RefGen V2	χ2 p-value for B73 x Mo17: '1.05e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G136268	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.08 x 10^-13	371	153	282	135	70.80%	32.37%	524	417	RefGen V2	χ2 p-value for B73 x Mo17: '1.68e-21' χ2 p-value for Mo17 x B73: '6.08e-13' Biased in favor of strain: 'B73'
GRMZM2G136266	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.67 x 10^-7	362	191	323	203	65.46%	38.59%	553	526	RefGen V2	χ2 p-value for B73 x Mo17: '3.55e-13' χ2 p-value for Mo17 x B73: '1.67e-07' Biased in favor of strain: 'B73'
GRMZM2G136266	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.7853 x 10^-3	254	90	118	157	73.84%	57.09%	344	275	RefGen V2	χ2 p-value for B73 x Mo17: '.0047853' χ2 p-value for Mo17 x B73: '.0007556' Biased in favor of strain: 'B73'
GRMZM2G136262	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.040354 x 10^-1	259	90	89	163	74.21%	64.68%	349	252	RefGen V2	χ2 p-value for B73 x Mo17: '.0027887' χ2 p-value for Mo17 x B73: '.5040354' Biased in favor of strain: ''
GRMZM2G136262	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.372801 x 10^-1	324	322	256	393	50.15%	60.55%	646	649	RefGen V2	χ2 p-value for B73 x Mo17: '.9372801' χ2 p-value for Mo17 x B73: '7.54e-08' Biased in favor of strain: ''
GRMZM2G136237	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	15	10	25	10	60.00%	28.57%	25	35	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0112299' Biased in favor of strain: ''
GRMZM2G136237	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.994744 x 10^-1	20	11	11	12	64.52%	52.17%	31	23	RefGen V2	χ2 p-value for B73 x Mo17: '.7994744' χ2 p-value for Mo17 x B73: '.1403686' Biased in favor of strain: ''
GRMZM2G136219	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.086764 x 10^-1	14	3	13	25	82.35%	65.79%	17	38	RefGen V2	χ2 p-value for B73 x Mo17: '.1700716' χ2 p-value for Mo17 x B73: '.9086764' Biased in favor of strain: ''
GRMZM2G136219	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.404188 x 10^-1	89	90	98	77	49.72%	44.00%	179	175	RefGen V2	χ2 p-value for B73 x Mo17: '.9404188' χ2 p-value for Mo17 x B73: '.1124106' Biased in favor of strain: ''
GRMZM2G136185	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.18 x 10^-9	0	39	0	37	0.00%	100.00%	39	37	RefGen V2	χ2 p-value for B73 x Mo17: '4.24e-10' χ2 p-value for Mo17 x B73: '1.18e-09' Biased in favor of strain: 'Mo17'
GRMZM2G136185	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	0	17	0.00%	100.00%	4	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: ''
GRMZM2G136158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	572	31	589	175	94.86%	22.91%	603	764	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G136158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1039	180	882	154	85.23%	14.86%	1219	1036	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G136146	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	4	12	10	55.56%	45.45%	9	22	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.6698154' Biased in favor of strain: ''
GRMZM2G136146	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	5	0	0.00%	0.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM2G136113	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.373512 x 10^-1	257	109	112	212	70.22%	65.43%	366	324	RefGen V2	χ2 p-value for B73 x Mo17: '.1494729' χ2 p-value for Mo17 x B73: '.6373512' Biased in favor of strain: ''
GRMZM2G136113	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.275985 x 10^-1	137	99	106	97	58.05%	47.78%	236	203	RefGen V2	χ2 p-value for B73 x Mo17: '.0133763' χ2 p-value for Mo17 x B73: '.5275985' Biased in favor of strain: ''
