Displaying data sets 159901 - 160000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G15350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.6245'
Avg. expression score in LCM sample: '19.6364'
Tissue used: 'pure endosperm, no chalazal'
AT1G15350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.74578'
Avg. embryo expression (LCM): '5.16158'
AT1G15350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.2009'
Avg. expression score in LCM sample: '19.6364'
Tissue used: 'full endosperm'
AT1G15340 MBD10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.56215 x 10-1 4271 2095 1693 3435 67.09% 66.99% 6366 5128 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.113981'
Avg. expression score for this sample: '7529.1'
Avg. expression score in LCM sample: '674.664'
Tissue used: 'full endosperm'
AT1G15340 MBD10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.4 x 10-15 1471 505 74.44% 1976 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15340 MBD10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4224 x 10-2 7115 6331 2857 2550 52.92% 47.16% 13446 5407 TAIR8 Avg. embryo expression (dissected): '20709.5'
Avg. embryo expression (LCM): '6615.03'
AT1G15340 MBD10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-14 760 222 77.39% 982 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15340 MBD10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.113 x 10-3 774 320 70.75% 1094 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15340 MBD10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.669 x 10-3 4836 2606 2933 5583 64.98% 65.56% 7442 8516 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.113981'
Avg. expression score for this sample: '9973.17'
Avg. expression score in LCM sample: '674.664'
Tissue used: 'pure endosperm, no chalazal'
AT1G15330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.19339'
Avg. expression score in LCM sample: '1.24932'
Tissue used: 'pure endosperm, no chalazal'
AT1G15330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 17 16 2 3 51.52% 60.00% 33 5 TAIR8 Avg. embryo expression (dissected): '80.7147'
Avg. embryo expression (LCM): '3.18988'
AT1G15330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 3 3 100.00% 50.00% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.1983'
Avg. expression score in LCM sample: '1.24932'
Tissue used: 'full endosperm'
AT1G15330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 33 27 55.00% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.891675'
Avg. expression score in LCM sample: '1.01416'
Tissue used: 'pure endosperm, no chalazal'
AT1G15320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 6 45.45% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.200637'
Avg. embryo expression (LCM): '.866542'
AT1G15320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.86601'
Avg. expression score in LCM sample: '1.01416'
Tissue used: 'full endosperm'
AT1G15310 ATHSRP54A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.838 x 10-3 112 27 46 138 80.58% 75.00% 139 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00326'
Avg. expression score for this sample: '1010.11'
Avg. expression score in LCM sample: '229.655'
Tissue used: 'full endosperm'
AT1G15310 ATHSRP54A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.29637 x 10-1 244 77 76.01% 321 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15310 ATHSRP54A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 0 3 42.86% 100.00% 7 3 TAIR8 Avg. embryo expression (dissected): '273.788'
Avg. embryo expression (LCM): '48.878'
AT1G15310 ATHSRP54A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.05759 x 10-1 26 5 83.87% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15310 ATHSRP54A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.3655 x 10-2 326 134 70.87% 460 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15310 ATHSRP54A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.07048 x 10-1 26 6 13 21 81.25% 61.76% 32 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00326'
Avg. expression score for this sample: '996.516'
Avg. expression score in LCM sample: '229.655'
Tissue used: 'pure endosperm, no chalazal'
AT1G15290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.04946 x 10-1 426 226 169 293 65.34% 63.42% 652 462 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015214'
Avg. expression score for this sample: '747.343'
Avg. expression score in LCM sample: '252.143'
Tissue used: 'pure endosperm, no chalazal'
AT1G15290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.50311 x 10-1 647 613 139 149 51.35% 51.74% 1260 288 TAIR8 Avg. embryo expression (dissected): '1322.42'
Avg. embryo expression (LCM): '1104.88'
AT1G15290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6981 x 10-2 828 484 689 1261 63.11% 64.67% 1312 1950 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.015214'
Avg. expression score for this sample: '629.277'
Avg. expression score in LCM sample: '252.143'
Tissue used: 'full endosperm'
