Displaying data sets 15901 - 16000 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G44030 CESA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.70355 x 10-1 34 11 8 29 75.56% 78.38% 45 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034436'
Avg. expression score for this sample: '7.44128'
Avg. expression score in LCM sample: '4.80622'
Tissue used: 'pure endosperm, no chalazal'
AT5G44030 CESA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.3661 x 10-2 58 11 11 18 84.06% 62.07% 69 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034436'
Avg. expression score for this sample: '6.35825'
Avg. expression score in LCM sample: '4.80622'
Tissue used: 'full endosperm'
AT5G44030 CESA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.88824 x 10-1 13 20 8 4 39.39% 33.33% 33 12 TAIR8 Avg. embryo expression (dissected): '6.0793'
Avg. embryo expression (LCM): '4.48341'
AT5G44030 CESA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.92796 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44030 CESA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.84 x 10-4 69 4 94.52% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44030 CESA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-5 149 10 93.71% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.628242'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.65958'
Avg. expression score in LCM sample: '4.43877'
Tissue used: 'pure endosperm, no chalazal'
AT5G44010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.41283'
Avg. expression score in LCM sample: '4.43877'
Tissue used: 'full endosperm'
AT5G44010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.60561'
Avg. embryo expression (LCM): '9.48173'
AT5G44010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '3.14427'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1 8 0 0 0 100.00% 8 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '12.3904'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44005 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44005 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.14286 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44005 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44005 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 11 4 20 54.17% 83.33% 24 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.339056'
Avg. expression score for this sample: '153.889'
Avg. expression score in LCM sample: '91.3916'
Tissue used: 'pure endosperm, no chalazal'
AT5G44000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.30555 x 10-1 49 17 27 67 74.24% 71.28% 66 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.339056'
Avg. expression score for this sample: '211.809'
Avg. expression score in LCM sample: '91.3916'
Tissue used: 'full endosperm'
AT5G44000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.22208 x 10-1 7 15 4 7 31.82% 63.64% 22 11 TAIR8 Avg. embryo expression (dissected): '177.829'
Avg. embryo expression (LCM): '91.866'
AT5G44000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.66824 x 10-1 13 2 86.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3756 x 10-2 117 27 81.25% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5563 x 10-2 104 22 82.54% 126 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43990 SUVR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.40963 x 10-1 8 10 7 12 44.44% 63.16% 18 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.519921'
Avg. expression score for this sample: '28.2789'
Avg. expression score in LCM sample: '23.5167'
Tissue used: 'pure endosperm, no chalazal'
AT5G43990 SUVR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.62949 x 10-1 33 13 11 46 71.74% 80.70% 46 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.519921'
Avg. expression score for this sample: '39.2084'
Avg. expression score in LCM sample: '23.5167'
Tissue used: 'full endosperm'
AT5G43990 SUVR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.45653 x 10-1 15 20 2 1 42.86% 33.33% 35 3 TAIR8 Avg. embryo expression (dissected): '43.4479'
Avg. embryo expression (LCM): '55.3959'
AT5G43990 SUVR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.5813 x 10-2 19 2 90.48% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43990 SUVR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.57488 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43990 SUVR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.1016 x 10-2 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43980 PDLP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.23558 x 10-1 182 41 110 83 81.61% 43.01% 223 193 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560725'
Avg. expression score for this sample: '302.102'
Avg. expression score in LCM sample: '586.212'
Tissue used: 'pure endosperm, no chalazal'
AT5G43980 PDLP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 140 28 98 114 83.33% 53.77% 168 212 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560725'
Avg. expression score for this sample: '210.482'
Avg. expression score in LCM sample: '586.212'
Tissue used: 'full endosperm'
AT5G43980 PDLP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00323 x 10-1 6 1 2 2 85.71% 50.00% 7 4 TAIR8 Avg. embryo expression (dissected): '19.4559'
Avg. embryo expression (LCM): '2.07217'
AT5G43980 PDLP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.279 x 10-3 12 21 36.36% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43980 PDLP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2 x 10-28 370 581 38.91% 951 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43980 PDLP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 700 60 92.11% 760 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43970 TOM22-V endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.2966'
Avg. expression score in LCM sample: '17.2554'
Tissue used: 'pure endosperm, no chalazal'
AT5G43970 TOM22-V endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '55.3168'
Avg. expression score in LCM sample: '17.2554'
Tissue used: 'full endosperm'
