Displaying data sets 15801 - 15900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G44190 GLK2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0528 x 10-2 207 351 83 126 37.10% 60.29% 558 209 TAIR8 Avg. embryo expression (dissected): '448.725'
Avg. embryo expression (LCM): '285.469'
AT5G44190 GLK2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.3 x 10-13 70 14 83.33% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44190 GLK2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.44619 x 10-1 11 8 57.89% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44190 GLK2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.5487 x 10-2 29 23 55.77% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44180 RLT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.80097 x 10-1 108 31 52 79 77.70% 60.31% 139 131 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004171'
Avg. expression score for this sample: '247.359'
Avg. expression score in LCM sample: '73.6806'
Tissue used: 'pure endosperm, no chalazal'
AT5G44180 RLT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.639 x 10-3 159 50 59 190 76.08% 76.31% 209 249 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004171'
Avg. expression score for this sample: '292.485'
Avg. expression score in LCM sample: '73.6806'
Tissue used: 'full endosperm'
AT5G44180 RLT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7525 x 10-1 142 105 45 38 57.49% 45.78% 247 83 TAIR8 Avg. embryo expression (dissected): '433.405'
Avg. embryo expression (LCM): '315.057'
AT5G44180 RLT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.13117 x 10-1 41 11 78.85% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44180 RLT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-7 169 17 90.86% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44180 RLT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1 x 10-13 343 33 91.22% 376 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.59636 x 10-1 12 3 3 11 80.00% 78.57% 15 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.393294'
Avg. expression score for this sample: '140.744'
Avg. expression score in LCM sample: '60.0851'
Tissue used: 'pure endosperm, no chalazal'
AT5G44170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 4 3 11 60.00% 78.57% 10 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.393294'
Avg. expression score for this sample: '74.223'
Avg. expression score in LCM sample: '60.0851'
Tissue used: 'full endosperm'
AT5G44170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 9 1 1 52.63% 50.00% 19 2 TAIR8 Avg. embryo expression (dissected): '116.83'
Avg. embryo expression (LCM): '163.751'
AT5G44170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 5 73.68% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.32002 x 10-1 18 3 85.71% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44160 NUC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.297983'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'pure endosperm, no chalazal'
AT5G44160 NUC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.31539'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'full endosperm'
AT5G44160 NUC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '8.5646'
Avg. embryo expression (LCM): '15.3215'
AT5G44160 NUC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44160 NUC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44160 NUC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '33.5862'
Avg. expression score in LCM sample: '32.4089'
Tissue used: 'pure endosperm, no chalazal'
AT5G44150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '67.9754'
Avg. expression score in LCM sample: '32.4089'
Tissue used: 'full endosperm'
AT5G44150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '44.0881'
Avg. embryo expression (LCM): '48.7022'
AT5G44150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44140 PHB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.17208'
Avg. expression score in LCM sample: '5.30595'
Tissue used: 'pure endosperm, no chalazal'
AT5G44140 PHB7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.50473'
Avg. expression score in LCM sample: '5.30595'
Tissue used: 'full endosperm'
AT5G44140 PHB7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '14.3338'
Avg. embryo expression (LCM): '0'
AT5G44140 PHB7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44140 PHB7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44140 PHB7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44130 FLA13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.566176'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44130 FLA13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.90611'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44130 FLA13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.58471'
Avg. embryo expression (LCM): '0'
AT5G44130 FLA13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44130 FLA13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44130 FLA13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44120 CRA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.9 x 10-21 3249 879 313 400 78.71% 56.10% 4128 713 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.120538'
Avg. expression score for this sample: '2869.1'
Avg. expression score in LCM sample: '80.5005'
Tissue used: 'pure endosperm, no chalazal'
AT5G44120 CRA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.8658 x 10-2 12594 4104 4874 4647 75.42% 48.81% 16698 9521 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.120538'
Avg. expression score for this sample: '9780.02'
Avg. expression score in LCM sample: '80.5005'
Tissue used: 'full endosperm'
AT5G44120 CRA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.664 x 10-3 3674 3297 851 872 52.70% 50.61% 6971 1723 TAIR8 Avg. embryo expression (dissected): '7220.78'
Avg. embryo expression (LCM): '112.048'
AT5G44120 CRA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 1226 1050 53.87% 2276 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44120 CRA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-7 96 101 48.73% 197 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44120 CRA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2 x 10-4 129 102 55.84% 231 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44110 ABCI21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '45.0954'
Avg. expression score in LCM sample: '20.5918'
Tissue used: 'pure endosperm, no chalazal'
AT5G44110 ABCI21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '90.9293'
Avg. expression score in LCM sample: '20.5918'
Tissue used: 'full endosperm'
AT5G44110 ABCI21 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '123.647'
Avg. embryo expression (LCM): '55.107'