GRMZM2G136100	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	3	1	0.00%	25.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G136100	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G136081	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.82918 x 10^-2	85	25	65	69	77.27%	51.49%	110	134	RefGen V2	χ2 p-value for B73 x Mo17: '.0182918' χ2 p-value for Mo17 x B73: '.0001944' Biased in favor of strain: ''
GRMZM2G136081	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.253 x 10^-4	436	210	292	214	67.49%	42.29%	646	506	RefGen V2	χ2 p-value for B73 x Mo17: '6.01e-19' χ2 p-value for Mo17 x B73: '.0005253' Biased in favor of strain: 'B73'
GRMZM2G136072	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.542552 x 10^-1	94	81	76	65	53.71%	46.10%	175	141	RefGen V2	χ2 p-value for B73 x Mo17: '.3257514' χ2 p-value for Mo17 x B73: '.3542552' Biased in favor of strain: ''
GRMZM2G136072	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.306 x 10^-4	128	30	68	68	81.01%	50.00%	158	136	RefGen V2	χ2 p-value for B73 x Mo17: '.0001306' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'B73'
GRMZM2G136067	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.85 x 10^-8	17	38	91	17	30.91%	15.74%	55	108	RefGen V2	χ2 p-value for B73 x Mo17: '1.85e-08' χ2 p-value for Mo17 x B73: '3.01e-29' Biased in favor of strain: ''
GRMZM2G136067	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6 x 10^-5	340	219	268	177	60.82%	39.78%	559	445	RefGen V2	χ2 p-value for B73 x Mo17: '3.09e-07' χ2 p-value for Mo17 x B73: '.000016' Biased in favor of strain: 'B73'
GRMZM2G136058	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.892111 x 10^-1	193	147	132	121	56.76%	47.83%	340	253	RefGen V2	χ2 p-value for B73 x Mo17: '.0126064' χ2 p-value for Mo17 x B73: '.4892111' Biased in favor of strain: ''
GRMZM2G136058	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.976601 x 10^-1	233	103	133	179	69.35%	57.37%	336	312	RefGen V2	χ2 p-value for B73 x Mo17: '.2976601' χ2 p-value for Mo17 x B73: '.0004962' Biased in favor of strain: ''
GRMZM2G136016	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.89 x 10^-24	16	108	123	54	12.90%	30.51%	124	177	RefGen V2	χ2 p-value for B73 x Mo17: '5.90e-37' χ2 p-value for Mo17 x B73: '1.89e-24' Biased in favor of strain: ''
GRMZM2G136016	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.6391 x 10^-3	524	353	452	366	59.75%	44.74%	877	818	RefGen V2	χ2 p-value for B73 x Mo17: '7.73e-09' χ2 p-value for Mo17 x B73: '.0026391' Biased in favor of strain: 'B73'
GRMZM2G135990	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.03 x 10^-6	443	316	515	377	58.37%	42.26%	759	892	RefGen V2	χ2 p-value for B73 x Mo17: '4.03e-06' χ2 p-value for Mo17 x B73: '3.83e-06' Biased in favor of strain: 'B73'
GRMZM2G135990	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G135970	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15 x 10^-14	548	133	386	408	80.47%	51.39%	681	794	RefGen V2	χ2 p-value for B73 x Mo17: '2.15e-14' χ2 p-value for Mo17 x B73: '6.58e-20' Biased in favor of strain: 'B73'
GRMZM2G135970	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.2266 x 10^-3	372	225	270	335	62.31%	55.37%	597	605	RefGen V2	χ2 p-value for B73 x Mo17: '1.78e-09' χ2 p-value for Mo17 x B73: '.0082266' Biased in favor of strain: ''
GRMZM2G135968	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.724598 x 10^-1	371	232	232	220	61.53%	48.67%	603	452	RefGen V2	χ2 p-value for B73 x Mo17: '1.51e-08' χ2 p-value for Mo17 x B73: '.5724598' Biased in favor of strain: ''
GRMZM2G135968	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.495802 x 10^-1	331	138	239	461	70.58%	65.86%	469	700	RefGen V2	χ2 p-value for B73 x Mo17: '.0725395' χ2 p-value for Mo17 x B73: '.6495802' Biased in favor of strain: ''
