Displaying data sets 158301 - 158400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G17870 EGY3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 9 10 4 60.87% 28.57% 23 14 TAIR8 Avg. embryo expression (dissected): '25.1173'
Avg. embryo expression (LCM): '.678163'
AT1G17870 EGY3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5372 x 10-2 6 11 35.29% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17870 EGY3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.52 x 10-4 28 1 96.55% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17870 EGY3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-7 66 2 97.06% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.159 x 10-3 299 7 97.71% 306 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.7 x 10-7 362 1 99.72% 363 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.7 x 10-5 49 8 1 38 85.96% 97.44% 57 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-06'
Avg. expression score for this sample: '25.6519'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G17860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.5846 x 10-2 14 4 0 2 77.78% 100.00% 18 2 TAIR8 Avg. embryo expression (dissected): '8.71687'
Avg. embryo expression (LCM): '0'
AT1G17860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.942 x 10-2 7 2 1 24 77.78% 96.00% 9 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-06'
Avg. expression score for this sample: '9.49364'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G17850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 38 24 9 26 61.29% 74.29% 62 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.843962'
Avg. expression score for this sample: '16.5196'
Avg. expression score in LCM sample: '7.92218'
Tissue used: 'pure endosperm, no chalazal'
AT1G17850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.04579 x 10-1 127 112 31 24 53.14% 43.64% 239 55 TAIR8 Avg. embryo expression (dissected): '75.8463'
Avg. embryo expression (LCM): '48.878'
AT1G17850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.28475 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.7272 x 10-2 41 8 83.67% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-5 61 4 93.85% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.98519 x 10-1 48 7 35 48 87.27% 57.83% 55 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.843962'
Avg. expression score for this sample: '21.2843'
Avg. expression score in LCM sample: '7.92218'
Tissue used: 'full endosperm'
AT1G17840 ABCG11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 0.0 1934 136 259 2225 93.43% 89.57% 2070 2484 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '358.161'
Avg. expression score in LCM sample: '197.584'
Tissue used: 'full endosperm'
AT1G17840 ABCG11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.59769 x 10-1 679 755 209 227 47.35% 52.06% 1434 436 TAIR8 Avg. embryo expression (dissected): '337.421'
Avg. embryo expression (LCM): '183.305'
AT1G17840 ABCG11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 2.2 x 10-9 882 219 234 522 80.11% 69.05% 1101 756 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '208.891'
Avg. expression score in LCM sample: '197.584'
Tissue used: 'pure endosperm, no chalazal'
AT1G17840 ABCG11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 5804 51 99.13% 5855 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G17840 ABCG11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1767 37 97.95% 1804 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G17840 ABCG11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 x 10-24 1066 40 96.38% 1106 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G17830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.28176 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.17228 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.66751 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 37 13 19 25 74.00% 56.82% 50 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.752727'
Avg. expression score for this sample: '32.7512'
Avg. expression score in LCM sample: '88.2022'
Tissue used: 'full endosperm'
AT1G17830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.74571 x 10-1 41 8 31 27 83.67% 46.55% 49 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.752727'
Avg. expression score for this sample: '48.5189'
Avg. expression score in LCM sample: '88.2022'
Tissue used: 'pure endosperm, no chalazal'
AT1G17830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.23544 x 10-1 23 26 8 6 46.94% 42.86% 49 14 TAIR8 Avg. embryo expression (dissected): '40.6681'
Avg. embryo expression (LCM): '5.55089'
AT1G17820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.5211 x 10-1 125 83 45 27 60.10% 37.50% 208 72 TAIR8 Avg. embryo expression (dissected): '93.9636'
Avg. embryo expression (LCM): '79.3451'
AT1G17820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.39911 x 10-1 142 41 68 115 77.60% 62.84% 183 183 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024141'
Avg. expression score for this sample: '80.0916'
Avg. expression score in LCM sample: '66.5522'
Tissue used: 'pure endosperm, no chalazal'
AT1G17820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-11 294 35 89.36% 329 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.39183 x 10-1 155 65 70.45% 220 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.22231 x 10-1 20 14 58.82% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7749 x 10-2 191 47 97 192 80.25% 66.44% 238 289 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024141'
Avg. expression score for this sample: '84.0683'
Avg. expression score in LCM sample: '66.5522'
Tissue used: 'full endosperm'
AT1G17810 BETA-TIP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.8 x 10-4 461 295 275 413 60.98% 60.03% 756 688 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000605'
Avg. expression score for this sample: '393.451'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G17810 BETA-TIP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.60239 x 10-1 138 104 15 70 57.02% 82.35% 242 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000605'
Avg. expression score for this sample: '115.975'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G17810 BETA-TIP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.20293 x 10-1 544 591 212 221 47.93% 51.04% 1135 433 TAIR8 Avg. embryo expression (dissected): '1097.96'
Avg. embryo expression (LCM): '59.0379'
AT1G17810 BETA-TIP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.13828 x 10-1 225 117 65.79% 342 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17810 BETA-TIP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.8 x 10-6 15 36 29.41% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17810 BETA-TIP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1034 x 10-2 52 55 48.60% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17800 ENODL22 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 82 24 77.36% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17800 ENODL22 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 27 20.59% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17800 ENODL22 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17800 ENODL22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G17800 ENODL22 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G17800 ENODL22 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G17790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9709 x 10-2 37 35 50 65 51.39% 56.52% 72 115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020855'
Avg. expression score for this sample: '49.4105'
Avg. expression score in LCM sample: '10.8324'
Tissue used: 'pure endosperm, no chalazal'
AT1G17790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4604 x 10-1 41 18 19 17 69.49% 47.22% 59 36 TAIR8 Avg. embryo expression (dissected): '58.3934'
Avg. embryo expression (LCM): '49.1292'
AT1G17790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.8223 x 10-2 14 20 41.18% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3 x 10-11 160 28 85.11% 188 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-10 67 4 94.37% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.86843 x 10-1 71 48 57 101 59.66% 63.92% 119 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020855'
Avg. expression score for this sample: '96.6502'
Avg. expression score in LCM sample: '10.8324'
Tissue used: 'full endosperm'
AT1G17780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.7258 x 10-2 27 10 31 12 72.97% 27.91% 37 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00125'
Avg. expression score for this sample: '20.9321'
Avg. expression score in LCM sample: '25.2363'
Tissue used: 'full endosperm'
AT1G17780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81251 x 10-1 10 8 7 1 55.56% 12.50% 18 8 TAIR8 Avg. embryo expression (dissected): '12.5418'
Avg. embryo expression (LCM): '7.7612'
AT1G17780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.5587 x 10-2 7 6 18 10 53.85% 35.71% 13 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00125'
Avg. expression score for this sample: '12.988'
Avg. expression score in LCM sample: '25.2363'
Tissue used: 'pure endosperm, no chalazal'
AT1G17780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.88167 x 10-1 50 49 50.51% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.94845 x 10-1 350 373 48.41% 723 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.50983 x 10-1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17770 SUVH7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17770 SUVH7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.438 x 10-3 368 213 63.34% 581 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17770 SUVH7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6492 x 10-2 295 254 53.73% 549 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17770 SUVH7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 PEG 6.69921 x 10-1 1 0 6 4 100.00% 40.00% 1 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025449'
Avg. expression score for this sample: '2.28851'
Avg. expression score in LCM sample: '6.3495'
Tissue used: 'full endosperm'
AT1G17770 SUVH7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 PEG 2.5328 x 10-2 2 5 7 1 28.57% 12.50% 7 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.025449'
Avg. expression score for this sample: '3.10204'
Avg. expression score in LCM sample: '6.3495'
Tissue used: 'pure endosperm, no chalazal'
AT1G17770 SUVH7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.13951'
Avg. embryo expression (LCM): '0'
AT1G17760 CSTF77 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.27507 x 10-1 20 58 6 26 25.64% 81.25% 78 32 TAIR8 Avg. embryo expression (dissected): '25.4124'
Avg. embryo expression (LCM): '20.056'
AT1G17760 CSTF77 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.18807 x 10-1 21 19 24 42 52.50% 63.64% 40 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.684618'
Avg. expression score for this sample: '16.7314'
Avg. expression score in LCM sample: '8.93633'
Tissue used: 'pure endosperm, no chalazal'
AT1G17760 CSTF77 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-7 142 18 88.75% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17760 CSTF77 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2 x 10-4 180 40 81.82% 220 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17760 CSTF77 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.4387 x 10-2 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17760 CSTF77 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.97041 x 10-1 58 42 24 116 58.00% 82.86% 100 140 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.684618'
Avg. expression score for this sample: '30.2804'
Avg. expression score in LCM sample: '8.93633'
Tissue used: 'full endosperm'
AT1G17750 PEPR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5468 x 10-2 13 1 3 26 92.86% 89.66% 14 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.03807'
Avg. expression score for this sample: '3.88385'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G17750 PEPR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 2 8 63.64% 80.00% 11 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.03807'
Avg. expression score for this sample: '3.21448'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G17750 PEPR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.28581 x 10-1 26 9 5 4 74.29% 44.44% 35 9 TAIR8 Avg. embryo expression (dissected): '9.12618'
Avg. embryo expression (LCM): '7.81143'
AT1G17750 PEPR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17750 PEPR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.581 x 10-3 98 2 98.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17750 PEPR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.35067 x 10-1 139 23 85.80% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17745 PGDH endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.55912 x 10-1 3777 13 99.66% 3790 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17745 PGDH endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.29056 x 10-1 2927 3 99.90% 2930 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17745 PGDH endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.18151 x 10-1 306 2 99.35% 308 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17745 PGDH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1374 2 1 1306 99.85% 99.92% 1376 1307 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1055.7'
Avg. expression score in LCM sample: '9.37727'
Tissue used: 'full endosperm'
AT1G17745 PGDH embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.64 x 10-4 24 1 0 1 96.00% 100.00% 25 1 TAIR8 Avg. embryo expression (dissected): '37.7119'
Avg. embryo expression (LCM): '2.67498'
AT1G17745 PGDH endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 364 1 1 186 99.73% 99.47% 365 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '403.539'
Avg. expression score in LCM sample: '9.37727'
Tissue used: 'pure endosperm, no chalazal'
AT1G17744 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.04591'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G17744 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G17744 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17744 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 15 0 100.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17744 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17744 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.68007'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G17730 VPS46.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '261.289'
Avg. expression score in LCM sample: '176.11'
Tissue used: 'full endosperm'
AT1G17730 VPS46.1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '303.763'
Avg. embryo expression (LCM): '253.143'
AT1G17730 VPS46.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '327.405'
Avg. expression score in LCM sample: '176.11'
Tissue used: 'pure endosperm, no chalazal'
AT1G17730 VPS46.1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17730 VPS46.1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17730 VPS46.1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17720 ATB BETA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.935 x 10-2 34 3 91.89% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17720 ATB BETA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.6724 x 10-2 112 20 84.85% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17720 ATB BETA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2 x 10-6 165 13 92.70% 178 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G17720 ATB BETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-5 111 51 51 272 68.52% 84.21% 162 323 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.2e-06'
Avg. expression score for this sample: '178.896'
Avg. expression score in LCM sample: '62.231'
Tissue used: 'full endosperm'
AT1G17720 ATB BETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.07417 x 10-1 23 20 11 66 53.49% 85.71% 43 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.2e-06'
Avg. expression score for this sample: '96.3901'
Avg. expression score in LCM sample: '62.231'
Tissue used: 'pure endosperm, no chalazal'
AT1G17720 ATB BETA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.4162 x 10-2 23 54 3 6 29.87% 66.67% 77 9 TAIR8 Avg. embryo expression (dissected): '135.663'
Avg. embryo expression (LCM): '130.948'