AT1G15290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.179 x 10-3 200 76 72.46% 276 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.97425 x 10-1 139 66 67.80% 205 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.45043 x 10-1 55 24 69.62% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8903 x 10-1 436 166 72.43% 602 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-24 1513 359 80.82% 1872 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.29232 x 10-1 2607 930 1664 2372 73.71% 58.77% 3537 4036 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.1e-10'
Avg. expression score for this sample: '1745.74'
Avg. expression score in LCM sample: '501.89'
Tissue used: 'pure endosperm, no chalazal'
AT1G15280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2522 282 89.94% 2804 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.94679 x 10-1 1540 1232 852 582 55.56% 40.59% 2772 1434 TAIR8 Avg. embryo expression (dissected): '1817.3'
Avg. embryo expression (LCM): '879.05'
AT1G15280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.6 x 10-23 3477 891 1224 2476 79.60% 66.92% 4368 3700 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.1e-10'
Avg. expression score for this sample: '1635.53'
Avg. expression score in LCM sample: '501.89'
Tissue used: 'full endosperm'
AT1G15270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5 x 10-5 59 18 19 135 76.62% 87.66% 77 154 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000043'
Avg. expression score for this sample: '281.66'
Avg. expression score in LCM sample: '102.106'
Tissue used: 'full endosperm'
AT1G15270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.33985 x 10-1 93 30 75.61% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.10898 x 10-1 4 13 3 1 23.53% 25.00% 17 4 TAIR8 Avg. embryo expression (dissected): '119.013'
Avg. embryo expression (LCM): '333.129'
AT1G15270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.27468 x 10-1 188 49 79.32% 237 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.72289 x 10-1 62 9 87.32% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 8 2 18 42.86% 90.00% 14 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000043'
Avg. expression score for this sample: '140.941'
Avg. expression score in LCM sample: '102.106'
Tissue used: 'pure endosperm, no chalazal'
AT1G15260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.87607 x 10-1 15 3 1 3 83.33% 75.00% 18 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.455041'
Avg. expression score for this sample: '14.2229'
Avg. expression score in LCM sample: '9.03922'
Tissue used: 'pure endosperm, no chalazal'
AT1G15260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.23544 x 10-1 23 28 6 6 45.10% 50.00% 51 12 TAIR8 Avg. embryo expression (dissected): '59.2059'
Avg. embryo expression (LCM): '29.3494'
AT1G15260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 29 4 10 3 87.88% 23.08% 33 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.455041'
Avg. expression score for this sample: '21.1624'
Avg. expression score in LCM sample: '9.03922'
Tissue used: 'full endosperm'
AT1G15260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-4 63 2 96.92% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.0508 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.69008 x 10-1 24 3 88.89% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.67199 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.60773 x 10-1 15 10 60.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.51642 x 10-1 12 4 2 6 75.00% 75.00% 16 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.729541'
Avg. expression score for this sample: '45.0519'
Avg. expression score in LCM sample: '21.8558'
Tissue used: 'pure endosperm, no chalazal'
AT1G15250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.77086 x 10-1 16 9 1 0 64.00% 0.00% 25 1 TAIR8 Avg. embryo expression (dissected): '69.4883'
Avg. embryo expression (LCM): '182.074'
AT1G15250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 19 9 8 17 67.86% 68.00% 28 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.729541'
Avg. expression score for this sample: '48.957'
Avg. expression score in LCM sample: '21.8558'
Tissue used: 'full endosperm'
AT1G15240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.831 x 10-3 167 45 84 216 78.77% 72.00% 212 300 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0074'
Avg. expression score for this sample: '283.692'
Avg. expression score in LCM sample: '151.491'
Tissue used: 'full endosperm'
AT1G15240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-20 556 42 92.98% 598 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.54887 x 10-1 33 29 12 18 53.23% 60.00% 62 30 TAIR8 Avg. embryo expression (dissected): '282.174'
Avg. embryo expression (LCM): '115.162'
AT1G15240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.16087 x 10-1 38 11 77.55% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0 x 10-5 270 48 84.91% 318 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.94771 x 10-1 50 21 20 43 70.42% 68.25% 71 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0074'