GRMZM2G135960	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	929	3621	1763	10917	20.42%	86.10%	4550	12680	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G135960	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.97 x 10^-21	256	521	227	953	32.95%	80.76%	777	1180	RefGen V2	χ2 p-value for B73 x Mo17: '1.97e-21' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G135935	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.726813 x 10^-1	113	88	86	101	56.22%	54.01%	201	187	RefGen V2	χ2 p-value for B73 x Mo17: '.0778391' χ2 p-value for Mo17 x B73: '.2726813' Biased in favor of strain: ''
GRMZM2G135935	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	4.068 x 10^-4	91	78	85	93	53.85%	52.25%	169	178	RefGen V2	χ2 p-value for B73 x Mo17: '.0004068' χ2 p-value for Mo17 x B73: '.0000448' Biased in favor of strain: ''
GRMZM2G135909	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03694 x 10^-2	119	21	31	33	85.00%	51.56%	140	64	RefGen V2	χ2 p-value for B73 x Mo17: '4.19e-06' χ2 p-value for Mo17 x B73: '.0103694' Biased in favor of strain: ''
GRMZM2G135909	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.25828 x 10^-2	119	68	87	61	63.64%	41.22%	187	148	RefGen V2	χ2 p-value for B73 x Mo17: '.0001919' χ2 p-value for Mo17 x B73: '.0325828' Biased in favor of strain: 'B73'
GRMZM2G135904	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.763274 x 10^-1	226	220	172	152	50.67%	46.91%	446	324	RefGen V2	χ2 p-value for B73 x Mo17: '.7763274' χ2 p-value for Mo17 x B73: '.2665205' Biased in favor of strain: ''
GRMZM2G135904	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.042053 x 10^-1	148	153	151	334	49.17%	68.87%	301	485	RefGen V2	χ2 p-value for B73 x Mo17: '1.20e-10' χ2 p-value for Mo17 x B73: '.3042053' Biased in favor of strain: ''
GRMZM2G135893	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	5	3	83.33%	37.50%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: ''
GRMZM2G135893	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	6	5	3	64.71%	37.50%	17	8	RefGen V2	χ2 p-value for B73 x Mo17: '.2252529' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G135877	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	4	0	3	20.00%	100.00%	5	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G135877	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G135866	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0548 x 10^-3	19	0	11	2	100.00%	15.38%	19	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: 'B73'
GRMZM2G135866	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.857 x 10^-4	37	7	28	7	84.09%	20.00%	44	35	RefGen V2	χ2 p-value for B73 x Mo17: '6.11e-06' χ2 p-value for Mo17 x B73: '.0003857' Biased in favor of strain: 'B73'
GRMZM2G135839	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.274 x 10^-4	210	132	218	145	61.40%	39.94%	342	363	RefGen V2	χ2 p-value for B73 x Mo17: '.0000247' χ2 p-value for Mo17 x B73: '.0001274' Biased in favor of strain: 'B73'
GRMZM2G135839	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999995 x 10^-1	59	39	40	80	60.20%	66.67%	98	120	RefGen V2	χ2 p-value for B73 x Mo17: '.1747195' χ2 p-value for Mo17 x B73: '.9999995' Biased in favor of strain: ''
GRMZM2G135834	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.09 x 10^-5	75	9	42	22	89.29%	34.38%	84	64	RefGen V2	χ2 p-value for B73 x Mo17: '.0000109' χ2 p-value for Mo17 x B73: '4.25e-08' Biased in favor of strain: 'B73'
GRMZM2G135834	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.7763 x 10^-3	158	114	152	109	58.09%	41.76%	272	261	RefGen V2	χ2 p-value for B73 x Mo17: '.0076329' χ2 p-value for Mo17 x B73: '.0077763' Biased in favor of strain: 'B73'
GRMZM2G135817	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.264211 x 10^-1	244	218	224	272	52.81%	54.84%	462	496	RefGen V2	χ2 p-value for B73 x Mo17: '.2264211' χ2 p-value for Mo17 x B73: '.0311412' Biased in favor of strain: ''
