Displaying data sets 158101 - 158200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G18220 PUP9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18220 PUP9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18220 PUP9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18220 PUP9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18220 PUP9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18220 PUP9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G18210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '263.244'
Avg. embryo expression (LCM): '144.738'
AT1G18210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '236.34'
Avg. expression score in LCM sample: '46.1955'
Tissue used: 'pure endosperm, no chalazal'
AT1G18210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '418.101'
Avg. expression score in LCM sample: '46.1955'
Tissue used: 'full endosperm'
AT1G18210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18200 RABA6b endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18200 RABA6b endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18200 RABA6b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.86948'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18200 RABA6b endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18200 RABA6b embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.876842'
Avg. embryo expression (LCM): '0'
AT1G18200 RABA6b endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.13823'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18190 GC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.63882 x 10-1 59 23 29 62 71.95% 68.13% 82 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003964'
Avg. expression score for this sample: '366.019'
Avg. expression score in LCM sample: '80.6769'
Tissue used: 'pure endosperm, no chalazal'
AT1G18190 GC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.43174 x 10-1 26 8 76.47% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18190 GC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.21 x 10-4 220 41 84.29% 261 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18190 GC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7005 x 10-1 50 38 6 12 56.82% 66.67% 88 18 TAIR8 Avg. embryo expression (dissected): '306.181'
Avg. embryo expression (LCM): '127.771'
AT1G18190 GC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-15 344 25 93.22% 369 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18190 GC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.525 x 10-3 162 53 68 211 75.35% 75.63% 215 279 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003964'
Avg. expression score for this sample: '471.961'
Avg. expression score in LCM sample: '80.6769'
Tissue used: 'full endosperm'
AT1G18180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.178 x 10-2 195 65 71 154 75.00% 68.44% 260 225 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08095'
Avg. expression score for this sample: '169.331'
Avg. expression score in LCM sample: '86.0857'
Tissue used: 'full endosperm'
AT1G18180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.14587 x 10-1 292 300 112 92 49.32% 45.10% 592 204 TAIR8 Avg. embryo expression (dissected): '431.617'
Avg. embryo expression (LCM): '119.658'
AT1G18180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.326 x 10-3 18 21 46.15% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.90573 x 10-1 175 64 73.22% 239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8 x 10-5 233 53 81.47% 286 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.13668 x 10-1 212 76 133 250 73.61% 65.27% 288 383 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.08095'
Avg. expression score for this sample: '213.684'
Avg. expression score in LCM sample: '86.0857'
Tissue used: 'pure endosperm, no chalazal'
AT1G18170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 3 66.67% 75.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '61.2927'
Avg. expression score in LCM sample: '7.45184'
Tissue used: 'pure endosperm, no chalazal'
AT1G18170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.1875 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1 5 0 0 3 100.00% 100.00% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '39.5654'
Avg. expression score in LCM sample: '7.45184'
Tissue used: 'full endosperm'
AT1G18170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.4614 x 10-2 14 2 2 4 87.50% 66.67% 16 6 TAIR8 Avg. embryo expression (dissected): '158.246'
Avg. embryo expression (LCM): '77.6999'
AT1G18170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.87 x 10-3 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.40353 x 10-1 34 8 80.95% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.09017 x 10-1 24 8 6 19 75.00% 76.00% 32 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.34827'
Avg. expression score for this sample: '74.4102'
Avg. expression score in LCM sample: '30.2042'
Tissue used: 'full endosperm'
AT1G18160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.1 x 10-5 49 0 100.00% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.38188 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 2 0 0 60.00% 5 0 TAIR8 Avg. embryo expression (dissected): '55.2123'
Avg. embryo expression (LCM): '43.3773'
AT1G18160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 1 5 66.67% 83.33% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.34827'
Avg. expression score for this sample: '57.864'
Avg. expression score in LCM sample: '30.2042'
Tissue used: 'pure endosperm, no chalazal'
AT1G18150 ATMPK8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 3 3 4 80.00% 57.14% 15 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089952'
Avg. expression score for this sample: '12.3907'
Avg. expression score in LCM sample: '17.2847'
Tissue used: 'pure endosperm, no chalazal'
AT1G18150 ATMPK8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 15 2 6 40.00% 75.00% 25 8 TAIR8 Avg. embryo expression (dissected): '28.6665'
Avg. embryo expression (LCM): '38.4167'
AT1G18150 ATMPK8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.442 x 10-3 124 15 89.21% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18150 ATMPK8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.70568 x 10-1 83 29 74.11% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18150 ATMPK8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.14735 x 10-1 39 7 21 53 84.78% 71.62% 46 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089952'
Avg. expression score for this sample: '20.023'
Avg. expression score in LCM sample: '17.2847'
Tissue used: 'full endosperm'
AT1G18150 ATMPK8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.67691 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18140 LAC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18140 LAC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18140 LAC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.989471'
Avg. embryo expression (LCM): '0'
AT1G18140 LAC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18140 LAC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.265'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18140 LAC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.33558'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.339004'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G18130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18100 E12A11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3421 x 10-2 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18100 E12A11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0855 x 10-2 262 176 59.82% 438 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18100 E12A11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.41786 x 10-1 6 9 7 15 40.00% 68.18% 15 22 TAIR8 Avg. embryo expression (dissected): '140.431'
Avg. embryo expression (LCM): '0'
AT1G18100 E12A11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18100 E12A11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 172 106 223 484 61.87% 68.46% 278 707 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.403842'
Avg. expression score for this sample: '1612.21'
Avg. expression score in LCM sample: '96.7564'
Tissue used: 'pure endosperm, no chalazal'
AT1G18100 E12A11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.20889 x 10-1 685 419 244 550 62.05% 69.27% 1104 794 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.403842'
Avg. expression score for this sample: '1365.21'
Avg. expression score in LCM sample: '96.7564'
Tissue used: 'full endosperm'
AT1G18090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 7 0 4 53.33% 100.00% 15 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.6324'
Avg. expression score in LCM sample: '3.93904'
Tissue used: 'full endosperm'
AT1G18090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.22672 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.87356 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9416 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 1 0 40.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '21.715'
Avg. embryo expression (LCM): '18.1471'
AT1G18090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 2 60.00% 100.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.3804'
Avg. expression score in LCM sample: '3.93904'
Tissue used: 'pure endosperm, no chalazal'
AT1G18080 ATARCA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 24 15 11 24 61.54% 68.57% 39 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.627163'
Avg. expression score for this sample: '4429.86'
Avg. expression score in LCM sample: '1426.43'
Tissue used: 'pure endosperm, no chalazal'
AT1G18080 ATARCA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.38607 x 10-1 28 28 30 74 50.00% 71.15% 56 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.627163'
Avg. expression score for this sample: '2923.25'
Avg. expression score in LCM sample: '1426.43'
Tissue used: 'full endosperm'
AT1G18080 ATARCA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.74296 x 10-1 46 40 7 9 53.49% 56.25% 86 16 TAIR8 Avg. embryo expression (dissected): '10549.9'
Avg. embryo expression (LCM): '7097.99'
AT1G18080 ATARCA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 18 10 64.29% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18080 ATARCA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.432 x 10-3 103 28 78.63% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18080 ATARCA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0258 x 10-2 69 18 79.31% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18075 MIR159B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18075 MIR159B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18075 MIR159B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G18075 MIR159B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18075 MIR159B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18075 MIR159B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.95598'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '424.982'
Avg. expression score in LCM sample: '217.235'
Tissue used: 'full endosperm'
AT1G18070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '468.416'
Avg. embryo expression (LCM): '465.823'
AT1G18070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '314.613'
Avg. expression score in LCM sample: '217.235'
Tissue used: 'pure endosperm, no chalazal'
AT1G18060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 11 3 12 52.17% 80.00% 23 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.413103'
Avg. expression score for this sample: '71.2998'
Avg. expression score in LCM sample: '20.5918'
Tissue used: 'pure endosperm, no chalazal'
AT1G18060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.21611 x 10-1 35 22 25 39 61.40% 60.94% 57 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.413103'
Avg. expression score for this sample: '125.553'
Avg. expression score in LCM sample: '20.5918'
Tissue used: 'full endosperm'
AT1G18060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.57081 x 10-1 19 37 4 5 33.93% 55.56% 56 9 TAIR8 Avg. embryo expression (dissected): '155.471'
Avg. embryo expression (LCM): '167.192'
AT1G18060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.4453 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2914 x 10-2 25 6 80.65% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.339955'
Avg. embryo expression (LCM): '0'
AT1G18050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'