Avg. expression score for this sample: '349.035'
Avg. expression score in LCM sample: '151.491'
Tissue used: 'pure endosperm, no chalazal'
AT1G15230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '496.132'
Avg. expression score in LCM sample: '134.265'
Tissue used: 'pure endosperm, no chalazal'
AT1G15230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '295.895'
Avg. embryo expression (LCM): '185.515'
AT1G15230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.86131 x 10-1 2 3 2 0 40.00% 0.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '434.945'
Avg. expression score in LCM sample: '134.265'
Tissue used: 'full endosperm'
AT1G15230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4565 x 10-2 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15220 CCMH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15220 CCMH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15220 CCMH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.0006'
Avg. expression score in LCM sample: '6.27601'
Tissue used: 'pure endosperm, no chalazal'
AT1G15220 CCMH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15220 CCMH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '17.6052'
Avg. embryo expression (LCM): '21.4626'
AT1G15220 CCMH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.2966'
Avg. expression score in LCM sample: '6.27601'
Tissue used: 'full endosperm'
AT1G15215 SHH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.84773 x 10-1 14 4 3 15 77.78% 83.33% 18 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.179044'
Avg. expression score for this sample: '39.5094'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G15215 SHH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4473 x 10-2 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15215 SHH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77087 x 10-1 11 17 5 3 39.29% 37.50% 28 8 TAIR8 Avg. embryo expression (dissected): '26.0511'
Avg. embryo expression (LCM): '31.7355'
AT1G15215 SHH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.91189 x 10-1 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15215 SHH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15215 SHH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.85082 x 10-1 7 1 2 6 87.50% 75.00% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.179044'
Avg. expression score for this sample: '16.3284'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G15210 ABCG35 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.96086'
Avg. expression score in LCM sample: '3.24824'
Tissue used: 'pure endosperm, no chalazal'
AT1G15210 ABCG35 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 1 4 1 0 20.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '27.037'
Avg. embryo expression (LCM): '21.651'
AT1G15210 ABCG35 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.2896'
Avg. expression score in LCM sample: '3.24824'
Tissue used: 'full endosperm'
AT1G15210 ABCG35 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15210 ABCG35 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15210 ABCG35 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 5705 1733 76.70% 7438 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.5 x 10-12 984 288 77.36% 1272 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.90216 x 10-1 6439 3744 3561 8009 63.23% 69.22% 10183 11570 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.5e-09'
Avg. expression score for this sample: '8838.24'
Avg. expression score in LCM sample: '598.279'
Tissue used: 'pure endosperm, no chalazal'
AT1G15200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 5980 1377 81.28% 7357 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.6784 x 10-2 5119 5551 2480 2606 47.98% 51.24% 10670 5086 TAIR8 Avg. embryo expression (dissected): '11648'
Avg. embryo expression (LCM): '4838.57'
AT1G15200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-19 7192 3460 2421 7080 67.52% 74.52% 10652 9501 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.5e-09'
Avg. expression score for this sample: '6214.75'
Avg. expression score in LCM sample: '598.279'
Tissue used: 'full endosperm'
AT1G15190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.818 x 10-3 76 15 13 44 83.52% 77.19% 91 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05756'
Avg. expression score for this sample: '90.1451'
Avg. expression score in LCM sample: '14.0659'
Tissue used: 'full endosperm'
AT1G15190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.59 x 10-4 86 62 58.11% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.38262 x 10-1 14 24 2 8 36.84% 80.00% 38 10 TAIR8 Avg. embryo expression (dissected): '74.2935'
Avg. embryo expression (LCM): '3.27779'
AT1G15190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.6 x 10-5 3 12 20.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'