GRMZM2G135817	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.75 x 10^-5	267	194	124	404	57.92%	76.52%	461	528	RefGen V2	χ2 p-value for B73 x Mo17: '.0000675' χ2 p-value for Mo17 x B73: '1.58e-06' Biased in favor of strain: 'Mo17'
GRMZM2G135816	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.219956 x 10^-1	380	137	119	199	73.50%	62.58%	517	318	RefGen V2	χ2 p-value for B73 x Mo17: '.0009795' χ2 p-value for Mo17 x B73: '.1219956' Biased in favor of strain: ''
GRMZM2G135816	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.10973 x 10^-2	134	44	90	59	75.28%	39.60%	178	149	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-11' χ2 p-value for Mo17 x B73: '.0110973' Biased in favor of strain: 'B73'
GRMZM2G135808	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.003912 x 10^-1	460	374	436	399	55.16%	47.78%	834	835	RefGen V2	χ2 p-value for B73 x Mo17: '.002902' χ2 p-value for Mo17 x B73: '.2003912' Biased in favor of strain: ''
GRMZM2G135808	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.67886 x 10^-2	524	216	351	552	70.81%	61.13%	740	903	RefGen V2	χ2 p-value for B73 x Mo17: '.0167886' χ2 p-value for Mo17 x B73: '.0004161' Biased in favor of strain: ''
GRMZM2G135795	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7549 x 10^-2	44	43	30	98	50.57%	76.56%	87	128	RefGen V2	χ2 p-value for B73 x Mo17: '.0014522' χ2 p-value for Mo17 x B73: '.017549' Biased in favor of strain: ''
GRMZM2G135795	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.096289 x 10^-1	132	116	132	172	53.23%	56.58%	248	304	RefGen V2	χ2 p-value for B73 x Mo17: '.3096289' χ2 p-value for Mo17 x B73: '.0217815' Biased in favor of strain: ''
GRMZM2G135790	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.49958 x 10^-2	79	37	71	48	68.10%	40.34%	116	119	RefGen V2	χ2 p-value for B73 x Mo17: '.0000964' χ2 p-value for Mo17 x B73: '.0349958' Biased in favor of strain: 'B73'
GRMZM2G135790	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.26053 x 10^-1	39	19	26	45	67.24%	63.38%	58	71	RefGen V2	χ2 p-value for B73 x Mo17: '.926053' χ2 p-value for Mo17 x B73: '.5569167' Biased in favor of strain: ''
GRMZM2G135783	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	1	100.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G135783	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.84 x 10^-5	385	255	317	220	60.16%	40.97%	640	537	RefGen V2	χ2 p-value for B73 x Mo17: '2.77e-07' χ2 p-value for Mo17 x B73: '.0000284' Biased in favor of strain: 'B73'
GRMZM2G135782	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.076889 x 10^-1	526	318	298	260	62.32%	46.59%	844	558	RefGen V2	χ2 p-value for B73 x Mo17: '8.09e-13' χ2 p-value for Mo17 x B73: '.1076889' Biased in favor of strain: ''
GRMZM2G135782	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1945	459	1040	829	80.91%	44.36%	2404	1869	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G135763	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.14 x 10^-10	250	50	193	153	83.33%	44.22%	300	346	RefGen V2	χ2 p-value for B73 x Mo17: '9.14e-10' χ2 p-value for Mo17 x B73: '8.20e-19' Biased in favor of strain: 'B73'
GRMZM2G135763	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.35061 x 10^-2	410	328	346	284	55.56%	45.08%	738	630	RefGen V2	χ2 p-value for B73 x Mo17: '.0025406' χ2 p-value for Mo17 x B73: '.0135061' Biased in favor of strain: 'B73'
GRMZM2G135756	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173105 x 10^-1	10	33	6	10	23.26%	62.50%	43	16	RefGen V2	χ2 p-value for B73 x Mo17: '.0004524' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G135756	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.452871 x 10^-1	23	7	0	13	76.67%	100.00%	30	13	RefGen V2	χ2 p-value for B73 x Mo17: '.2452871' χ2 p-value for Mo17 x B73: '.0107875' Biased in favor of strain: ''
GRMZM2G135743	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.875367 x 10^-1	139	54	34	66	72.02%	66.00%	193	100	RefGen V2	χ2 p-value for B73 x Mo17: '.1146121' χ2 p-value for Mo17 x B73: '.8875367' Biased in favor of strain: ''
