Displaying data sets 157401 - 157500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G19310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.1718'
Avg. expression score in LCM sample: '2.822'
Tissue used: 'pure endosperm, no chalazal'
AT1G19300 PARVUS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.823'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19300 PARVUS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19300 PARVUS endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19300 PARVUS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.7223'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19300 PARVUS endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19300 PARVUS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '34.0198'
Avg. embryo expression (LCM): '6.63093'
AT1G19290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 44 39 18 12 53.01% 40.00% 83 30 TAIR8 Avg. embryo expression (dissected): '94.1556'
Avg. embryo expression (LCM): '65.2418'
AT1G19290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.83654 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6475 x 10-2 42 9 82.35% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-9 93 4 95.88% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.46661 x 10-1 29 13 16 42 69.05% 72.41% 42 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.546576'
Avg. expression score for this sample: '45.3771'
Avg. expression score in LCM sample: '12.4491'
Tissue used: 'pure endosperm, no chalazal'
AT1G19290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.54473 x 10-1 58 34 32 86 63.04% 72.88% 92 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.546576'
Avg. expression score for this sample: '89.1663'
Avg. expression score in LCM sample: '12.4491'
Tissue used: 'full endosperm'
AT1G19270 DA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '63.1551'
Avg. expression score in LCM sample: '28.3229'
Tissue used: 'full endosperm'
AT1G19270 DA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19270 DA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.5974'
Avg. embryo expression (LCM): '24.7404'
AT1G19270 DA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '42.3429'
Avg. expression score in LCM sample: '28.3229'
Tissue used: 'pure endosperm, no chalazal'
AT1G19270 DA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19270 DA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.156715'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G19260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19250 FMO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19250 FMO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.427837'
Avg. embryo expression (LCM): '0'
AT1G19250 FMO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19250 FMO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19250 FMO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19250 FMO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.207963'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3264 x 10-2 79 2 21 22 97.53% 51.16% 81 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.03679'
Avg. expression score for this sample: '64.0033'
Avg. expression score in LCM sample: '33.0115'
Tissue used: 'full endosperm'
AT1G19240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.01601 x 10-1 53 29 5 4 64.63% 44.44% 82 9 TAIR8 Avg. embryo expression (dissected): '76.5035'
Avg. embryo expression (LCM): '103.407'
AT1G19240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0032 6 9 40.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2 x 10-5 60 52 53.57% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.314 x 10-3 173 20 89.64% 193 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 4 10 13 78.95% 56.52% 19 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.03679'
Avg. expression score for this sample: '29.3934'
Avg. expression score in LCM sample: '33.0115'
Tissue used: 'pure endosperm, no chalazal'
AT1G19230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.0215 x 10-2 6 2 0 15 75.00% 100.00% 8 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-12'
Avg. expression score for this sample: '11.8462'
Avg. expression score in LCM sample: '2.45455'
Tissue used: 'pure endosperm, no chalazal'
AT1G19230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.54566 x 10-1 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.371 x 10-3 77 3 96.25% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-11 136 43 27 274 75.98% 91.03% 179 301 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-12'
Avg. expression score for this sample: '114.563'
Avg. expression score in LCM sample: '2.45455'
Tissue used: 'full endosperm'
AT1G19230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 24 4 85.71% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '3.4335'
Avg. embryo expression (LCM): '1.68285'
AT1G19220 ARF19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.34933 x 10-1 105 97 51 47 51.98% 47.96% 202 98 TAIR8 Avg. embryo expression (dissected): '196.038'
Avg. embryo expression (LCM): '93.4484'
AT1G19220 ARF19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.83706 x 10-1 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19220 ARF19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.59665 x 10-1 64 25 71.91% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19220 ARF19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.399 x 10-3 96 20 82.76% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19220 ARF19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.18669 x 10-1 76 38 31 31 66.67% 50.00% 114 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.784696'
Avg. expression score for this sample: '74.2354'
Avg. expression score in LCM sample: '28.3817'
Tissue used: 'pure endosperm, no chalazal'
AT1G19220 ARF19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.23248 x 10-1 93 51 37 129 64.58% 77.71% 144 166 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.784696'
