Displaying data sets 157701 - 157800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G18830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 154 160 49.04% 314 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G18830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.05961 x 10-1 4 2 14 8 66.67% 36.36% 6 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.197783'
Avg. expression score for this sample: '3.6679'
Avg. expression score in LCM sample: '.514427'
Tissue used: 'full endosperm'
AT1G18830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G18820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.60172'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '14.4161'
Avg. embryo expression (LCM): '8.75333'
AT1G18810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.357621'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18800 NRP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.093783'
Avg. expression score for this sample: '74.7915'
Avg. expression score in LCM sample: '20.0333'
Tissue used: 'pure endosperm, no chalazal'
AT1G18800 NRP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.53049 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18800 NRP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.12 x 10-4 22 1 95.65% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18800 NRP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '126.002'
Avg. embryo expression (LCM): '227.612'
AT1G18800 NRP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.43111 x 10-1 1 1 9 4 50.00% 30.77% 2 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.093783'
Avg. expression score for this sample: '94.1381'
Avg. expression score in LCM sample: '20.0333'
Tissue used: 'full endosperm'
AT1G18800 NRP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.45924 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18790 RKD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18790 RKD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G18790 RKD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.79835'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18790 RKD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18790 RKD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18790 RKD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.541437'
Avg. expression score in LCM sample: '3.01307'
Tissue used: 'full endosperm'
AT1G18780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G18780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.262451'
Avg. expression score in LCM sample: '3.01307'
Tissue used: 'pure endosperm, no chalazal'
AT1G18773 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '63.0617'
Avg. expression score in LCM sample: '17.3582'
Tissue used: 'pure endosperm, no chalazal'
AT1G18773 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.45455 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18773 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18773 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '33.4241'
Avg. embryo expression (LCM): '25.2051'
AT1G18773 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.3904'
Avg. expression score in LCM sample: '17.3582'
Tissue used: 'full endosperm'
AT1G18773 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '27.9333'
Avg. embryo expression (LCM): '27.5535'
AT1G18770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '577.406'
Avg. expression score in LCM sample: '774.066'
Tissue used: 'full endosperm'
AT1G18770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '842.443'
Avg. expression score in LCM sample: '774.066'
Tissue used: 'pure endosperm, no chalazal'
AT1G18770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.67986 x 10-1 51 4 92.73% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0226 x 10-2 3 0 0 8 100.00% 100.00% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043382'
Avg. expression score for this sample: '2.78904'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.8823 x 10-2 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.85867'
AT1G18760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 4 0 0 1 100.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043382'
Avg. expression score for this sample: '1.90825'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18750 AGL65 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.747527'
Avg. expression score for this sample: '8.24926'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18750 AGL65 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1952 x 10-2 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18750 AGL65 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.20266 x 10-1 14 5 73.68% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18750 AGL65 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.49845 x 10-1 1 5 3 1 16.67% 25.00% 6 4 TAIR8 Avg. embryo expression (dissected): '22.5638'
Avg. embryo expression (LCM): '7.57282'
AT1G18750 AGL65 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.28282 x 10-1 4 5 3 5 44.44% 62.50% 9 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.747527'
Avg. expression score for this sample: '12.039'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18750 AGL65 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.52964 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.39466 x 10-1 34 6 85.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 16 0 5 38.46% 100.00% 26 5 TAIR8 Avg. embryo expression (dissected): '151.357'
Avg. embryo expression (LCM): '33.1798'
AT1G18740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.49 x 10-4 139 55 90 333 71.65% 78.72% 194 423 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001361'
Avg. expression score for this sample: '830.051'
Avg. expression score in LCM sample: '34.0551'
Tissue used: 'full endosperm'
AT1G18740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.01893 x 10-1 57 24 27 38 70.37% 58.46% 81 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001361'
