| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G836886 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.32 x 10-11 | 303 | 152 | 304 | 161 | 66.59% | 34.62% | 455 | 465 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.45e-12' χ2 p-value for Mo17 x B73: '3.32e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G836886 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5465 x 10-3 | 153 | 45 | 152 | 147 | 77.27% | 49.16% | 198 | 299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015465' χ2 p-value for Mo17 x B73: '1.36e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G836767 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G836767 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 0 | 0 | 50.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G836683 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.6556 x 10-3 | 63 | 36 | 72 | 37 | 63.64% | 33.94% | 99 | 109 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0066556' χ2 p-value for Mo17 x B73: '.0008012' Biased in favor of strain: 'B73' |
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| GRMZM5G836683 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.767473 x 10-1 | 9 | 7 | 6 | 32 | 56.25% | 84.21% | 16 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3767473' χ2 p-value for Mo17 x B73: '.0217815' Biased in favor of strain: '' |
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| GRMZM5G836674 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.51 x 10-10 | 671 | 205 | 357 | 382 | 76.60% | 51.69% | 876 | 739 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.51e-10' χ2 p-value for Mo17 x B73: '5.83e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G836674 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.88 x 10-14 | 616 | 381 | 696 | 365 | 61.79% | 34.40% | 997 | 1061 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.88e-14' χ2 p-value for Mo17 x B73: '2.94e-24' Biased in favor of strain: 'B73' |
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| GRMZM5G836588 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.948866 x 10-1 | 9 | 4 | 12 | 14 | 69.23% | 53.85% | 13 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.6948866' Biased in favor of strain: '' |
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| GRMZM5G836588 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 2 | 2 | 0.00% | 50.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G836567 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.73416 x 10-1 | 83 | 57 | 79 | 149 | 59.29% | 65.35% | 140 | 228 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0639302' χ2 p-value for Mo17 x B73: '.673416' Biased in favor of strain: '' |
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| GRMZM5G836567 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.967175 x 10-1 | 87 | 151 | 83 | 97 | 36.55% | 53.89% | 238 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000335' χ2 p-value for Mo17 x B73: '.2967175' Biased in favor of strain: '' |
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| GRMZM5G836406 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.815113 x 10-1 | 7 | 6 | 4 | 10 | 53.85% | 71.43% | 13 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7815113' χ2 p-value for Mo17 x B73: '.1088094' Biased in favor of strain: '' |
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| GRMZM5G836406 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.22 x 10-9 | 88 | 3 | 26 | 0 | 96.70% | 0.00% | 91 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.22e-09' χ2 p-value for Mo17 x B73: '5.55e-13' Biased in favor of strain: 'B73' |
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| GRMZM5G836389 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.175272 x 10-1 | 9 | 1 | 12 | 10 | 90.00% | 45.45% | 10 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1175272' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM5G836389 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 28 | 2 | 12 | 12 | 93.33% | 50.00% | 30 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.07e-06' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G836353 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 19 | 4 | 2 | 4 | 82.61% | 66.67% | 23 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017617' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM5G836353 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.23 x 10-28 | 560 | 53 | 113 | 35 | 91.35% | 23.65% | 613 | 148 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.91e-38' χ2 p-value for Mo17 x B73: '1.23e-28' Biased in favor of strain: 'B73' |
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| GRMZM5G836341 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.98602 x 10-2 | 6 | 9 | 1 | 12 | 40.00% | 92.31% | 15 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0284579' χ2 p-value for Mo17 x B73: '.0498602' Biased in favor of strain: '' |
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| GRMZM5G836341 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 1 | 24 | 0 | 12 | 4.00% | 100.00% | 25 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.22e-06' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: 'Mo17' |
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| GRMZM5G836250 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G836250 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.87817 x 10-2 | 25 | 0 | 8 | 6 | 100.00% | 42.86% | 25 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000407' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM5G836190 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.553297 x 10-1 | 14 | 9 | 12 | 13 | 60.87% | 52.00% | 23 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5553297' χ2 p-value for Mo17 x B73: '.1197949' Biased in favor of strain: '' |
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| GRMZM5G836190 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.08 x 10-25 | 1892 | 1288 | 2073 | 1459 | 59.50% | 41.31% | 3180 | 3532 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.05e-27' χ2 p-value for Mo17 x B73: '5.08e-25' Biased in favor of strain: 'B73' |