Avg. expression score for this sample: '78.8839'
Avg. expression score in LCM sample: '28.3817'
Tissue used: 'full endosperm'
AT1G19210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.71261 x 10-1 13 3 7 20 81.25% 74.07% 16 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.540952'
Avg. expression score for this sample: '81.195'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G19210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '21.6388'
Avg. embryo expression (LCM): '12.4204'
AT1G19210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.2673 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 4 1 2 66.67% 66.67% 12 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.540952'
Avg. expression score for this sample: '49.1237'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G19210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.7112 x 10-2 9 10 47.37% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.7693'
Avg. expression score in LCM sample: '2.01361'
Tissue used: 'pure endosperm, no chalazal'
AT1G19200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.5908'
Avg. embryo expression (LCM): '0'
AT1G19200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '191.997'
Avg. expression score in LCM sample: '2.01361'
Tissue used: 'full endosperm'
AT1G19200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 2 4 75.00% 66.67% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00143'
Avg. expression score for this sample: '1307.32'
Avg. expression score in LCM sample: '88.114'
Tissue used: 'pure endosperm, no chalazal'
AT1G19190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.25298 x 10-1 43 0 100.00% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.96556 x 10-1 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.69 x 10-4 21 0 1 21 100.00% 95.45% 21 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00143'
Avg. expression score for this sample: '4877.82'
Avg. expression score in LCM sample: '88.114'
Tissue used: 'full endosperm'
AT1G19190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '160.758'
Avg. embryo expression (LCM): '0'
AT1G19180 JAZ1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 2 1 50.00% 33.33% 2 3 TAIR8 Avg. embryo expression (dissected): '356.666'
Avg. embryo expression (LCM): '40.6898'
AT1G19180 JAZ1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.4 x 10-13 80 13 11 179 86.02% 94.21% 93 190 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.1e-12'
Avg. expression score for this sample: '2183.63'
Avg. expression score in LCM sample: '59.8058'
Tissue used: 'full endosperm'
AT1G19180 JAZ1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.29928 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19180 JAZ1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5969 x 10-2 68 1 98.55% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19180 JAZ1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.134 x 10-3 132 3 97.78% 135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19180 JAZ1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 3 3 6 66.67% 66.67% 9 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.1e-12'
Avg. expression score for this sample: '605.71'
Avg. expression score in LCM sample: '59.8058'
Tissue used: 'pure endosperm, no chalazal'
AT1G19170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 24 16 9 29 60.00% 76.32% 40 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.303712'
Avg. expression score for this sample: '52.846'
Avg. expression score in LCM sample: '50.0758'
Tissue used: 'pure endosperm, no chalazal'
AT1G19170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-5 106 10 91.38% 116 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0037 x 10-2 75 14 84.27% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.00801 x 10-1 45 11 27 60 80.36% 68.97% 56 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.303712'
Avg. expression score for this sample: '49.3891'
Avg. expression score in LCM sample: '50.0758'
Tissue used: 'full endosperm'
AT1G19170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.68097 x 10-1 23 25 10 3 47.92% 23.08% 48 13 TAIR8 Avg. embryo expression (dissected): '49.8651'
Avg. embryo expression (LCM): '29.9522'
AT1G19170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.01001 x 10-1 15 4 78.95% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.46462'
Avg. expression score in LCM sample: '5.58521'
Tissue used: 'pure endosperm, no chalazal'
AT1G19160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.827912'
Avg. embryo expression (LCM): '0'
AT1G19160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.03758'
Avg. expression score in LCM sample: '5.58521'
Tissue used: 'full endosperm'
AT1G19150 Lhca6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '32.1726'
Avg. expression score in LCM sample: '18.3724'
Tissue used: 'full endosperm'
AT1G19150 Lhca6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '188.804'
Avg. embryo expression (LCM): '80.9024'
AT1G19150 Lhca6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19150 Lhca6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.5052'
Avg. expression score in LCM sample: '18.3724'
Tissue used: 'pure endosperm, no chalazal'
AT1G19150 Lhca6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19150 Lhca6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G19140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '77.4742'
Avg. expression score in LCM sample: '18.6957'
Tissue used: 'pure endosperm, no chalazal'
AT1G19140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '52.6551'
Avg. embryo expression (LCM): '71.3829'
AT1G19140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '124.148'
Avg. expression score in LCM sample: '18.6957'
Tissue used: 'full endosperm'
AT1G19140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'