Avg. expression score for this sample: '432.05'
Avg. expression score in LCM sample: '34.0551'
Tissue used: 'pure endosperm, no chalazal'
AT1G18740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-6 98 8 92.45% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9269 x 10-2 79 14 84.95% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18735 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18735 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.87179 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '22.7169'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G18735 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18735 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '147.122'
Avg. embryo expression (LCM): '264.396'
AT1G18735 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '74.6558'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G18730 PnsB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.89294 x 10-1 19 5 4 5 79.17% 55.56% 24 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38369'
Avg. expression score for this sample: '177.23'
Avg. expression score in LCM sample: '19.1661'
Tissue used: 'pure endosperm, no chalazal'
AT1G18730 PnsB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.22819 x 10-1 8 10 22 29 44.44% 56.86% 18 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38369'
Avg. expression score for this sample: '136.149'
Avg. expression score in LCM sample: '19.1661'
Tissue used: 'full endosperm'
AT1G18730 PnsB4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.79121 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18730 PnsB4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.03858 x 10-1 13 7 65.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18730 PnsB4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.57057 x 10-1 11 2 2 2 84.62% 50.00% 13 4 TAIR8 Avg. embryo expression (dissected): '124.124'
Avg. embryo expression (LCM): '103.746'
AT1G18730 PnsB4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.07767 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.2082 x 10-2 18 4 81.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '254.742'
Avg. embryo expression (LCM): '129.868'
AT1G18720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.82043 x 10-1 7 0 1 2 100.00% 66.67% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-09'
Avg. expression score for this sample: '421.464'
Avg. expression score in LCM sample: '140.674'
Tissue used: 'pure endosperm, no chalazal'
AT1G18720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 151 9 94.38% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.8 x 10-9 41 2 5 81 95.35% 94.19% 43 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-09'
Avg. expression score for this sample: '1130.52'
Avg. expression score in LCM sample: '140.674'
Tissue used: 'full endosperm'
AT1G18720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7553 x 10-2 121 21 85.21% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18710 MYB47 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.78788 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18710 MYB47 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.062 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18710 MYB47 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 2 6 8 66.67% 57.14% 6 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.65148'
Avg. expression score for this sample: '36.2439'
Avg. expression score in LCM sample: '64.5385'
Tissue used: 'full endosperm'
AT1G18710 MYB47 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.5966'
Avg. embryo expression (LCM): '0'
AT1G18710 MYB47 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.14799 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18710 MYB47 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.54622 x 10-1 8 5 4 5 61.54% 55.56% 13 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.65148'
Avg. expression score for this sample: '49.7031'
Avg. expression score in LCM sample: '64.5385'
Tissue used: 'pure endosperm, no chalazal'
AT1G18700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.132391'
Avg. expression score for this sample: '123.641'
Avg. expression score in LCM sample: '52.354'
Tissue used: 'pure endosperm, no chalazal'
AT1G18700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.32391 x 10-1 9 1 1 11 90.00% 91.67% 10 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.132391'
Avg. expression score for this sample: '134.615'
Avg. expression score in LCM sample: '52.354'
Tissue used: 'full endosperm'
AT1G18700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.59511 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3913 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '146.962'
Avg. embryo expression (LCM): '85.75'
AT1G18690 XXT4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 3 1 2 57.14% 66.67% 7 3 TAIR8 Avg. embryo expression (dissected): '45.6796'
Avg. embryo expression (LCM): '28.2442'
AT1G18690 XXT4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.40036 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18690 XXT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.68582 x 10-1 8 0 1 6 100.00% 85.71% 8 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.206248'
Avg. expression score for this sample: '27.7808'
Avg. expression score in LCM sample: '18.1519'
Tissue used: 'pure endosperm, no chalazal'
AT1G18690 XXT4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.84345 x 10-1 45 5 90.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G18690 XXT4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.33684 x 10-1 19 6 5 12 76.00% 70.59% 25 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.206248'
Avg. expression score for this sample: '49.4107'
Avg. expression score in LCM sample: '18.1519'
Tissue used: 'full endosperm'
AT1G18690 XXT4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.96226 x 10-1 28 4 87.50% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'