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| GRMZM5G835810 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 0 | 0 | 75.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G835810 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 0 | 0 | 2 | 100.00% | 100.00% | 15 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0061701' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G835772 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.074339 x 10-1 | 64 | 23 | 41 | 67 | 73.56% | 62.04% | 87 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1723987' χ2 p-value for Mo17 x B73: '.3074339' Biased in favor of strain: '' |
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| GRMZM5G835772 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.443186 x 10-1 | 103 | 102 | 78 | 75 | 50.24% | 49.02% | 205 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9443186' χ2 p-value for Mo17 x B73: '.8083652' Biased in favor of strain: '' |
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| GRMZM5G835542 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.18181 x 10-2 | 226 | 188 | 231 | 138 | 54.59% | 37.40% | 414 | 369 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0618181' χ2 p-value for Mo17 x B73: '1.29e-06' Biased in favor of strain: '' |
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| GRMZM5G835542 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.94 x 10-7 | 307 | 85 | 153 | 149 | 78.32% | 49.34% | 392 | 302 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.94e-07' χ2 p-value for Mo17 x B73: '1.68e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G835530 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.85979 x 10-2 | 170 | 119 | 88 | 228 | 58.82% | 72.15% | 289 | 316 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046764' χ2 p-value for Mo17 x B73: '.0385979' Biased in favor of strain: '' |
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| GRMZM5G835530 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.543382 x 10-1 | 152 | 153 | 116 | 95 | 49.84% | 45.02% | 305 | 211 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9543382' χ2 p-value for Mo17 x B73: '.1482615' Biased in favor of strain: '' |
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| GRMZM5G835323 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3713 | 1490 | 2764 | 1380 | 71.36% | 33.30% | 5203 | 4144 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G835323 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5512 | 984 | 2290 | 1990 | 84.85% | 46.50% | 6496 | 4280 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G835235 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G835235 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 0 | 75.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G835213 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.92 x 10-16 | 321 | 114 | 260 | 104 | 73.79% | 28.57% | 435 | 364 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.24e-23' χ2 p-value for Mo17 x B73: '2.92e-16' Biased in favor of strain: 'B73' |
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| GRMZM5G835213 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3 x 10-29 | 753 | 138 | 411 | 328 | 84.51% | 44.38% | 891 | 739 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.32e-29' χ2 p-value for Mo17 x B73: '8.65e-38' Biased in favor of strain: 'B73' |
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| GRMZM5G835039 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.90169 x 10-2 | 11 | 0 | 12 | 5 | 100.00% | 29.41% | 11 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.0011201' Biased in favor of strain: '' |
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| GRMZM5G835039 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.495413 x 10-1 | 15 | 24 | 14 | 25 | 38.46% | 64.10% | 39 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1495413' χ2 p-value for Mo17 x B73: '.0781691' Biased in favor of strain: '' |
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| GRMZM5G834894 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.086678 x 10-1 | 23 | 9 | 19 | 12 | 71.88% | 38.71% | 32 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0133283' χ2 p-value for Mo17 x B73: '.2086678' Biased in favor of strain: '' |
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| GRMZM5G834894 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.959648 x 10-1 | 25 | 9 | 20 | 13 | 73.53% | 39.39% | 34 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3959648' χ2 p-value for Mo17 x B73: '.000889' Biased in favor of strain: '' |
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| GRMZM5G834837 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.213352 x 10-1 | 59 | 9 | 14 | 16 | 86.76% | 53.33% | 68 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004386' χ2 p-value for Mo17 x B73: '.1213352' Biased in favor of strain: '' |
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| GRMZM5G834837 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 82 | 26 | 52 | 52 | 75.93% | 50.00% | 108 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.10e-08' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM5G834833 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.28 x 10-11 | 73 | 0 | 44 | 0 | 100.00% | 0.00% | 73 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.30e-17' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G834833 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 1 | 0 | 100.00% | 0.00% | 8 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G834758 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.580196 x 10-1 | 16 | 2 | 12 | 17 | 88.89% | 58.62% | 18 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455017' χ2 p-value for Mo17 x B73: '.3580196' Biased in favor of strain: '' |
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| GRMZM5G834758 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 23 | 23 | 21 | 19 | 50.00% | 47.50% | 46 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: '' |
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| GRMZM5G834734 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.389798 x 10-1 | 58 | 44 | 39 | 31 | 56.86% | 44.29% | 102 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1656838' χ2 p-value for Mo17 x B73: '.3389798' Biased in favor of strain: '' |
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| GRMZM5G834734 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.45461 x 10-1 | 71 | 36 | 37 | 49 | 66.36% | 56.98% | 107 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.945461' χ2 p-value for Mo17 x B73: '.05662' Biased in favor of strain: '' |
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| GRMZM5G834596 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 3 | 0.00% | 100.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM5G834596 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 10 | 0 | 1 | 0.00% | 100.00% | 10 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G834532 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.2992 x 10-3 | 111 | 75 | 118 | 74 | 59.68% | 38.54% | 186 | 192 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0082992' χ2 p-value for Mo17 x B73: '.0014962' Biased in favor of strain: 'B73' |
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| GRMZM5G834532 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.5075 x 10-3 | 78 | 16 | 21 | 16 | 82.98% | 43.24% | 94 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007941' χ2 p-value for Mo17 x B73: '.0025075' Biased in favor of strain: 'B73' |
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| GRMZM5G834354 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.403 x 10-4 | 198 | 61 | 115 | 132 | 76.45% | 53.44% | 259 | 247 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008403' χ2 p-value for Mo17 x B73: '.0000104' Biased in favor of strain: 'B73' |
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| GRMZM5G834354 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.04 x 10-8 | 299 | 155 | 232 | 124 | 65.86% | 34.83% | 454 | 356 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.40e-11' χ2 p-value for Mo17 x B73: '1.04e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G834335 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.40775 x 10-2 | 22 | 40 | 15 | 27 | 35.48% | 64.29% | 62 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0222541' χ2 p-value for Mo17 x B73: '.0640775' Biased in favor of strain: '' |
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| GRMZM5G834335 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.73662 x 10-2 | 24 | 22 | 15 | 52 | 52.17% | 77.61% | 46 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0370527' χ2 p-value for Mo17 x B73: '.0573662' Biased in favor of strain: '' |
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| GRMZM5G834286 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G834286 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 5 | 2 | 50.00% | 28.57% | 6 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| GRMZM5G834205 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2223 | 887 | 1884 | 948 | 71.48% | 33.47% | 3110 | 2832 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G834205 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.05 x 10-21 | 3339 | 1216 | 1475 | 2125 | 73.30% | 59.03% | 4555 | 3600 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.05e-21' χ2 p-value for Mo17 x B73: '2.41e-22' Biased in favor of strain: 'B73' |
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| GRMZM5G834040 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.111 x 10-4 | 0 | 15 | 0 | 22 | 0.00% | 100.00% | 15 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'Mo17' |
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| GRMZM5G834040 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.51 x 10-9 | 0 | 34 | 0 | 55 | 0.00% | 100.00% | 34 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.51e-09' χ2 p-value for Mo17 x B73: '1.21e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM5G834001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 0 | 1 | 0.00% | 100.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G834001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 10 | 0.00% | 100.00% | 1 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM5G833945 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G833945 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 6 | 0 | 18 | 14.29% | 100.00% | 7 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: '' |
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| GRMZM5G833774 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.016996 x 10-1 | 48 | 32 | 26 | 34 | 60.00% | 56.67% | 80 | 60 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0736383' χ2 p-value for Mo17 x B73: '.3016996' Biased in favor of strain: '' |
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| GRMZM5G833774 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.797123 x 10-1 | 75 | 14 | 36 | 54 | 84.27% | 60.00% | 89 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004271' χ2 p-value for Mo17 x B73: '.1797123' Biased in favor of strain: '' |
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| GRMZM5G833747 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.11 x 10-17 | 394 | 68 | 220 | 132 | 85.28% | 37.50% | 462 | 352 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.11e-17' χ2 p-value for Mo17 x B73: '3.74e-31' Biased in favor of strain: 'B73' |
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| GRMZM5G833747 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.87 x 10-16 | 272 | 104 | 190 | 61 | 72.34% | 24.30% | 376 | 251 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.56e-18' χ2 p-value for Mo17 x B73: '3.87e-16' Biased in favor of strain: 'B73' |
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| GRMZM5G833699 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.73972 x 10-1 | 95 | 99 | 19 | 98 | 48.97% | 83.76% | 194 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.773972' χ2 p-value for Mo17 x B73: '2.80e-13' Biased in favor of strain: '' |
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| GRMZM5G833699 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.1 x 10-29 | 311 | 385 | 136 | 740 | 44.68% | 84.47% | 696 | 876 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.76e-35' χ2 p-value for Mo17 x B73: '5.05e-29' Biased in favor of strain: 'Mo17' |
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| GRMZM5G833660 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 1 | 8 | 33.33% | 88.89% | 3 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G833660 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 2 | 1 | 50.00% | 33.33% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM5G833593 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.65 x 10-15 | 376 | 186 | 449 | 245 | 66.90% | 35.30% | 562 | 694 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.10e-15' χ2 p-value for Mo17 x B73: '9.65e-15' Biased in favor of strain: 'B73' |
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| GRMZM5G833593 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.79 x 10-5 | 359 | 115 | 244 | 270 | 75.74% | 52.53% | 474 | 514 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000279' χ2 p-value for Mo17 x B73: '1.05e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G833563 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 6 | 1 | 100.00% | 14.29% | 12 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: '' |
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| GRMZM5G833563 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1412 x 10-2 | 57 | 33 | 61 | 22 | 63.33% | 26.51% | 90 | 83 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.011412' χ2 p-value for Mo17 x B73: '.0000186' Biased in favor of strain: 'B73' |
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| GRMZM5G833477 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.43345 x 10-1 | 79 | 65 | 100 | 51 | 54.86% | 33.77% | 144 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.243345' χ2 p-value for Mo17 x B73: '.0000668' Biased in favor of strain: '' |
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| GRMZM5G833477 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 3.51 x 10-13 | 7 | 38 | 70 | 15 | 15.56% | 17.65% | 45 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.51e-13' χ2 p-value for Mo17 x B73: '9.06e-22' Biased in favor of strain: '' |
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| GRMZM5G833389 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999997 x 10-1 | 35 | 19 | 15 | 30 | 64.81% | 66.67% | 54 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7728026' χ2 p-value for Mo17 x B73: '.9999997' Biased in favor of strain: '' |
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| GRMZM5G833389 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 1 | 10 | 80.00% | 90.91% | 5 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.0066556' Biased in favor of strain: '' |
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| GRMZM5G833332 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.971465 x 10-1 | 20 | 11 | 9 | 14 | 64.52% | 60.87% | 31 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1059975' χ2 p-value for Mo17 x B73: '.2971465' Biased in favor of strain: '' |
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| GRMZM5G833332 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.838825 x 10-1 | 26 | 0 | 6 | 16 | 100.00% | 72.73% | 26 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003115' χ2 p-value for Mo17 x B73: '.5838825' Biased in favor of strain: '' |
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| GRMZM5G833253 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 1 | 25.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G833253 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G833124 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.631 x 10-3 | 393 | 300 | 329 | 253 | 56.71% | 43.47% | 693 | 582 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004112' χ2 p-value for Mo17 x B73: '.001631' Biased in favor of strain: 'B73' |
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| GRMZM5G833124 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.51 x 10-6 | 781 | 287 | 365 | 507 | 73.13% | 58.14% | 1068 | 872 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.51e-06' χ2 p-value for Mo17 x B73: '9.30e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G833054 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.285934 x 10-1 | 18 | 34 | 31 | 65 | 34.62% | 67.71% | 52 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.44e-07' χ2 p-value for Mo17 x B73: '.8285934' Biased in favor of strain: '' |
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| GRMZM5G833054 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.961175 x 10-1 | 34 | 28 | 28 | 31 | 54.84% | 52.54% | 62 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4460596' χ2 p-value for Mo17 x B73: '.6961175' Biased in favor of strain: '' |
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| GRMZM5G833032 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.64 x 10-5 | 37 | 5 | 25 | 4 | 88.10% | 13.79% | 42 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.90e-07' χ2 p-value for Mo17 x B73: '.0000964' Biased in favor of strain: 'B73' |
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| GRMZM5G833032 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 5 | 4 | 100.00% | 44.44% | 10 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: '' |
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| GRMZM5G832989 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.57 x 10-8 | 1229 | 404 | 615 | 931 | 75.26% | 60.22% | 1633 | 1546 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.75e-13' χ2 p-value for Mo17 x B73: '7.57e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G832989 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.012523 x 10-1 | 646 | 507 | 509 | 501 | 56.03% | 49.60% | 1153 | 1010 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000425' χ2 p-value for Mo17 x B73: '.8012523' Biased in favor of strain: '' |
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| GRMZM5G832939 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937686 x 10-1 | 9 | 13 | 8 | 26 | 40.91% | 76.47% | 22 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3937686' χ2 p-value for Mo17 x B73: '.002022' Biased in favor of strain: '' |
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| GRMZM5G832939 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.020284 x 10-1 | 21 | 34 | 26 | 66 | 38.18% | 71.74% | 55 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.42e-06' χ2 p-value for Mo17 x B73: '.3020284' Biased in favor of strain: '' |
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| GRMZM5G832908 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.029427 x 10-1 | 38 | 17 | 51 | 32 | 69.09% | 38.55% | 55 | 83 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7029427' χ2 p-value for Mo17 x B73: '5.54e-08' Biased in favor of strain: '' |
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| GRMZM5G832908 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.809 x 10-4 | 63 | 25 | 49 | 20 | 71.59% | 28.99% | 88 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000051' χ2 p-value for Mo17 x B73: '.0004809' Biased in favor of strain: 'B73' |