AT5G43970 TOM22-V embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '67.7223'
Avg. embryo expression (LCM): '147.5'
AT5G43970 TOM22-V endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43970 TOM22-V endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43970 TOM22-V endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.66634 x 10-1 27 7 12 26 79.41% 68.42% 34 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '288.414'
Avg. expression score in LCM sample: '243.001'
Tissue used: 'pure endosperm, no chalazal'
AT5G43960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.89651 x 10-1 50 14 55 70 78.12% 56.00% 64 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '193.663'
Avg. expression score in LCM sample: '243.001'
Tissue used: 'full endosperm'
AT5G43960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.34208 x 10-1 52 45 7 12 53.61% 63.16% 97 19 TAIR8 Avg. embryo expression (dissected): '553.622'
Avg. embryo expression (LCM): '684.555'
AT5G43960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.40429 x 10-1 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.39444 x 10-1 484 252 65.76% 736 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4 x 10-8 355 65 84.52% 420 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.68306 x 10-1 58 83 31 129 41.13% 80.62% 141 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.81378'
Avg. expression score for this sample: '81.6531'
Avg. expression score in LCM sample: '20.3419'
Tissue used: 'pure endosperm, no chalazal'
AT5G43950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.13691 x 10-1 106 77 29 132 57.92% 81.99% 183 161 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.81378'
Avg. expression score for this sample: '79.3318'
Avg. expression score in LCM sample: '20.3419'
Tissue used: 'full endosperm'
AT5G43950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.37021 x 10-1 63 79 18 29 44.37% 61.70% 142 47 TAIR8 Avg. embryo expression (dissected): '93.9591'
Avg. embryo expression (LCM): '48.2752'
AT5G43950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.13 x 10-4 67 13 83.75% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2 x 10-7 59 4 93.65% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-6 97 15 86.61% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43940 HOT5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '775.603'
Avg. expression score in LCM sample: '394.036'
Tissue used: 'pure endosperm, no chalazal'
AT5G43940 HOT5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '744.036'
Avg. expression score in LCM sample: '394.036'
Tissue used: 'full endosperm'
AT5G43940 HOT5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1075.58'
Avg. embryo expression (LCM): '818.066'
AT5G43940 HOT5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43940 HOT5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43940 HOT5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43935 FLS6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43935 FLS6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.412136'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43935 FLS6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.847876'
Avg. embryo expression (LCM): '0'
AT5G43935 FLS6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43935 FLS6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43935 FLS6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '38.1776'
Avg. expression score in LCM sample: '28.4552'
Tissue used: 'pure endosperm, no chalazal'
AT5G43930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.4334'
Avg. expression score in LCM sample: '28.4552'
Tissue used: 'full endosperm'
AT5G43930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '35.1767'
Avg. embryo expression (LCM): '33.3179'
AT5G43930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 5 12 24 66.67% 66.67% 15 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.0539'
Avg. expression score in LCM sample: '6.43769'
Tissue used: 'pure endosperm, no chalazal'
AT5G43920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 27 9 12 15 75.00% 55.56% 36 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '31.5558'
Avg. expression score in LCM sample: '6.43769'
Tissue used: 'full endosperm'
AT5G43920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.54732 x 10-1 36 24 14 8 60.00% 36.36% 60 22 TAIR8 Avg. embryo expression (dissected): '59.3611'
Avg. embryo expression (LCM): '57.5434'
AT5G43920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.22907 x 10-1 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3 x 10-5 56 4 93.33% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.39256'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'pure endosperm, no chalazal'
AT5G43910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.08133'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'full endosperm'
AT5G43910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.70836'
Avg. embryo expression (LCM): '0'
AT5G43910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43900 MYA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '52.5209'
Avg. expression score in LCM sample: '33.0409'
Tissue used: 'pure endosperm, no chalazal'
AT5G43900 MYA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '80.3078'
Avg. expression score in LCM sample: '33.0409'
Tissue used: 'full endosperm'
AT5G43900 MYA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '28.2125'
Avg. embryo expression (LCM): '17.3936'
AT5G43900 MYA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43900 MYA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43900 MYA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43890 YUC5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G43890 YUC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.402535'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G43890 YUC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.852094'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G43890 YUC5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '4.06106'
Avg. embryo expression (LCM): '0'