Displaying data sets 159401 - 159500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G16120 WAKL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.11499'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'pure endosperm, no chalazal'
AT1G16120 WAKL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16110 WAKL6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16110 WAKL6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16110 WAKL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.31178'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G16110 WAKL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.34648'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G16110 WAKL6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16110 WAKL6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.49722'
Avg. embryo expression (LCM): '0'
AT1G16100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G16100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G16100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G16090 WAKL7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.6162'
Avg. expression score in LCM sample: '1.13174'
Tissue used: 'full endosperm'
AT1G16090 WAKL7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16090 WAKL7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '30.9291'
Avg. embryo expression (LCM): '20.2068'
AT1G16090 WAKL7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16090 WAKL7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.68301'
Avg. expression score in LCM sample: '1.13174'
Tissue used: 'pure endosperm, no chalazal'
AT1G16090 WAKL7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.63869 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 1 2 80.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.821253'
Avg. expression score for this sample: '30.0367'
Avg. expression score in LCM sample: '16.0795'
Tissue used: 'pure endosperm, no chalazal'
AT1G16080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.04933 x 10-1 16 3 11 5 84.21% 31.25% 19 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.821253'
Avg. expression score for this sample: '27.8328'
Avg. expression score in LCM sample: '16.0795'
Tissue used: 'full endosperm'
AT1G16080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 11 1 0 50.00% 0.00% 22 1 TAIR8 Avg. embryo expression (dissected): '96.2515'
Avg. embryo expression (LCM): '120.675'
AT1G16080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16070 TLP8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16070 TLP8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '45.1699'
Avg. embryo expression (LCM): '34.9882'
AT1G16070 TLP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.1875'
Avg. expression score in LCM sample: '5.54111'
Tissue used: 'pure endosperm, no chalazal'
AT1G16070 TLP8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16070 TLP8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16070 TLP8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.50916'
Avg. expression score in LCM sample: '5.54111'
Tissue used: 'full endosperm'
AT1G16060 ADAP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 3 0 100.00% 0.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.0543'
Avg. expression score in LCM sample: '3.64508'
Tissue used: 'full endosperm'
AT1G16060 ADAP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.48869'
Avg. embryo expression (LCM): '1.04236'
AT1G16060 ADAP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16060 ADAP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16060 ADAP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.84189'
Avg. expression score in LCM sample: '3.64508'
Tissue used: 'pure endosperm, no chalazal'
AT1G16060 ADAP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.64286 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.60222 x 10-1 189 54 77.78% 243 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9083 x 10-2 134 25 84.28% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.03035 x 10-1 56 26 26 42 68.29% 61.76% 82 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009523'
Avg. expression score for this sample: '66.7176'
Avg. expression score in LCM sample: '34.9957'
Tissue used: 'pure endosperm, no chalazal'
AT1G16040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.93 x 10-4 74 18 21 108 80.43% 83.72% 92 129 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009523'
Avg. expression score for this sample: '67.3935'
Avg. expression score in LCM sample: '34.9957'
Tissue used: 'full endosperm'
AT1G16040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.3093 x 10-1 23 8 74.19% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 56 50 16 8 52.83% 33.33% 106 24 TAIR8 Avg. embryo expression (dissected): '78.7138'
Avg. embryo expression (LCM): '85.2225'
AT1G16030 Hsp70b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87754 x 10-1 82 18 82.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16030 Hsp70b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.51798 x 10-1 106 41 40 108 72.11% 72.97% 147 148 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-07'
Avg. expression score for this sample: '3602.34'
Avg. expression score in LCM sample: '17.0349'
Tissue used: 'pure endosperm, no chalazal'
AT1G16030 Hsp70b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0898 x 10-2 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16030 Hsp70b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.69 x 10-4 160 16 90.91% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16030 Hsp70b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0 x 10-9 137 39 14 173 77.84% 92.51% 176 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.6e-07'
Avg. expression score for this sample: '2088.77'
Avg. expression score in LCM sample: '17.0349'
Tissue used: 'full endosperm'
AT1G16030 Hsp70b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.99011 x 10-1 10 9 3 7 52.63% 70.00% 19 10 TAIR8 Avg. embryo expression (dissected): '630.568'
Avg. embryo expression (LCM): '27.5033'
AT1G16025 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '22.9371'
Avg. embryo expression (LCM): '0'