AT5G44110 ABCI21 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44110 ABCI21 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44110 ABCI21 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44100 ckl7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.07678 x 10-1 6 4 5 4 60.00% 44.44% 10 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.897875'
Avg. expression score for this sample: '98.0192'
Avg. expression score in LCM sample: '61.2462'
Tissue used: 'pure endosperm, no chalazal'
AT5G44100 ckl7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 42 9 29 36 82.35% 55.38% 51 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.897875'
Avg. expression score for this sample: '148.468'
Avg. expression score in LCM sample: '61.2462'
Tissue used: 'full endosperm'
AT5G44100 ckl7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 7 4 0 2 63.64% 100.00% 11 2 TAIR8 Avg. embryo expression (dissected): '96.8194'
Avg. embryo expression (LCM): '58.6486'
AT5G44100 ckl7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44100 ckl7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.21181 x 10-1 46 19 70.77% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44100 ckl7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-5 68 6 91.89% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.482'
Avg. expression score in LCM sample: '38.9936'
Tissue used: 'pure endosperm, no chalazal'
AT5G44090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '114.56'
Avg. expression score in LCM sample: '38.9936'
Tissue used: 'full endosperm'
AT5G44090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '77.5752'
Avg. embryo expression (LCM): '61.5119'
AT5G44090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 57 33 24 55 63.33% 69.62% 90 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.349889'
Avg. expression score for this sample: '189.427'
Avg. expression score in LCM sample: '85.4684'
Tissue used: 'pure endosperm, no chalazal'
AT5G44080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.68932 x 10-1 69 35 22 86 66.35% 79.63% 104 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.349889'
Avg. expression score for this sample: '213.648'
Avg. expression score in LCM sample: '85.4684'
Tissue used: 'full endosperm'
AT5G44080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.01067 x 10-1 35 36 24 31 49.30% 56.36% 71 55 TAIR8 Avg. embryo expression (dissected): '249.734'
Avg. embryo expression (LCM): '247.881'
AT5G44080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.4232 x 10-1 27 8 77.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.36909 x 10-1 67 20 77.01% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-9 150 12 92.59% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44070 CAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.202126'
Avg. expression score for this sample: '33.943'
Avg. expression score in LCM sample: '10.7736'
Tissue used: 'pure endosperm, no chalazal'
AT5G44070 CAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.20891 x 10-1 10 3 1 11 76.92% 91.67% 13 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.202126'
Avg. expression score for this sample: '77.5538'
Avg. expression score in LCM sample: '10.7736'
Tissue used: 'full endosperm'
AT5G44070 CAD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 4 1 1 33.33% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '48.3414'
Avg. embryo expression (LCM): '37.525'
AT5G44070 CAD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44070 CAD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.44815 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44070 CAD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1365 x 10-2 31 0 100.00% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.39112'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44065 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44065 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44065 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44065 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.17468 x 10-1 143 12 70 57 92.26% 44.88% 155 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000067'
Avg. expression score for this sample: '138.867'
Avg. expression score in LCM sample: '27.7644'
Tissue used: 'pure endosperm, no chalazal'
AT5G44060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-5 290 31 74 101 90.34% 57.71% 321 175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000067'
Avg. expression score for this sample: '169.631'
Avg. expression score in LCM sample: '27.7644'
Tissue used: 'full endosperm'
AT5G44060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.07499 x 10-1 50 26 25 11 65.79% 30.56% 76 36 TAIR8 Avg. embryo expression (dissected): '105.336'
Avg. embryo expression (LCM): '44.6583'
AT5G44060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 33 10 76.74% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7 x 10-12 139 127 52.26% 266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-14 278 15 94.88% 293 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 21 5 8 9 80.77% 52.94% 26 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.580368'
Avg. expression score for this sample: '37.6536'
Avg. expression score in LCM sample: '48.4884'
Tissue used: 'pure endosperm, no chalazal'
AT5G44050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84085 x 10-1 14 1 5 7 93.33% 58.33% 15 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.580368'
Avg. expression score for this sample: '17.7831'
Avg. expression score in LCM sample: '48.4884'
Tissue used: 'full endosperm'
AT5G44050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 6 2 3 53.85% 60.00% 13 5 TAIR8 Avg. embryo expression (dissected): '32.942'
Avg. embryo expression (LCM): '6.90722'
AT5G44050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7466 x 10-2 2 5 28.57% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.1576 x 10-2 1661 845 661 1067 66.28% 61.75% 2506 1728 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013311'
Avg. expression score for this sample: '956.925'
Avg. expression score in LCM sample: '507.622'
Tissue used: 'pure endosperm, no chalazal'
AT5G44040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.56533 x 10-1 1486 882 948 1968 62.75% 67.49% 2368 2916 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.013311'
Avg. expression score for this sample: '774.657'
Avg. expression score in LCM sample: '507.622'
Tissue used: 'full endosperm'
AT5G44040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.39968 x 10-1 1788 1810 530 519 49.69% 49.48% 3598 1049 TAIR8 Avg. embryo expression (dissected): '1632.73'
Avg. embryo expression (LCM): '940.612'
AT5G44040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.28704 x 10-1 249 112 68.98% 361 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.9 x 10-6 258 76 77.25% 334 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-7 451 150 75.04% 601 TAIR8 Mutant effect: 'N/A (not a MEG)'