GRMZM2G135743	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.19 x 10^-20	379	153	322	125	71.24%	27.96%	532	447	RefGen V2	χ2 p-value for B73 x Mo17: '1.14e-22' χ2 p-value for Mo17 x B73: '1.19e-20' Biased in favor of strain: 'B73'
GRMZM2G135739	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	6	4	100.00%	40.00%	3	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.5270892' Biased in favor of strain: ''
GRMZM2G135739	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	2	5	66.67%	71.43%	3	7	RefGen V2	χ2 p-value for B73 x Mo17: '.999992' χ2 p-value for Mo17 x B73: '.7892681' Biased in favor of strain: ''
GRMZM2G135727	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.03828 x 10^-2	46	1	13	11	97.87%	45.83%	47	24	RefGen V2	χ2 p-value for B73 x Mo17: '5.67e-06' χ2 p-value for Mo17 x B73: '.0303828' Biased in favor of strain: ''
GRMZM2G135727	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.376 x 10^-4	60	17	34	9	77.92%	20.93%	77	43	RefGen V2	χ2 p-value for B73 x Mo17: '9.57e-07' χ2 p-value for Mo17 x B73: '.0001376' Biased in favor of strain: 'B73'
GRMZM2G135713	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	4	1	50.00%	20.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G135713	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G135703	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G135703	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G135691	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.680826 x 10^-1	210	204	226	250	50.72%	52.52%	414	476	RefGen V2	χ2 p-value for B73 x Mo17: '.7680826' χ2 p-value for Mo17 x B73: '.2713155' Biased in favor of strain: ''
GRMZM2G135691	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.529526 x 10^-1	104	27	55	86	79.39%	60.99%	131	141	RefGen V2	χ2 p-value for B73 x Mo17: '.0020085' χ2 p-value for Mo17 x B73: '.1529526' Biased in favor of strain: ''
GRMZM2G135688	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.29 x 10^-8	344	64	108	100	84.31%	48.08%	408	208	RefGen V2	χ2 p-value for B73 x Mo17: '3.99e-14' χ2 p-value for Mo17 x B73: '1.29e-08' Biased in favor of strain: 'B73'
GRMZM2G135688	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	534	168	511	176	76.07%	25.62%	702	687	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.09e-37' Biased in favor of strain: 'B73'
GRMZM2G135655	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.785147 x 10^-1	43	38	62	38	53.09%	38.00%	81	100	RefGen V2	χ2 p-value for B73 x Mo17: '.5785147' χ2 p-value for Mo17 x B73: '.0163951' Biased in favor of strain: ''
GRMZM2G135655	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	3.35 x 10^-12	0	31	41	11	0.00%	21.15%	31	52	RefGen V2	χ2 p-value for B73 x Mo17: '3.43e-15' χ2 p-value for Mo17 x B73: '3.35e-12' Biased in favor of strain: ''
GRMZM2G135654	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2323	472	1448	1361	83.11%	48.45%	2795	2809	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G135654	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.25 x 10^-9	2316	1728	1605	1289	57.27%	44.54%	4044	2894	RefGen V2	χ2 p-value for B73 x Mo17: '2.32e-20' χ2 p-value for Mo17 x B73: '4.25e-09' Biased in favor of strain: 'B73'
GRMZM2G135651	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.094537 x 10^-1	262	160	167	139	62.09%	45.42%	422	306	RefGen V2	χ2 p-value for B73 x Mo17: '6.86e-07' χ2 p-value for Mo17 x B73: '.1094537' Biased in favor of strain: ''
GRMZM2G135651	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.58 x 10^-20	508	93	251	145	84.53%	36.62%	601	396	RefGen V2	χ2 p-value for B73 x Mo17: '1.58e-20' χ2 p-value for Mo17 x B73: '7.12e-37' Biased in favor of strain: 'B73'

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