AT1G16025 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.0391'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G16025 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16025 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16025 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.8182'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G16025 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16022 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16022 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16022 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.8531'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G16022 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '45.1873'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G16022 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '28.2413'
Avg. embryo expression (LCM): '0'
AT1G16022 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '67.7193'
Avg. expression score in LCM sample: '32.9674'
Tissue used: 'pure endosperm, no chalazal'
AT1G16020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.25 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '112.989'
Avg. embryo expression (LCM): '94.7168'
AT1G16020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '69.6113'
Avg. expression score in LCM sample: '32.9674'
Tissue used: 'full endosperm'
AT1G16010 MGT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4294 x 10-2 120 33 56 132 78.43% 70.21% 153 188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00075'
Avg. expression score for this sample: '236.974'
Avg. expression score in LCM sample: '140.468'
Tissue used: 'full endosperm'
AT1G16010 MGT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.03375 x 10-1 43 41 26 19 51.19% 42.22% 84 45 TAIR8 Avg. embryo expression (dissected): '204.702'
Avg. embryo expression (LCM): '179.299'
AT1G16010 MGT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.28466 x 10-1 41 8 83.67% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16010 MGT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-7 250 31 88.97% 281 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16010 MGT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.169 x 10-3 162 29 62 124 84.82% 66.67% 191 186 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00075'
Avg. expression score for this sample: '242.963'
Avg. expression score in LCM sample: '140.468'
Tissue used: 'pure endosperm, no chalazal'
AT1G16010 MGT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7222 x 10-2 230 55 80.70% 285 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.91516 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.73155 x 10-1 23 3 88.46% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G16000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 1 100.00% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.749447'
Avg. expression score for this sample: '38.3092'
Avg. expression score in LCM sample: '8.61298'
Tissue used: 'pure endosperm, no chalazal'
AT1G16000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 9 0 1 50.00% 100.00% 18 1 TAIR8 Avg. embryo expression (dissected): '228.329'
Avg. embryo expression (LCM): '269.808'
AT1G16000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 2 3 10 60.00% 76.92% 5 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.749447'
Avg. expression score for this sample: '52.2366'
Avg. expression score in LCM sample: '8.61298'
Tissue used: 'full endosperm'
AT1G16000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.49 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15990 CNGC7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15990 CNGC7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G15990 CNGC7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15990 CNGC7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15990 CNGC7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.82545'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G15990 CNGC7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.89681'
Avg. embryo expression (LCM): '0'
AT1G15980 PnsB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 4 1 0 50.00% 0.00% 8 1 TAIR8 Avg. embryo expression (dissected): '9.69804'
Avg. embryo expression (LCM): '2.41125'
AT1G15980 PnsB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.74625 x 10-1 21 6 0 10 77.78% 100.00% 27 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162202'
Avg. expression score for this sample: '12.2683'
Avg. expression score in LCM sample: '2.822'
Tissue used: 'full endosperm'
AT1G15980 PnsB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15980 PnsB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15980 PnsB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 0 4 57.14% 100.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162202'
Avg. expression score for this sample: '12.2183'
Avg. expression score in LCM sample: '2.822'
Tissue used: 'pure endosperm, no chalazal'
AT1G15980 PnsB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-6 37 1 97.37% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-10 63 1 98.44% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.43437 x 10-1 54 33 27 78 62.07% 74.29% 87 105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.452653'
Avg. expression score for this sample: '100.298'
Avg. expression score in LCM sample: '16.006'
Tissue used: 'pure endosperm, no chalazal'
AT1G15970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.88612 x 10-1 80 46 64 92 63.49% 58.97% 126 156 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.452653'
Avg. expression score for this sample: '86.9476'
Avg. expression score in LCM sample: '16.006'
Tissue used: 'full endosperm'
AT1G15970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 18 25 2 7 41.86% 77.78% 43 9 TAIR8 Avg. embryo expression (dissected): '42.1074'
Avg. embryo expression (LCM): '26.5865'
AT1G15970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4664 x 10-2 22 4 84.62% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15960 NRAMP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.13701 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G15960 NRAMP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54545 x 10-1 4 0 0 2 100.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.02835'
Avg. expression score for this sample: '51.9937'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'pure endosperm, no chalazal'