Displaying data sets 15701 - 15800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G44316 ABCI9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44316 ABCI9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.395 x 10-2 14 23 17 20 37.84% 54.05% 37 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-17'
Avg. expression score for this sample: '112.18'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.1 x 10-16 399 357 452 517 52.78% 53.35% 756 969 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.0e-17'
Avg. expression score for this sample: '1184.57'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.7356 x 10-1 415 479 218 211 46.42% 49.18% 894 429 TAIR8 Avg. embryo expression (dissected): '2949.72'
Avg. embryo expression (LCM): '6.54302'
AT5G44310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.51171 x 10-1 26 34 43.33% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.57967 x 10-1 378 348 52.07% 726 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.315 x 10-3 244 295 45.27% 539 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44306 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44306 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44306 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44306 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44306 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44306 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.38321'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.320226'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.31759'
Avg. embryo expression (LCM): '0'
AT5G44300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 2 3 33.33% 60.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027954'
Avg. expression score for this sample: '104.936'
Avg. expression score in LCM sample: '31.3507'
Tissue used: 'pure endosperm, no chalazal'
AT5G44290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0118 21 3 13 58 87.50% 81.69% 24 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027954'
Avg. expression score for this sample: '200.674'
Avg. expression score in LCM sample: '31.3507'
Tissue used: 'full endosperm'
AT5G44290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14286 x 10-1 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '39.0323'
Avg. embryo expression (LCM): '21.3245'
AT5G44290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.07 x 10-4 15 16 48.39% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.383 x 10-3 97 7 93.27% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5687 x 10-2 89 8 91.75% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44286 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44286 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44286 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44286 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44286 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44286 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44283 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44283 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44283 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44283 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44283 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44283 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44280 RING1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '419.665'
Avg. expression score in LCM sample: '101.724'
Tissue used: 'pure endosperm, no chalazal'
AT5G44280 RING1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 2 4 71.43% 66.67% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '304.876'
Avg. expression score in LCM sample: '101.724'
Tissue used: 'full endosperm'
AT5G44280 RING1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '465.787'
Avg. embryo expression (LCM): '301.657'
AT5G44280 RING1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44280 RING1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44280 RING1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8627 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.565087'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.69127'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44265 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44265 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44265 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G44265 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44265 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44265 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 3 0 2 0.00% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.065611'
Avg. expression score for this sample: '.967271'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G44260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.31473 x 10-1 16 17 6 5 48.48% 45.45% 33 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.065611'
Avg. expression score for this sample: '6.28562'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G44260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.34842 x 10-1 4 1 1 3 80.00% 75.00% 5 4 TAIR8 Avg. embryo expression (dissected): '7.92379'
Avg. embryo expression (LCM): '5.50066'
AT5G44260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.48 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.50721 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 3 0 1 4 100.00% 80.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034565'
Avg. expression score for this sample: '7.34182'
Avg. expression score in LCM sample: '5.96735'
Tissue used: 'pure endosperm, no chalazal'
AT5G44250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.5912 x 10-2 12 3 1 17 80.00% 94.44% 15 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.034565'
Avg. expression score for this sample: '18.5571'
Avg. expression score in LCM sample: '5.96735'
Tissue used: 'full endosperm'
AT5G44250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 4 2 1 50.00% 33.33% 8 3 TAIR8 Avg. embryo expression (dissected): '16.1728'
Avg. embryo expression (LCM): '14.4424'
