| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G15810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.45869 x 10-1 | 23 | 22 | 13 | 35 | 51.11% | 72.92% | 45 | 48 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.561776' Avg. expression score for this sample: '118.059' Avg. expression score in LCM sample: '93.1113' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G15810 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.0 x 10-9 | 213 | 29 | 88.02% | 242 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.5 x 10-5 | 153 | 29 | 84.07% | 182 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15810 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.57187 x 10-1 | 23 | 8 | 74.19% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15810 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.55304 x 10-1 | 153 | 61 | 77 | 165 | 71.50% | 68.18% | 214 | 242 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.561776' Avg. expression score for this sample: '236.584' Avg. expression score in LCM sample: '93.1113' Tissue used: 'full endosperm' |
|||||
| AT1G15810 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.93718 x 10-1 | 34 | 48 | 9 | 20 | 41.46% | 68.97% | 82 | 29 | TAIR8 |
Avg. embryo expression (dissected): '172.554' Avg. embryo expression (LCM): '263.378' |
||||
| AT1G15800 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 9 | 6 | 11 | 40.00% | 64.71% | 15 | 17 | TAIR8 |
Avg. embryo expression (dissected): '30.7164' Avg. embryo expression (LCM): '13.0107' |
||||
| AT1G15800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.3595 x 10-2 | 31 | 1 | 96.88% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.351 x 10-3 | 26 | 2 | 4 | 27 | 92.86% | 87.10% | 28 | 31 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.040983' Avg. expression score for this sample: '25.2227' Avg. expression score in LCM sample: '1.3816' Tissue used: 'full endosperm' |
|||||
| AT1G15800 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.29767 x 10-1 | 14 | 2 | 87.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.78551 x 10-1 | 8 | 3 | 8 | 8 | 72.73% | 50.00% | 11 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.040983' Avg. expression score for this sample: '13.6249' Avg. expression score in LCM sample: '1.3816' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G15800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.73344 x 10-1 | 26 | 9 | 74.29% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.22367' Avg. expression score in LCM sample: '3.85085' Tissue used: 'full endosperm' |
|||||||
| AT1G15790 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '4.93552' |
||||||
| AT1G15790 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15790 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.34248' Avg. expression score in LCM sample: '3.85085' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G15790 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15780 | NRB4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.17 x 10-4 | 361 | 67 | 84.35% | 428 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15780 | NRB4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.88759 x 10-1 | 76 | 67 | 26 | 142 | 53.15% | 84.52% | 143 | 168 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000086' Avg. expression score for this sample: '119.704' Avg. expression score in LCM sample: '83.4989' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G15780 | NRB4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.2 x 10-10 | 332 | 34 | 90.71% | 366 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15780 | NRB4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.80107 x 10-1 | 58 | 21 | 73.42% | 79 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15780 | NRB4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2 x 10-5 | 119 | 71 | 24 | 252 | 62.63% | 91.30% | 190 | 276 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000086' Avg. expression score for this sample: '141.719' Avg. expression score in LCM sample: '83.4989' Tissue used: 'full endosperm' |
||||
| AT1G15780 | NRB4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.2506 x 10-2 | 33 | 67 | 32 | 28 | 33.00% | 46.67% | 100 | 60 | TAIR8 |
Avg. embryo expression (dissected): '110.602' Avg. embryo expression (LCM): '63.9734' |
|||
| AT1G15772 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.612491' Avg. embryo expression (LCM): '0' |
||||||
| AT1G15772 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15772 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 0 | 2 | 1 | 100.00% | 33.33% | 5 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '48.0091' Avg. expression score in LCM sample: '6.20252' Tissue used: 'full endosperm' |
|||||
| AT1G15772 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '17.2473' Avg. expression score in LCM sample: '6.20252' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G15772 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15772 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.383321' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G15770 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.67333' Avg. embryo expression (LCM): '0' |
||||||
