Displaying data sets 158501 - 158600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G17570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G17570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17560 HLL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.29225 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17560 HLL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0009 109 26 80.74% 135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17560 HLL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.76243 x 10-1 73 31 70.19% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17560 HLL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 38 37 6 7 50.67% 53.85% 75 13 TAIR8 Avg. embryo expression (dissected): '143.52'
Avg. embryo expression (LCM): '244.867'
AT1G17560 HLL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 6 23 46 62.50% 66.67% 16 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.534585'
Avg. expression score for this sample: '57.9223'
Avg. expression score in LCM sample: '8.37781'
Tissue used: 'full endosperm'
AT1G17560 HLL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.39752 x 10-1 15 14 10 18 51.72% 64.29% 29 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.534585'
Avg. expression score for this sample: '69.9229'
Avg. expression score in LCM sample: '8.37781'
Tissue used: 'pure endosperm, no chalazal'
AT1G17550 HAB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.976 x 10-2 108 29 33 90 78.83% 73.17% 137 123 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-13'
Avg. expression score for this sample: '120.577'
Avg. expression score in LCM sample: '37.9941'
Tissue used: 'pure endosperm, no chalazal'
AT1G17550 HAB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.00044 x 10-1 60 63 34 25 48.78% 42.37% 123 59 TAIR8 Avg. embryo expression (dissected): '146.729'
Avg. embryo expression (LCM): '68.0173'
AT1G17550 HAB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-12 430 116 123 500 78.75% 80.26% 546 623 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.2e-13'
Avg. expression score for this sample: '292.656'
Avg. expression score in LCM sample: '37.9941'
Tissue used: 'full endosperm'
AT1G17550 HAB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.516 x 10-3 125 17 88.03% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17550 HAB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.5 x 10-29 678 29 95.90% 707 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17550 HAB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.7 x 10-21 327 8 97.61% 335 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17545 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17545 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17545 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G17545 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G17545 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.38629'
Avg. embryo expression (LCM): '0'
AT1G17545 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '3.78167'
Avg. embryo expression (LCM): '1.95914'
AT1G17540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 0 1 75.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.72524'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'full endosperm'
AT1G17540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.09859 x 10-1 0 1 4 5 0.00% 55.56% 1 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.88557'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'pure endosperm, no chalazal'
AT1G17530 TIM23-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2866.42'
Avg. expression score in LCM sample: '619.826'
Tissue used: 'pure endosperm, no chalazal'
AT1G17530 TIM23-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3373.73'
Avg. embryo expression (LCM): '856.859'
AT1G17530 TIM23-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '960.668'
Avg. expression score in LCM sample: '619.826'
Tissue used: 'full endosperm'
AT1G17530 TIM23-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17530 TIM23-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17530 TIM23-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '93.142'
Avg. expression score in LCM sample: '27.9113'
Tissue used: 'full endosperm'
AT1G17520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '81.6309'
Avg. expression score in LCM sample: '27.9113'
Tissue used: 'pure endosperm, no chalazal'
AT1G17520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '76.4977'
Avg. embryo expression (LCM): '66.0456'
AT1G17520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '219.7'
Avg. embryo expression (LCM): '186.96'
AT1G17510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '139.997'
Avg. expression score in LCM sample: '143.657'
Tissue used: 'full endosperm'
AT1G17510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '191.779'
Avg. expression score in LCM sample: '143.657'
Tissue used: 'pure endosperm, no chalazal'
AT1G17500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.74837 x 10-1 46 22 11 52 67.65% 82.54% 68 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.130911'
Avg. expression score for this sample: '63.3061'
Avg. expression score in LCM sample: '30.5717'
Tissue used: 'pure endosperm, no chalazal'
AT1G17500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.1921 x 10-2 67 94 14 7 41.61% 33.33% 161 21 TAIR8 Avg. embryo expression (dissected): '125.372'
Avg. embryo expression (LCM): '110.515'
AT1G17500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.11126 x 10-1 34 17 22 62 66.67% 73.81% 51 84 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.130911'
Avg. expression score for this sample: '95.7456'
Avg. expression score in LCM sample: '30.5717'
Tissue used: 'full endosperm'
AT1G17500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.70913 x 10-1 15 10 60.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-6 58 1 98.31% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.694 x 10-2 28 3 90.32% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2205.7'
Avg. expression score in LCM sample: '155.533'
Tissue used: 'full endosperm'
AT1G17490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '928.414'
Avg. expression score in LCM sample: '155.533'
Tissue used: 'pure endosperm, no chalazal'
AT1G17490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1027.38'
Avg. embryo expression (LCM): '744.209'