AT5G44250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0352 x 10-1 18 6 75.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3299 x 10-2 32 0 100.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44240 ALA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7127 x 10-2 103 40 43 149 72.03% 77.60% 143 192 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000038'
Avg. expression score for this sample: '51.5535'
Avg. expression score in LCM sample: '56.4694'
Tissue used: 'pure endosperm, no chalazal'
AT5G44240 ALA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.48 x 10-4 236 62 106 267 79.19% 71.58% 298 373 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000038'
Avg. expression score for this sample: '71.8654'
Avg. expression score in LCM sample: '56.4694'
Tissue used: 'full endosperm'
AT5G44240 ALA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.42879 x 10-1 59 96 22 34 38.06% 60.71% 155 56 TAIR8 Avg. embryo expression (dissected): '51.4614'
Avg. embryo expression (LCM): '40.514'
AT5G44240 ALA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.03044 x 10-1 61 30 67.03% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44240 ALA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.03026 x 10-1 415 140 74.77% 555 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44240 ALA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-30 782 49 94.10% 831 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.87368 x 10-1 13 6 2 12 68.42% 85.71% 19 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060224'
Avg. expression score for this sample: '19.2309'
Avg. expression score in LCM sample: '11.1704'
Tissue used: 'pure endosperm, no chalazal'
AT5G44230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7171 x 10-2 55 10 13 28 84.62% 68.29% 65 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060224'
Avg. expression score for this sample: '22.481'
Avg. expression score in LCM sample: '11.1704'
Tissue used: 'full endosperm'
AT5G44230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.8223 x 10-1 18 20 17 10 47.37% 37.04% 38 27 TAIR8 Avg. embryo expression (dissected): '63.6703'
Avg. embryo expression (LCM): '50.2845'
AT5G44230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.391 x 10-3 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.14839 x 10-1 51 7 87.93% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.38 x 10-4 117 8 93.60% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.15251 x 10-1 10 11 14 30 47.62% 68.18% 21 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.542726'
Avg. expression score for this sample: '28.3359'
Avg. expression score in LCM sample: '16.5646'
Tissue used: 'pure endosperm, no chalazal'
AT5G44220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.07602 x 10-1 24 23 30 72 51.06% 70.59% 47 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.542726'
Avg. expression score for this sample: '42.6486'
Avg. expression score in LCM sample: '16.5646'
Tissue used: 'full endosperm'
AT5G44220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.11392 x 10-1 0 20 0 11 0.00% 100.00% 20 11 TAIR8 Avg. embryo expression (dissected): '22.081'
Avg. embryo expression (LCM): '19.8174'
AT5G44220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.27621 x 10-1 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3916 x 10-2 105 33 76.09% 138 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8 x 10-10 8 43 15.69% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44210 ERF9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 0 2 75.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.4773'
Avg. expression score in LCM sample: '2.76321'
Tissue used: 'pure endosperm, no chalazal'
AT5G44210 ERF9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 1 3 50.00% 75.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.4037'
Avg. expression score in LCM sample: '2.76321'
Tissue used: 'full endosperm'
AT5G44210 ERF9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '18.6318'
Avg. embryo expression (LCM): '13.0107'
AT5G44210 ERF9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.41176 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44210 ERF9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44210 ERF9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.41176 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44200 CBP20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.88812 x 10-1 41 21 16 38 66.13% 70.37% 62 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023315'
Avg. expression score for this sample: '496.372'
Avg. expression score in LCM sample: '159.913'
Tissue used: 'pure endosperm, no chalazal'
AT5G44200 CBP20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1725 x 10-2 78 24 48 154 76.47% 76.24% 102 202 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023315'
Avg. expression score for this sample: '386.03'
Avg. expression score in LCM sample: '159.913'
Tissue used: 'full endosperm'
AT5G44200 CBP20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 37 38 4 6 49.33% 60.00% 75 10 TAIR8 Avg. embryo expression (dissected): '472.652'
Avg. embryo expression (LCM): '427.657'
AT5G44200 CBP20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.72323 x 10-1 36 9 80.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44200 CBP20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.28851 x 10-1 130 39 76.92% 169 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44200 CBP20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.4664 x 10-2 155 36 81.15% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G44190 GLK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.8 x 10-10 92 138 100 105 40.00% 51.22% 230 205 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.9e-26'
Avg. expression score for this sample: '158.739'
Avg. expression score in LCM sample: '57.7775'
Tissue used: 'pure endosperm, no chalazal'
AT5G44190 GLK2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8 x 10-17 107 182 136 119 37.02% 46.67% 289 255 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.9e-26'
Avg. expression score for this sample: '179.076'
Avg. expression score in LCM sample: '57.7775'
Tissue used: 'full endosperm'