| AT1G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15770 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 1 | 1 | 0.00% | 50.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.70039' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 2 | 66.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 1 | 3 | 75.00% | 0 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.12223' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G15760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.58143 x 10-1 | 7 | 14 | 4 | 1 | 33.33% | 20.00% | 21 | 5 | TAIR8 |
Avg. embryo expression (dissected): '20.9246' Avg. embryo expression (LCM): '61.964' |
||||
| AT1G15757 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.11678' Avg. embryo expression (LCM): '0' |
||||||
| AT1G15757 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15757 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '51.8988' Avg. expression score in LCM sample: '35.275' Tissue used: 'full endosperm' |
|||||||
| AT1G15757 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15757 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '40.2788' Avg. expression score in LCM sample: '35.275' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G15757 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15750 | TPL | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.72652 x 10-1 | 32 | 7 | 82.05% | 39 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15750 | TPL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.59294 x 10-1 | 21 | 5 | 12 | 24 | 80.77% | 66.67% | 26 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.417317' Avg. expression score for this sample: '73.9294' Avg. expression score in LCM sample: '78.0018' Tissue used: 'full endosperm' |
||||
| AT1G15750 | TPL | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.52705 x 10-1 | 22 | 19 | 12 | 5 | 53.66% | 29.41% | 41 | 17 | TAIR8 |
Avg. embryo expression (dissected): '149.734' Avg. embryo expression (LCM): '110.867' |
|||
| AT1G15750 | TPL | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.88914 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15750 | TPL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.64807 x 10-1 | 10 | 4 | 3 | 12 | 71.43% | 80.00% | 14 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.417317' Avg. expression score for this sample: '67.0835' Avg. expression score in LCM sample: '78.0018' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G15750 | TPL | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.31 x 10-4 | 82 | 6 | 93.18% | 88 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.30288 x 10-1 | 21 | 1 | 95.45% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 2 | 1 | 2 | 33.33% | 66.67% | 3 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.170634' Avg. expression score for this sample: '68.0312' Avg. expression score in LCM sample: '52.8831' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '32.0113' Avg. embryo expression (LCM): '6.61837' |
||||
| AT1G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.46847 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.6287 x 10-2 | 11 | 1 | 2 | 15 | 91.67% | 88.24% | 12 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.170634' Avg. expression score for this sample: '180.975' Avg. expression score in LCM sample: '52.8831' Tissue used: 'full endosperm' |
|||||
| AT1G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.30905 x 10-1 | 112 | 25 | 81 | 147 | 81.75% | 64.47% | 137 | 228 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.151566' Avg. expression score for this sample: '125.621' Avg. expression score in LCM sample: '12.5667' Tissue used: 'full endosperm' |
|||||
| AT1G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.1311 x 10-2 | 30 | 24 | 55.56% | 54 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.58226 x 10-1 | 145 | 36 | 67 | 91 | 80.11% | 57.59% | 181 | 158 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.151566' Avg. expression score for this sample: '124.654' Avg. expression score in LCM sample: '12.5667' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.994 x 10-3 | 62 | 11 | 84.93% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15730 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.1701 x 10-1 | 127 | 91 | 46 | 23 | 58.26% | 33.33% | 218 | 69 | TAIR8 |
Avg. embryo expression (dissected): '148.757' Avg. embryo expression (LCM): '85.0467' |
||||
| AT1G15730 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.64649 x 10-1 | 39 | 18 | 68.42% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15720 | TRFL5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.191 x 10-3 | 98 | 69 | 58.68% | 167 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15720 | TRFL5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.69214 x 10-1 | 161 | 87 | 66 | 30 | 64.92% | 31.25% | 248 | 96 | TAIR8 |
Avg. embryo expression (dissected): '101.774' Avg. embryo expression (LCM): '81.6559' |
|||
| AT1G15720 | TRFL5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.09884 x 10-1 | 63 | 27 | 70.00% | 90 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15720 | TRFL5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.429 x 10-3 | 387 | 113 | 122 | 241 | 77.40% | 66.39% | 500 | 363 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.012655' Avg. expression score for this sample: '107.367' Avg. expression score in LCM sample: '31.189' Tissue used: 'full endosperm' |
