Displaying data sets 1501 - 1600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G65490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.61006 x 10-1 180 58 91 90 75.63% 49.72% 238 181 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.719712'
Avg. expression score for this sample: '178.416'
Avg. expression score in LCM sample: '70.1532'
Tissue used: 'pure endosperm, no chalazal'
AT5G65490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.32172 x 10-1 222 55 162 267 80.14% 62.24% 277 429 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.719712'
Avg. expression score for this sample: '258.436'
Avg. expression score in LCM sample: '70.1532'
Tissue used: 'full endosperm'
AT5G65490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.6435 x 10-2 150 79 53 39 65.50% 42.39% 229 92 TAIR8 Avg. embryo expression (dissected): '245.893'
Avg. embryo expression (LCM): '205.684'
AT5G65490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.53652 x 10-1 34 19 64.15% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.1 x 10-11 433 389 52.68% 822 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-13 613 131 82.39% 744 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.81425 x 10-1 135 64 74 97 67.84% 56.73% 199 171 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014893'
Avg. expression score for this sample: '268.902'
Avg. expression score in LCM sample: '172.054'
Tissue used: 'pure endosperm, no chalazal'
AT5G65480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.76 x 10-4 306 109 95 313 73.73% 76.72% 415 408 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014893'
Avg. expression score for this sample: '356.213'
Avg. expression score in LCM sample: '172.054'
Tissue used: 'full endosperm'
AT5G65480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.81526 x 10-1 94 73 23 21 56.29% 47.73% 167 44 TAIR8 Avg. embryo expression (dissected): '207.094'
Avg. embryo expression (LCM): '205.81'
AT5G65480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.16495 x 10-1 75 24 75.76% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.09032 x 10-1 96 34 73.85% 130 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3 x 10-15 176 9 95.14% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 12 6 16 63.64% 72.73% 33 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.124514'
Avg. expression score for this sample: '33.7385'
Avg. expression score in LCM sample: '18.2107'
Tissue used: 'pure endosperm, no chalazal'
AT5G65470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.9231 x 10-2 49 16 26 82 75.38% 75.93% 65 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.124514'
Avg. expression score for this sample: '63.1221'
Avg. expression score in LCM sample: '18.2107'
Tissue used: 'full endosperm'
AT5G65470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45975 x 10-1 35 28 11 13 55.56% 54.17% 63 24 TAIR8 Avg. embryo expression (dissected): '78.3087'
Avg. embryo expression (LCM): '59.6532'
AT5G65470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.81496 x 10-1 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 13 5 72.22% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0815 x 10-2 6 7 46.15% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65460 KAC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 3 4 66.67% 57.14% 6 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.4055'
Avg. expression score in LCM sample: '23.4579'
Tissue used: 'pure endosperm, no chalazal'
AT5G65460 KAC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.40405 x 10-1 7 1 1 3 87.50% 75.00% 8 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '37.488'
Avg. expression score in LCM sample: '23.4579'
Tissue used: 'full endosperm'
AT5G65460 KAC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 9 1 1 47.06% 50.00% 17 2 TAIR8 Avg. embryo expression (dissected): '58.0312'
Avg. embryo expression (LCM): '59.7914'
AT5G65460 KAC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.07692 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65460 KAC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.50649 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65460 KAC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.46124 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65450 UBP17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 50 24 34 63 67.57% 64.95% 74 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.200147'
Avg. expression score for this sample: '63.9423'
Avg. expression score in LCM sample: '63.2598'
Tissue used: 'pure endosperm, no chalazal'
AT5G65450 UBP17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9422 x 10-2 74 10 23 44 88.10% 65.67% 84 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.200147'
Avg. expression score for this sample: '39.2217'
Avg. expression score in LCM sample: '63.2598'
Tissue used: 'full endosperm'
AT5G65450 UBP17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.12817 x 10-1 53 25 29 28 67.95% 49.12% 78 57 TAIR8 Avg. embryo expression (dissected): '89.1575'
Avg. embryo expression (LCM): '63.8227'
AT5G65450 UBP17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.54272 x 10-1 15 9 62.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65450 UBP17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3721 x 10-2 114 24 82.61% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65450 UBP17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2 x 10-6 123 13 90.44% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65445 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65445 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65445 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G65445 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65445 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65445 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.44298 x 10-1 88 33 47 63 72.73% 57.27% 121 110 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.317234'
Avg. expression score for this sample: '164.878'
Avg. expression score in LCM sample: '111.528'
Tissue used: 'pure endosperm, no chalazal'
AT5G65440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.69942 x 10-1 215 76 100 205 73.88% 67.21% 291 305 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.317234'
Avg. expression score for this sample: '189.421'
Avg. expression score in LCM sample: '111.528'
Tissue used: 'full endosperm'
AT5G65440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.04649 x 10-1 57 40 12 11 58.76% 47.83% 97 23 TAIR8 Avg. embryo expression (dissected): '142.726'
Avg. embryo expression (LCM): '100.519'
AT5G65440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.69158 x 10-1 40 21 65.57% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0449 x 10-2 60 12 83.33% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.781 x 10-3 123 31 79.87% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65430 GRF8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.55682 x 10-1 18 10 11 31 64.29% 73.81% 28 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.369232'
Avg. expression score for this sample: '125.131'
Avg. expression score in LCM sample: '67.5516'
Tissue used: 'pure endosperm, no chalazal'
AT5G65430 GRF8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.43392 x 10-1 49 16 31 68 75.38% 68.69% 65 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.369232'
Avg. expression score for this sample: '196.565'
Avg. expression score in LCM sample: '67.5516'
Tissue used: 'full endosperm'
AT5G65430 GRF8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.11838 x 10-1 13 20 8 6 39.39% 42.86% 33 14 TAIR8 Avg. embryo expression (dissected): '111.138'
Avg. embryo expression (LCM): '91.9162'
AT5G65430 GRF8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8949 x 10-2 14 15 48.28% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65430 GRF8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 27 11 71.05% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65430 GRF8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.66 x 10-4 47 3 94.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65420 CYCD4;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.5671 1 2 2 1 33.33% 33.33% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.429569'
Avg. expression score for this sample: '7.81434'
Avg. expression score in LCM sample: '10.2885'
Tissue used: 'pure endosperm, no chalazal'
AT5G65420 CYCD4;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.66128 x 10-1 7 5 5 7 58.33% 58.33% 12 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.429569'
Avg. expression score for this sample: '18.4913'
Avg. expression score in LCM sample: '10.2885'
Tissue used: 'full endosperm'
AT5G65420 CYCD4;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 6 1 4 45.45% 80.00% 11 5 TAIR8 Avg. embryo expression (dissected): '25.1808'
Avg. embryo expression (LCM): '21.4877'
AT5G65420 CYCD4;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65420 CYCD4;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 100 90 52.63% 190 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65420 CYCD4;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.60624 x 10-1 171 116 59.58% 287 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65410 HB25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 2 50.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '68.4044'
Avg. expression score in LCM sample: '25.6479'
Tissue used: 'pure endosperm, no chalazal'
AT5G65410 HB25 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2381 x 10-1 0 3 1 1 0.00% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '34.8629'
Avg. expression score in LCM sample: '25.6479'
Tissue used: 'full endosperm'
AT5G65410 HB25 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 6 5 1 3 54.55% 75.00% 11 4 TAIR8 Avg. embryo expression (dissected): '362.04'
Avg. embryo expression (LCM): '330.969'
AT5G65410 HB25 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65410 HB25 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65410 HB25 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.83218'
Avg. expression score in LCM sample: '12.0964'
Tissue used: 'pure endosperm, no chalazal'
AT5G65400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.8217'
Avg. expression score in LCM sample: '12.0964'
Tissue used: 'full endosperm'
AT5G65400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.8939'
Avg. embryo expression (LCM): '14.2163'
AT5G65400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65390 AGP7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.0639'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65390 AGP7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.66085'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65390 AGP7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '97.2006'
Avg. embryo expression (LCM): '4.99831'
AT5G65390 AGP7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65390 AGP7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65390 AGP7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.4563 x 10-2 57 85 32 106 40.14% 76.81% 142 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000241'
Avg. expression score for this sample: '99.3448'
Avg. expression score in LCM sample: '33.6435'
Tissue used: 'pure endosperm, no chalazal'
AT5G65380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.527 x 10-3 112 144 59 156 43.75% 72.56% 256 215 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000241'
Avg. expression score for this sample: '110.613'
Avg. expression score in LCM sample: '33.6435'
Tissue used: 'full endosperm'
AT5G65380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.0416 x 10-2 177 363 96 193 32.78% 66.78% 540 289 TAIR8 Avg. embryo expression (dissected): '459.844'
Avg. embryo expression (LCM): '107.991'
AT5G65380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1 x 10-5 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1443 x 10-2 34 14 70.83% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 30 23 56.60% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.25549'
Avg. expression score in LCM sample: '48.1063'
Tissue used: 'pure endosperm, no chalazal'
AT5G65370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 3.23077 x 10-1 0 0 1 7 87.50% 0 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.64086'
Avg. expression score in LCM sample: '48.1063'
Tissue used: 'full endosperm'
AT5G65370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G65370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.30523 x 10-1 328 138 70.39% 466 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.91616 x 10-1 100 80 55.56% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 3 3 4 75.00% 57.14% 12 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.331878'
Avg. expression score for this sample: '833.317'
Avg. expression score in LCM sample: '565.929'
Tissue used: 'pure endosperm, no chalazal'
AT5G65360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.5598 x 10-2 1 0 11 4 100.00% 26.67% 1 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.331878'
Avg. expression score for this sample: '412.882'
Avg. expression score in LCM sample: '565.929'
Tissue used: 'full endosperm'
AT5G65360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.11053 x 10-1 21 14 3 4 60.00% 57.14% 35 7 TAIR8 Avg. embryo expression (dissected): '3419.33'
Avg. embryo expression (LCM): '5625.28'
AT5G65360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.76959 x 10-1 8 11 42.11% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.34 x 10-4 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65350 HTR11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.87607 x 10-1 12 1 3 6 92.31% 66.67% 13 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323359'
Avg. expression score for this sample: '24.7658'
Avg. expression score in LCM sample: '2.39576'
Tissue used: 'pure endosperm, no chalazal'
AT5G65350 HTR11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 25 1 10 1 96.15% 9.09% 26 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323359'
Avg. expression score for this sample: '30.2238'
Avg. expression score in LCM sample: '2.39576'
Tissue used: 'full endosperm'
AT5G65350 HTR11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.1002 x 10-2 41 8 8 0 83.67% 0.00% 49 8 TAIR8 Avg. embryo expression (dissected): '93.1981'
Avg. embryo expression (LCM): '104.312'
AT5G65350 HTR11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.66667 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65350 HTR11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65350 HTR11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.22474 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.46226'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G65340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'