AT1G17490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17480 IQD7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17480 IQD7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17480 IQD7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '75.1771'
Avg. embryo expression (LCM): '51.6409'
AT1G17480 IQD7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17480 IQD7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.2647'
Avg. expression score in LCM sample: '26.1917'
Tissue used: 'full endosperm'
AT1G17480 IQD7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '30.4162'
Avg. expression score in LCM sample: '26.1917'
Tissue used: 'pure endosperm, no chalazal'
AT1G17470 DRG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '53.1267'
Avg. expression score in LCM sample: '36.7154'
Tissue used: 'pure endosperm, no chalazal'
AT1G17470 DRG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '62.7882'
Avg. expression score in LCM sample: '36.7154'
Tissue used: 'full endosperm'
AT1G17470 DRG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17470 DRG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17470 DRG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17470 DRG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '65.6725'
Avg. embryo expression (LCM): '68.3815'
AT1G17460 TRFL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 4 8 2 1 33.33% 33.33% 12 3 TAIR8 Avg. embryo expression (dissected): '7.72963'
Avg. embryo expression (LCM): '12.7595'
AT1G17460 TRFL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.9888 x 10-2 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17460 TRFL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.40311 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17460 TRFL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.07611 x 10-1 12 9 2 17 57.14% 89.47% 21 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.8329'
Avg. expression score in LCM sample: '7.46654'
Tissue used: 'full endosperm'
AT1G17460 TRFL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 7 7 17 53.33% 70.83% 15 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.8486'
Avg. expression score in LCM sample: '7.46654'
Tissue used: 'pure endosperm, no chalazal'
AT1G17460 TRFL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.61793 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17455 ELF4-L4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17455 ELF4-L4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17455 ELF4-L4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '3.7958'
Avg. embryo expression (LCM): '4.65923'
AT1G17455 ELF4-L4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17455 ELF4-L4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.80573'
Avg. expression score in LCM sample: '9.09801'
Tissue used: 'pure endosperm, no chalazal'
AT1G17455 ELF4-L4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.75374'
Avg. expression score in LCM sample: '9.09801'
Tissue used: 'full endosperm'
AT1G17450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 3 0 8 25.00% 100.00% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685082'
Avg. expression score for this sample: '82.6852'
Avg. expression score in LCM sample: '43.7263'
Tissue used: 'full endosperm'
AT1G17450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685082'
Avg. expression score for this sample: '39.5468'
Avg. expression score in LCM sample: '43.7263'
Tissue used: 'pure endosperm, no chalazal'
AT1G17450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.89182 x 10-1 5 5 50.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '78.8594'
Avg. embryo expression (LCM): '76.7831'
AT1G17440 EER4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.54117 x 10-1 20 10 7 2 66.67% 22.22% 30 9 TAIR8 Avg. embryo expression (dissected): '330.037'
Avg. embryo expression (LCM): '107.012'
AT1G17440 EER4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.571 x 10-3 46 4 92.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17440 EER4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.7 x 10-5 101 7 93.52% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17440 EER4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 18 5 12 20 78.26% 62.50% 23 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.163088'
Avg. expression score for this sample: '277.078'
Avg. expression score in LCM sample: '67.3458'
Tissue used: 'pure endosperm, no chalazal'
AT1G17440 EER4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.05679 x 10-1 43 12 9 28 78.18% 75.68% 55 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.163088'
Avg. expression score for this sample: '285.169'
Avg. expression score in LCM sample: '67.3458'
Tissue used: 'full endosperm'
AT1G17440 EER4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.27177 x 10-1 9 5 64.29% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.18347 x 10-1 115 27 80.99% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1003 13 98.72% 1016 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.21552 x 10-1 23 13 7 7 63.89% 50.00% 36 14 TAIR8 Avg. embryo expression (dissected): '31.1382'
Avg. embryo expression (LCM): '12.2069'
AT1G17430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.0 x 10-21 233 4 98.31% 237 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 x 10-7 490 112 179 453 81.40% 71.68% 602 632 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.9e-10'
Avg. expression score for this sample: '301.52'
Avg. expression score in LCM sample: '127.24'
Tissue used: 'full endosperm'
AT1G17430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.136 x 10-3 201 74 80 265 73.09% 76.81% 275 345 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.9e-10'
Avg. expression score for this sample: '220.775'
Avg. expression score in LCM sample: '127.24'
Tissue used: 'pure endosperm, no chalazal'
AT1G17420 LOX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159112'
Avg. expression score for this sample: '95.7595'
Avg. expression score in LCM sample: '3.98313'
Tissue used: 'pure endosperm, no chalazal'
AT1G17420 LOX3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.95626 x 10-1 20 4 9 23 83.33% 71.88% 24 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159112'
Avg. expression score for this sample: '128.913'
Avg. expression score in LCM sample: '3.98313'
Tissue used: 'full endosperm'