||||
| AT1G15720 | TRFL5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.8 x 10-11 | 433 | 71 | 85.91% | 504 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15720 | TRFL5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.06789 x 10-1 | 158 | 57 | 71 | 116 | 73.49% | 62.03% | 215 | 187 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.012655' Avg. expression score for this sample: '73.676' Avg. expression score in LCM sample: '31.189' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.68406 x 10-1 | 32 | 17 | 23 | 35 | 65.31% | 60.34% | 49 | 58 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.552419' Avg. expression score for this sample: '154.516' Avg. expression score in LCM sample: '126.167' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.73 x 10-4 | 74 | 11 | 87.06% | 85 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.58721 x 10-1 | 30 | 50 | 9 | 12 | 37.50% | 57.14% | 80 | 21 | TAIR8 |
Avg. embryo expression (dissected): '298.208' Avg. embryo expression (LCM): '220.34' |
||||
| AT1G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.269 x 10-3 | 46 | 5 | 90.20% | 51 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.05188 x 10-1 | 58 | 15 | 43 | 96 | 79.45% | 69.06% | 73 | 139 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.552419' Avg. expression score for this sample: '225.407' Avg. expression score in LCM sample: '126.167' Tissue used: 'full endosperm' |
|||||
| AT1G15710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.35435 x 10-1 | 14 | 8 | 63.64% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15700 | ATPC2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15700 | ATPC2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 0 | 1 | 3 | 100.00% | 75.00% | 3 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '214.382' Avg. expression score in LCM sample: '87.0851' Tissue used: 'full endosperm' |
||||
| AT1G15700 | ATPC2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15700 | ATPC2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '216.008' Avg. expression score in LCM sample: '87.0851' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G15700 | ATPC2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15700 | ATPC2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '338.261' Avg. embryo expression (LCM): '241.313' |
|||||
| AT1G15690 | AVP1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.74372 x 10-1 | 259 | 304 | 60 | 97 | 46.00% | 61.78% | 563 | 157 | TAIR8 |
Avg. embryo expression (dissected): '2344.42' Avg. embryo expression (LCM): '1558' |
|||
| AT1G15690 | AVP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-18 | 2037 | 386 | 84.07% | 2423 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15690 | AVP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.4 x 10-6 | 247 | 130 | 157 | 646 | 65.52% | 80.45% | 377 | 803 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.8e-07' Avg. expression score for this sample: '1984.14' Avg. expression score in LCM sample: '2548.21' Tissue used: 'full endosperm' |
||||
| AT1G15690 | AVP1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.1 x 10-7 | 163 | 19 | 89.56% | 182 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15690 | AVP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.7253 x 10-2 | 284 | 150 | 155 | 469 | 65.44% | 75.16% | 434 | 624 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.8e-07' Avg. expression score for this sample: '1982.06' Avg. expression score in LCM sample: '2548.21' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G15690 | AVP1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.2 x 10-15 | 1250 | 234 | 84.23% | 1484 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G15680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.166667' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G15680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.23565' Avg. embryo expression (LCM): '0' |
|||||
| AT1G15680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G15680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.66667 x 10-1 | 0 | 5 | 0 | 0 | 0.00% | 5 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.166667' Avg. expression score for this sample: '.881142' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G15670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.6048 x 10-2 | 19 | 1 | 4 | 9 | 95.00% | 69.23% | 20 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.110621' Avg. expression score for this sample: '27.9611' Avg. expression score in LCM sample: '2.86609' Tissue used: 'full endosperm' |
|||||
| AT1G15670 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G15670 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 1 | 3 | 3 | 87.50% | 50.00% | 8 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.110621' Avg. expression score for this sample: '22.6401' Avg. expression score in LCM sample: '2.86609' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G15670 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0241 x 10-2 | 30 | 0 | 100.00% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |